Jatropha Genome Database

JcCA0308831.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0308831.20 + phase: 0 
         (122 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g049560.1 Strictosidine synthase; TolB, C-terminal ch...   129   4e-31
IMGA|Medtr2g049530.1 Strictosidine synthase; TolB, C-terminal ch...   127   1e-30
IMGA|Medtr2g049570.1 Strictosidine synthase; TolB, C-terminal ch...   119   3e-28
IMGA|Medtr8g088510.1 Strictosidine synthase; TolB, C-terminal ch...    50   3e-07
IMGA|Medtr8g088630.1 Strictosidine synthase; TolB, C-terminal ch...    50   3e-07
IMGA|Medtr8g088590.1 ABC transporter related chr08_pseudomolecul...    45   9e-06

>IMGA|Medtr2g049560.1 Strictosidine synthase; TolB, C-terminal
           chr02_pseudomolecule_IMGAG_V3 13575491-13579530 E
           EGN_Mt090430 20090702
          Length = 352

 Score =  129 bits (324), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 60/93 (64%), Positives = 72/93 (77%)

Query: 28  PISPDLLELPPATSLPTNKRLQEVIRLGEGTLEGPEDVCVDRDGVLYTASRDGWIKRLHS 87
           PI P  LE+P + S   N +LQ VI+LGEG L+ PEDVCVD+DGVLYTA+RDGWIKR+  
Sbjct: 24  PIDPVSLEIPFSVSSTKNNQLQSVIKLGEGFLKQPEDVCVDKDGVLYTATRDGWIKRMVR 83

Query: 88  NGTWDNWKKIDSNGLLGITISKEGGLIVCDAEM 120
           N  W+NWK IDS+ LLGIT SK+GGLIVCD  +
Sbjct: 84  NENWENWKHIDSSSLLGITTSKDGGLIVCDTTL 116


>IMGA|Medtr2g049530.1 Strictosidine synthase; TolB, C-terminal
           chr02_pseudomolecule_IMGAG_V3 13555691-13560610 E
           EGN_Mt090430 20090702
          Length = 360

 Score =  127 bits (319), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 62/94 (65%), Positives = 75/94 (79%), Gaps = 3/94 (3%)

Query: 28  PISPDLLELPPATSLPT---NKRLQEVIRLGEGTLEGPEDVCVDRDGVLYTASRDGWIKR 84
           PI P +LE+P A S  +   N +LQ VI+LGEG L+ PEDVCVD+DG+LYTA+RDGWIKR
Sbjct: 28  PIDPVILEIPSAASSTSSTKNNQLQNVIKLGEGFLKQPEDVCVDKDGILYTATRDGWIKR 87

Query: 85  LHSNGTWDNWKKIDSNGLLGITISKEGGLIVCDA 118
           +  NG W+NWK IDS+ LLGIT SK+GGLIVCDA
Sbjct: 88  MVRNGNWENWKHIDSSSLLGITTSKDGGLIVCDA 121


>IMGA|Medtr2g049570.1 Strictosidine synthase; TolB, C-terminal
           chr02_pseudomolecule_IMGAG_V3 13581903-13585508 E
           EGN_Mt090430 20090702
          Length = 372

 Score =  119 bits (299), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 60/95 (63%), Positives = 73/95 (76%), Gaps = 3/95 (3%)

Query: 28  PISPDLLELPPATSL---PTNKRLQEVIRLGEGTLEGPEDVCVDRDGVLYTASRDGWIKR 84
           PI P +LE+P + S      N +LQ VI+LGEG L+ PEDVCVD++GVLYTA+RDGWIKR
Sbjct: 40  PIDPVILEIPSSASSPSSTKNNQLQNVIKLGEGFLKQPEDVCVDKNGVLYTATRDGWIKR 99

Query: 85  LHSNGTWDNWKKIDSNGLLGITISKEGGLIVCDAE 119
           +  N  W+NWK IDS+ LLGIT SK+GGLIVCDA 
Sbjct: 100 MVRNENWENWKHIDSSSLLGITTSKDGGLIVCDAS 134


>IMGA|Medtr8g088510.1 Strictosidine synthase; TolB, C-terminal
           chr08_pseudomolecule_IMGAG_V3 18777233-18774677 E
           EGN_Mt090430 20090702
          Length = 375

 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 5/69 (7%)

Query: 54  LGEGTLEGPEDVCVDRD-GVLYTASRDGWIKRLHSNGT-WDNWKKIDSNGL-LGITISKE 110
           + +G L GPED+  D D G++YT   DGWIKR+  NG+  ++W  I++ G  LG+     
Sbjct: 71  VADGELFGPEDLVYDADKGLMYTGCEDGWIKRISVNGSVVEDW--INTGGRPLGLAFDGN 128

Query: 111 GGLIVCDAE 119
           G LI+ DA+
Sbjct: 129 GQLIIADAD 137


>IMGA|Medtr8g088630.1 Strictosidine synthase; TolB, C-terminal
           chr08_pseudomolecule_IMGAG_V3 18812317-18808704 E
           EGN_Mt090430 20090702
          Length = 375

 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 5/69 (7%)

Query: 54  LGEGTLEGPEDVCVDRD-GVLYTASRDGWIKRLHSNGT-WDNWKKIDSNGL-LGITISKE 110
           + +G L GPED+  D D G++YT   DGWIKR+  NG+  ++W  I++ G  LG+     
Sbjct: 71  VADGELFGPEDLVYDADKGLMYTGCEDGWIKRISVNGSVVEDW--INTGGRPLGLAFDGN 128

Query: 111 GGLIVCDAE 119
           G LI+ DA+
Sbjct: 129 GQLIIADAD 137


>IMGA|Medtr8g088590.1 ABC transporter related
           chr08_pseudomolecule_IMGAG_V3 18791853-18789526 E
           EGN_Mt090430 20090702
          Length = 190

 Score = 45.1 bits (105), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 10/79 (12%)

Query: 48  LQEVIRLG-----EGTLEGPEDVCVDRD-GVLYTASRDGWIKRLHSN-GTWDNWKKIDSN 100
           L + +RLG     EG + GPED+  D   GV+YT   DGWIKR+  N    ++W  +++ 
Sbjct: 60  LNKNMRLGSEKAAEGQVLGPEDLVYDAALGVVYTGCEDGWIKRITVNESVVEDW--VNTG 117

Query: 101 GL-LGITISKEGGLIVCDA 118
           G  LG+     G LIV DA
Sbjct: 118 GRPLGLAFDGNGDLIVADA 136