Jatropha Genome Database

JcCA0308681.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0308681.30 + phase: 2 /partial
         (340 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g148810.1 YjeF-related protein, N-terminal; Pyridoxam...   524   e-149

>IMGA|Medtr3g148810.1 YjeF-related protein, N-terminal; Pyridoxamine
           5-phosphate oxidase, FMN-binding
           chr03_pseudomolecule_IMGAG_V3 38760438-38767109 E
           EGN_Mt090430 20090702
          Length = 467

 Score =  524 bits (1350), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 246/304 (80%), Positives = 275/304 (90%), Gaps = 1/304 (0%)

Query: 38  NPESISYLRQREAAEIDEMLMGPLGFSVDQLMELAGLSVATSIEEVYKPSEYNRVLAICG 97
           + +S++YL+Q+EA EIDE LMGPLGFSVDQLMELAGLSVATSI EVYKP EY+RVL ICG
Sbjct: 5   DSDSVTYLKQQEAVEIDETLMGPLGFSVDQLMELAGLSVATSIYEVYKPGEYSRVLTICG 64

Query: 98  PGNNGGDGLVAARHLHHFGYKPVICYPKRTAKQLYTGLVTQLESLSVPFLAVEDLPLDLS 157
           PGNNGGDGLVAARHLHHFGYKP++CYPKRT K LY GLVTQLE+LS+PFL+VEDLP D S
Sbjct: 65  PGNNGGDGLVAARHLHHFGYKPLVCYPKRTPKPLYAGLVTQLEALSIPFLSVEDLPSDFS 124

Query: 158 KDFDILVDAMFGFSFHGAPRPPFDDLIQKLVYL-HKCNEVHEKRSVVVSIDIPSGWHVEE 216
           KDFDILVDAMFGFSFHG+PRPPFDDLIQ+ + L +  N++ +KR V+VS+DIPSGWHVEE
Sbjct: 125 KDFDILVDAMFGFSFHGSPRPPFDDLIQRFISLRNNHNQIGQKRPVIVSVDIPSGWHVEE 184

Query: 217 GDVGGEGIKPDMLVSLTAPKLCAKKFSGPHHFLGGRFIPPIIVEKFKLHLPPYPGTSMCV 276
           GDV G GIK DML+SLTAPK CAKKF GPHHFLGGRF+PP I EK+KL LPPYPGTSMCV
Sbjct: 185 GDVNGTGIKSDMLISLTAPKFCAKKFRGPHHFLGGRFVPPAIAEKYKLILPPYPGTSMCV 244

Query: 277 RIGKPPQIDMSALRENYISPEFLEEQVEANPIDQFRKWFDDAVVAGLKEPNAMCLSTVGK 336
           RIGKPPQID+SALRENYISPEFLE+QVEA+PI+QFRKWFDDA+ A LKEPNAM LSTVGK
Sbjct: 245 RIGKPPQIDISALRENYISPEFLEDQVEADPINQFRKWFDDALAASLKEPNAMALSTVGK 304

Query: 337 DGKP 340
           DGKP
Sbjct: 305 DGKP 308