Jatropha Genome Database

JcCA0308681.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0308681.20 + phase: 0 /partial
         (156 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g074690.1 hypothetical protein chr05_pseudomolecule_I...   229   4e-61
IMGA|Medtr5g034080.1 Protein of unknown function DUF341 chr05_ps...   189   6e-49
IMGA|Medtr7g104240.1 Protein of unknown function DUF341 chr07_ps...   159   7e-40

>IMGA|Medtr5g074690.1 hypothetical protein
           chr05_pseudomolecule_IMGAG_V3 26999850-27001442 F
           EGN_Mt090430 20090702
          Length = 227

 Score =  229 bits (585), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 108/143 (75%), Positives = 124/143 (86%)

Query: 1   EFTEYTNFDECLAYIEDFMINHGPFDGLLGFSQGAILSAGLAGLQAKGVALKNVPKIKFL 60
           EFTEYTNFDECL YIED+MI HGPFDGLLGFSQGAILS GL GLQ KGVAL  VPK+KFL
Sbjct: 74  EFTEYTNFDECLQYIEDYMIKHGPFDGLLGFSQGAILSGGLPGLQEKGVALTKVPKVKFL 133

Query: 61  IIIGGAKFKSPSVAEKAYASPIQCASIHFLGETDFLKPHGLELLESFVEPVVIHHPKGHT 120
           IIIGGAKF++PSV EKAY+S I C S+HFLGE DFLK +G EL++S VEPVVIHHPKGHT
Sbjct: 134 IIIGGAKFRAPSVVEKAYSSQIGCPSLHFLGEHDFLKEYGKELIDSCVEPVVIHHPKGHT 193

Query: 121 IPRLDETSQETMLSFIKKIENTL 143
           +PRLD+ S  TM+SFI++I+N +
Sbjct: 194 VPRLDDKSLNTMMSFIERIQNDI 216


>IMGA|Medtr5g034080.1 Protein of unknown function DUF341
           chr05_pseudomolecule_IMGAG_V3 13948935-13946850 E
           EGN_Mt090430 20090702
          Length = 227

 Score =  189 bits (479), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 89/147 (60%), Positives = 111/147 (75%), Gaps = 5/147 (3%)

Query: 2   FTEYTNFDECLAYIEDFMINHGPFDGLLGFSQGAILSAGLAGLQAKGVALKNVPKIKFLI 61
           FTEY NF+ECLAYIED+M+ +GPFDG+LGFSQGA L+A L G+QA+G AL+ + KIKFLI
Sbjct: 74  FTEYRNFEECLAYIEDYMLKNGPFDGVLGFSQGAFLAAALPGMQAQGAALQKISKIKFLI 133

Query: 62  IIGGAKF-----KSPSVAEKAYASPIQCASIHFLGETDFLKPHGLELLESFVEPVVIHHP 116
           +I GAKF      +P +A  A++ PI C S+H +G+ DFLKP  + L E FV+PVVIHHP
Sbjct: 134 LISGAKFGGMNYGTPKLASNAFSKPIDCPSLHIIGDMDFLKPESIILREGFVDPVVIHHP 193

Query: 117 KGHTIPRLDETSQETMLSFIKKIENTL 143
           KGHTIPRLDE S  TML FI  I+  +
Sbjct: 194 KGHTIPRLDEKSLPTMLGFINTIQGMI 220


>IMGA|Medtr7g104240.1 Protein of unknown function DUF341
           chr07_pseudomolecule_IMGAG_V3 23587380-23589417 E
           EGN_Mt090430 20090702
          Length = 257

 Score =  159 bits (401), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 73/139 (52%), Positives = 101/139 (72%)

Query: 1   EFTEYTNFDECLAYIEDFMINHGPFDGLLGFSQGAILSAGLAGLQAKGVALKNVPKIKFL 60
           +FT YTN DEC++Y+ +++I +GPFDG LGFSQGA LSA L G QA+G  LK  P IKFL
Sbjct: 73  DFTVYTNLDECISYLTEYIIANGPFDGFLGFSQGATLSALLIGYQAQGKLLKEHPPIKFL 132

Query: 61  IIIGGAKFKSPSVAEKAYASPIQCASIHFLGETDFLKPHGLELLESFVEPVVIHHPKGHT 120
           + I G+KF+ PS+ + AY  PI+  S+HF+GE D+LK    EL  +F +P++I HP+GHT
Sbjct: 133 VSISGSKFRDPSICDVAYKDPIKAKSVHFIGEKDWLKIPSEELASAFDKPLIIRHPQGHT 192

Query: 121 IPRLDETSQETMLSFIKKI 139
           +PRLDE S   + +F+ +I
Sbjct: 193 VPRLDEVSTGQLQNFVAEI 211