Jatropha Genome Database

JcCA0308501.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0308501.10 - phase: 0 
         (327 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g110030.1 Aspartate/other aminotransferase; ; chr04_p...   320   6e-88
IMGA|Medtr4g110010.1 Aspartate/other aminotransferase; chr04_pse...   302   1e-82
IMGA|Medtr4g012240.1 Aspartate/other aminotransferase; chr04_pse...   101   6e-22

>IMGA|Medtr4g110030.1 Aspartate/other aminotransferase; ;
           chr04_pseudomolecule_IMGAG_V3 24784975-24779539 E
           EGN_Mt090430 20090702
          Length = 424

 Score =  320 bits (820), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 146/301 (48%), Positives = 208/301 (69%), Gaps = 1/301 (0%)

Query: 19  QVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVAWSEYRYYDPK 78
           ++A VQ LSGTG+ RL A   +R+ P  ++ I  PTW NH NI+ DA V    YRYY P+
Sbjct: 118 RIAAVQALSGTGACRLFAVFQQRFHPNTQIYIPVPTWSNHHNIWRDAGVPIKTYRYYHPE 177

Query: 79  TVGLDFEGMISDIKAAPEGSFILLHGCAHNPTGIDPTPEQWEMIADVIQEKNHIPFFDVA 138
           + GLDF G++ DIK AP+GSF LLH CAHNPTG+DP+ EQW  I+   + K H P FD+A
Sbjct: 178 SKGLDFSGLMDDIKNAPDGSFFLLHACAHNPTGVDPSEEQWREISSQFKAKGHFPLFDMA 237

Query: 139 YQGFASGSLDADAASVRLFAARGMELLVAQSYSKNLGLYAERIGAINVVCSSADAAARVK 198
           YQGFASG+ + D  ++R+F   G  L +AQSY+KN+GLY +R+G ++++C     A  VK
Sbjct: 238 YQGFASGNPERDVKAIRIFVDDGHLLGLAQSYAKNMGLYGQRVGCLSLLCEDQKQAVAVK 297

Query: 199 SQLKRLARPMYSNPPVHGARIVANVVGDPTLFNEWKAEMEMMAGRIKGVRQKLFDSLSAK 258
           SQL+ ++RPMYSNPP+HGA +V+ V+ DP L   W  E+++MA RI G+R  L ++L   
Sbjct: 298 SQLQLISRPMYSNPPLHGALVVSTVLSDPDLKKLWLKEVKVMADRIIGMRTTLRENLENL 357

Query: 259 DKSGKDWSFILKQIGMFSFTGLSKTQSENMTNKWHVYMTKDGRISLAGLSLAKCEYLADA 318
             S   W+ I  QIGMF ++G++  Q + +T+++H+YMT++GRIS+AGL+     Y+A+A
Sbjct: 358 G-SPLPWNHITNQIGMFCYSGMTPEQVDRLTSEFHIYMTRNGRISMAGLNTGNVGYVANA 416

Query: 319 I 319
           I
Sbjct: 417 I 417


>IMGA|Medtr4g110010.1 Aspartate/other aminotransferase;
           chr04_pseudomolecule_IMGAG_V3 24776278-24772701 E
           EGN_Mt090430 20090702
          Length = 414

 Score =  302 bits (774), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 142/301 (47%), Positives = 204/301 (67%), Gaps = 7/301 (2%)

Query: 19  QVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVAWSEYRYYDPK 78
           ++A VQ LSGTG+ RL AA  +R+ P  ++ +   TW        DA V    +RYY P+
Sbjct: 114 RIAAVQALSGTGACRLFAAFQQRFHPKTQIYMPVLTWAK------DAGVPIKTFRYYHPE 167

Query: 79  TVGLDFEGMISDIKAAPEGSFILLHGCAHNPTGIDPTPEQWEMIADVIQEKNHIPFFDVA 138
           + GLDF G++ DIK AP+GSF LLH CAHNPTG+DP+ EQW  I+   + K H P FD+A
Sbjct: 168 SKGLDFPGLMVDIKNAPDGSFFLLHACAHNPTGVDPSEEQWREISSQFKAKGHFPLFDMA 227

Query: 139 YQGFASGSLDADAASVRLFAARGMELLVAQSYSKNLGLYAERIGAINVVCSSADAAARVK 198
           YQGFASG  + DA ++R+F      + VAQSY+KN+GLY +R+G ++++C +   A  VK
Sbjct: 228 YQGFASGDPERDAKAIRIFLNDSHLIGVAQSYAKNMGLYGQRVGCLSLLCENEKQAVAVK 287

Query: 199 SQLKRLARPMYSNPPVHGARIVANVVGDPTLFNEWKAEMEMMAGRIKGVRQKLFDSLSAK 258
           SQL+ +ARPMYSNPP+HGA +++ V+GDP L   W  E+++MA RI G+R  L ++L   
Sbjct: 288 SQLQLIARPMYSNPPLHGALVISTVLGDPELKKLWLKEVKVMADRIIGMRTALRENLE-N 346

Query: 259 DKSGKDWSFILKQIGMFSFTGLSKTQSENMTNKWHVYMTKDGRISLAGLSLAKCEYLADA 318
             S   W+ I  QIGMF ++G++  Q + +TN++H+YMT+ GRIS+AGL+ +   Y+A+A
Sbjct: 347 LGSPLPWNHITNQIGMFCYSGMTPEQVDRLTNEFHIYMTRSGRISMAGLNTSNVGYVANA 406

Query: 319 I 319
           I
Sbjct: 407 I 407


>IMGA|Medtr4g012240.1 Aspartate/other aminotransferase;
           chr04_pseudomolecule_IMGAG_V3 2030950-2028080 E
           EGN_Mt090430 20090702
          Length = 81

 Score =  101 bits (251), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 46/53 (86%), Positives = 50/53 (94%)

Query: 197 VKSQLKRLARPMYSNPPVHGARIVANVVGDPTLFNEWKAEMEMMAGRIKGVRQ 249
           VKSQLKRLARPMYSNPPVHGARIVAN+VG P LF+EWKAEMEMMAGRIK V++
Sbjct: 24  VKSQLKRLARPMYSNPPVHGARIVANIVGTPALFDEWKAEMEMMAGRIKTVKR 76