Jatropha Genome Database

JcCA0308421.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0308421.20 + phase: 0 /partial
         (210 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g133370.1 NAD(P) transhydrogenase, alpha subunit; Sac...   314   2e-86
IMGA|Medtr8g133370.2 NAD(P) transhydrogenase, alpha subunit; Sac...   314   2e-86

>IMGA|Medtr8g133370.1 NAD(P) transhydrogenase, alpha subunit;
           Saccharopine dehydrogenase; LOR/SDH bifunctional enzyme
           conserved region chr08_pseudomolecule_IMGAG_V3
           31761610-31770729 E EGN_Mt090430 20090702
          Length = 1065

 Score =  314 bits (805), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 147/210 (70%), Positives = 169/210 (80%)

Query: 1   QLQDLTRKGCPLVGIADITCDVGGSIEFINETTSIDCPFFRYEPLNDSYHHDMDGNGLIC 60
           Q+QDL R GCPLVGIADITCD+GGS+EF++ TTSID PFFRY+ + DSYH DM+GNGLIC
Sbjct: 320 QIQDLMRNGCPLVGIADITCDIGGSLEFVDRTTSIDSPFFRYDAITDSYHQDMEGNGLIC 379

Query: 61  SSVDILPTEFAKEASQHFGDILSQFIGSLVSTTDITKLPSHLRRACIAHGGAPTPMFEYI 120
            +VDILPTEFAKEASQ+FG++LSQF+ +L S TDIT LP+HLRRACI HGG  T +++YI
Sbjct: 380 LAVDILPTEFAKEASQYFGNVLSQFVTNLASATDITNLPAHLRRACIVHGGVLTSLYDYI 439

Query: 121 PRMRNSESEDMRENPVXXXXXXXXXXXXXXXXGHLFDQFLINEALDIIEAAGGSFHLVKC 180
           PRMR S+SED+ EN                  GHLFDQFLINEALDIIEAAGGSFHLV C
Sbjct: 440 PRMRKSDSEDVSENSANSLSNKSKYNTSVSLSGHLFDQFLINEALDIIEAAGGSFHLVNC 499

Query: 181 HVGQSANTPSYSELEVGADDREVLDQIIDS 210
           HVGQS +  SYSELEVGADD+ VLDQIIDS
Sbjct: 500 HVGQSFDAISYSELEVGADDKAVLDQIIDS 529


>IMGA|Medtr8g133370.2 NAD(P) transhydrogenase, alpha subunit;
           Saccharopine dehydrogenase; LOR/SDH bifunctional enzyme
           conserved region chr08_pseudomolecule_IMGAG_V3
           31761610-31767071 E EGN_Mt090430 20090702
          Length = 636

 Score =  314 bits (804), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 147/210 (70%), Positives = 169/210 (80%)

Query: 1   QLQDLTRKGCPLVGIADITCDVGGSIEFINETTSIDCPFFRYEPLNDSYHHDMDGNGLIC 60
           Q+QDL R GCPLVGIADITCD+GGS+EF++ TTSID PFFRY+ + DSYH DM+GNGLIC
Sbjct: 320 QIQDLMRNGCPLVGIADITCDIGGSLEFVDRTTSIDSPFFRYDAITDSYHQDMEGNGLIC 379

Query: 61  SSVDILPTEFAKEASQHFGDILSQFIGSLVSTTDITKLPSHLRRACIAHGGAPTPMFEYI 120
            +VDILPTEFAKEASQ+FG++LSQF+ +L S TDIT LP+HLRRACI HGG  T +++YI
Sbjct: 380 LAVDILPTEFAKEASQYFGNVLSQFVTNLASATDITNLPAHLRRACIVHGGVLTSLYDYI 439

Query: 121 PRMRNSESEDMRENPVXXXXXXXXXXXXXXXXGHLFDQFLINEALDIIEAAGGSFHLVKC 180
           PRMR S+SED+ EN                  GHLFDQFLINEALDIIEAAGGSFHLV C
Sbjct: 440 PRMRKSDSEDVSENSANSLSNKSKYNTSVSLSGHLFDQFLINEALDIIEAAGGSFHLVNC 499

Query: 181 HVGQSANTPSYSELEVGADDREVLDQIIDS 210
           HVGQS +  SYSELEVGADD+ VLDQIIDS
Sbjct: 500 HVGQSFDAISYSELEVGADDKAVLDQIIDS 529