Jatropha Genome Database

JcCA0307381.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0307381.10 - phase: 0 /partial
         (515 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g138360.1 Phospholipase D/Transphosphatidylase chr03_...   706   0.0  
IMGA|Medtr3g138370.1 Nonaspanin (TM9SF) chr03_pseudomolecule_IMG...    54   3e-07

>IMGA|Medtr3g138360.1 Phospholipase D/Transphosphatidylase
           chr03_pseudomolecule_IMGAG_V3 35369866-35366299 E
           EGN_Mt090430 20090702
          Length = 454

 Score =  706 bits (1821), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/446 (74%), Positives = 379/446 (84%)

Query: 63  LAGNSTKGLDIIAQYWQLIANSKDPRSGDYGYSKSDMEKFGAFEGFGVYKAIENAADRNV 122
           +A NST+ LD+IAQYWQL+A+S DPRSGDYGY++  M KFGA +G  VY+A++ AADRNV
Sbjct: 1   MAENSTRRLDVIAQYWQLLASSDDPRSGDYGYTQDQMHKFGAHQGAAVYQALDAAADRNV 60

Query: 123 SIRLLQHSGVYPDFTKEPNDLASGRLNVDNVTLLLGEWWGSGIVHAKVWISDSRDVYIGS 182
           +IRLL HSGVYP FT EP+ LA GR NV NVTLLL +WWGSGIVHAKVWISD+RDVYIGS
Sbjct: 61  NIRLLSHSGVYPTFTLEPSKLAYGRSNVKNVTLLLKDWWGSGIVHAKVWISDNRDVYIGS 120

Query: 183 ANNDWKSLTQVKEVGIYLVGCKKIVGKVETYFENLWKLAHLNSSAYTRSVWDQQWQINRT 242
           ANNDWKSLTQVKEVGIYL GC  I  KVE YF NLW LA LN SAYT++V DQQWQ+ R 
Sbjct: 121 ANNDWKSLTQVKEVGIYLSGCPVIAKKVEVYFNNLWTLASLNPSAYTKTVMDQQWQVERK 180

Query: 243 VPCWSHFIDSKARCRSPLPTFVEVPHVAGYPVLSDPHMIKVPIKTPGQRFSTLEPYLSYL 302
           VPCWSHFI  + RC+SPLP +VE PHV GYP+L DP+M ++ I+TPG  +ST  P +SYL
Sbjct: 181 VPCWSHFIKPRERCKSPLPRYVETPHVDGYPILYDPYMPEISIRTPGSNYSTELPQVSYL 240

Query: 303 SFAPPELSFGKYQTDEQGWIDTIKSVGSGSTVRINTMDWLGQSQFTKEKVYWSSLSSAIS 362
           SFAPPELSFG YQ+DEQ WIDTIKSVG+  TVRINTMDWLGQSQFT + ++WSSLSSAIS
Sbjct: 241 SFAPPELSFGSYQSDEQAWIDTIKSVGTKDTVRINTMDWLGQSQFTDQTIFWSSLSSAIS 300

Query: 363 EVIFSKHATVKVLVAYWAHFIDNTDQYLKSLLYSDILCNSSKYNKCHGKVEIKYYVVPGY 422
           EV+FSKHATVK+LVAYWAHFI++TD+YLK LLY++ LC+SSKYNKC GKVEIKYYVVPG+
Sbjct: 301 EVVFSKHATVKILVAYWAHFINSTDEYLKYLLYTNNLCSSSKYNKCSGKVEIKYYVVPGF 360

Query: 423 NLTGPATRNGKRTGNKYPAFTRVNHGKYAVSDVRAHIGTSNLVWDYFYTTAGVSFGTYNP 482
           N TGPA  NG  TGN YP FTRVNHGKYAVS+VRAHIGTSNLVWDYFY TAGVSFGTYN 
Sbjct: 361 NNTGPAIHNGSSTGNIYPDFTRVNHGKYAVSNVRAHIGTSNLVWDYFYVTAGVSFGTYNT 420

Query: 483 AIVLQLQKIFDADWDSPYAVPFEGLE 508
           AIV QL++IFDADW+SPYAVP +  E
Sbjct: 421 AIVSQLREIFDADWNSPYAVPIQEFE 446


>IMGA|Medtr3g138370.1 Nonaspanin (TM9SF)
          chr03_pseudomolecule_IMGAG_V3 35370099-35369868 F
          EGN_Mt090430 20090702
          Length = 55

 Score = 53.5 bits (127), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/28 (78%), Positives = 23/28 (82%)

Query: 30 SKCKAWLVQSIPTDMPQLRRVPGVLTTG 57
          S CKAWLVQSIPTDMP L   PGVL+TG
Sbjct: 24 SSCKAWLVQSIPTDMPHLSHFPGVLSTG 51