Jatropha Genome Database

JcCA0306831.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0306831.10 - phase: 0 /pseudo/partial
         (151 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g137240.1 Mg2+ transporter protein, CorA-like chr04_p...   125   7e-30
IMGA|AC233668_22.1 Mg2+ transporter protein, CorA-like AC233668....    86   6e-18
IMGA|AC233655_15.1 Mg2+ transporter protein, CorA-like AC233655....    72   1e-13
IMGA|Medtr1g117730.1 Mg2+ transporter protein, CorA-like chr01_p...    66   6e-12
IMGA|Medtr5g048220.1 Mg2+ transporter protein, CorA-like chr05_p...    57   3e-09
IMGA|Medtr5g005440.1 Mg2+ transporter protein, CorA-like chr05_p...    47   3e-06

>IMGA|Medtr4g137240.1 Mg2+ transporter protein, CorA-like
           chr04_pseudomolecule_IMGAG_V3 33771382-33768005 F
           EGN_Mt090430 20090702
          Length = 422

 Score =  125 bits (315), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 74/182 (40%), Positives = 99/182 (54%), Gaps = 31/182 (17%)

Query: 1   VRDVIEHMLDDDEDMANLYLTRKLIQVQELEAMFGGA*HSNRTTT------INA------ 48
           VRD IEH+LDD+EDMA LYLTRK +Q Q+L+A  G    +N   T      IN+      
Sbjct: 239 VRDEIEHLLDDNEDMAQLYLTRKWLQNQQLDAHLGATASNNLLNTSHSVRRINSTRSGSL 298

Query: 49  ----------------QAPHLHRLGSK---MSVREYINVAEDNVNVQLDDERNELIQLQL 89
                           +A  +   G++   +SVREYI+  ED VN+QLD+ RNELIQLQL
Sbjct: 299 VTSSDDNDVEDLEMMLEAYFMQLDGTRNKILSVREYIDDTEDYVNIQLDNHRNELIQLQL 358

Query: 90  MLKSSVVSISLQLAICGALSMNFSCVWYEMHGIFGHTVSGIVIVGFSFFMFILRYAKWKN 149
            L  +  +I+ +  + GA  MN  C  Y  +GIF   V G+  V    F+ +L YAKWK 
Sbjct: 359 TLTIASFAIAFETLVAGAFGMNIPCTLYTQNGIFWPIVGGMTAVSILLFLVVLAYAKWKK 418

Query: 150 LV 151
           L+
Sbjct: 419 LL 420


>IMGA|AC233668_22.1 Mg2+ transporter protein, CorA-like AC233668.2
           88021-91894 H EGN_Mt090430 20090702
          Length = 370

 Score = 86.3 bits (212), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 62/178 (34%), Positives = 90/178 (50%), Gaps = 30/178 (16%)

Query: 1   VRDVIEHMLDDDEDMANLYLTRKLIQVQELEAMFGGA*--HSNRTTTINAQAPHL----- 53
           VR+ IEH++DDDEDMA+LYLTRKLI +    +  G      S+ TT   + A  L     
Sbjct: 194 VREEIEHLMDDDEDMADLYLTRKLIGLSSPISKSGAENWFASSPTTKSKSVATFLSDEND 253

Query: 54  -------------------HRLGSKMSVREYINVAEDNVNVQLDDERNELIQLQLMLKSS 94
                              +RL +   +R YI+  ED +N+Q+D+ RN+LIQL++ L S+
Sbjct: 254 VDELEMLLEAYYMQIDGTFNRLST---LRGYIDDTEDYINIQIDNHRNQLIQLEIFLNSA 310

Query: 95  VVSISLQLAICGALSMNFSCVWYEMHG-IFGHTVSGIVIVGFSFFMFILRYAKWKNLV 151
            +S++    + G L MN    W   HG +F   V    I   S F+ I+  A+ K LV
Sbjct: 311 ELSLAFYSVVTGILGMNIPYGWENNHGYMFKWVVIFTGIFSISIFLTIVASARKKGLV 368


>IMGA|AC233655_15.1 Mg2+ transporter protein, CorA-like AC233655.2
           106201-110644 E EGN_Mt090430 20090702
          Length = 372

 Score = 71.6 bits (174), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 31/151 (20%)

Query: 1   VRDVIEHMLDDDEDMANLYLTRKLIQVQELEAMFGGA*HSNRTTTINAQAPHLHRLGSKM 60
           VRD IE ++DDD DMA +YLT K  +++                        L   G + 
Sbjct: 244 VRDEIEQLMDDDGDMAEMYLTEKKRRME------------------------LSFYGDQS 279

Query: 61  SVREYINVAEDNVNVQLDDERNELIQLQLMLKSSVVSISLQLAICGALSMNFSCVWYEMH 120
            ++EYI+  ED +N+QLD+ RN+LIQ +L+L ++   +++   + G   MNF    +++ 
Sbjct: 280 MLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGIFGMNFEIPLFDVP 339

Query: 121 GIFGHT-----VSGIVIVGFSFFMFILRYAK 146
             F        V G+ I  FS F++  +Y +
Sbjct: 340 SAFQWVLIITGVCGVCI--FSAFVWFFKYRR 368


>IMGA|Medtr1g117730.1 Mg2+ transporter protein, CorA-like
           chr01_pseudomolecule_IMGAG_V3 25349113-25354587 F
           EGN_Mt090430 20090702
          Length = 390

 Score = 66.2 bits (160), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 53/98 (54%), Gaps = 13/98 (13%)

Query: 61  SVREYINVAEDNVNVQLDDERNELIQLQLMLKSSVVSISLQLAICGALSMNFSCVWYEMH 120
           ++REYI+  ED +N+QLD+ RN+LIQL+L L S  V ++    + G   MN    W + H
Sbjct: 297 TLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLAFYSLVAGIFGMNIPYTWNDDH 356

Query: 121 G-------IFGHTVSGIVIVGFSFFMFILRYAKWKNLV 151
           G       IF    S I+      F+ I+ YA+ K LV
Sbjct: 357 GYMFKWVVIFSGVFSAIM------FLMIIIYARKKGLV 388


>IMGA|Medtr5g048220.1 Mg2+ transporter protein, CorA-like
           chr05_pseudomolecule_IMGAG_V3 20373106-20375614 E
           EGN_Mt090430 20090702
          Length = 405

 Score = 57.0 bits (136), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 83/201 (41%), Gaps = 55/201 (27%)

Query: 1   VRDVIEHMLDDDEDMANLYLT----------------------------------RKLIQ 26
           VRD IEH++DDD DMA + LT                                  R L  
Sbjct: 201 VRDEIEHLMDDDGDMAEMCLTEKRRRLDASPSNDCFQIRSPSGRVISKSAPTSPERSLSG 260

Query: 27  VQELEAMFGGA*HSNRTTTINAQAPHLHR------------------LGSKMSVREYINV 68
           +Q L   F G  +S++  +    + +  R                  L +  S++EYI+ 
Sbjct: 261 LQMLPRTFSGIGNSSKYGSSTGSSDNTERIQPLEMLLEAYFIVIDNTLNTLSSLKEYIDD 320

Query: 69  AEDNVNVQLDDERNELIQLQLMLKSSVVSISLQLAICGALSMNFSCVWYEMHGIFG--HT 126
            ED +N++L + +N LI+ +++L ++ +  ++  A+ G   MNF    ++    F     
Sbjct: 321 TEDFLNIKLGNIQNLLIKFEMLLTAATLVAAIFAAVAGVFGMNFETSVFDYSSGFNLVLV 380

Query: 127 VSGIVIVGFSF-FMFILRYAK 146
           V+GI  V   F  +F  RY K
Sbjct: 381 VTGIGCVALYFALLFYFRYKK 401


>IMGA|Medtr5g005440.1 Mg2+ transporter protein, CorA-like
           chr05_pseudomolecule_IMGAG_V3 172262-167373 E
           EGN_Mt090430 20090702
          Length = 444

 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 54/95 (56%), Gaps = 4/95 (4%)

Query: 61  SVREYINVAEDNVNVQLDDERNELIQLQLMLKSSVVSISLQLAICGALSMNFSCVWYE-- 118
           ++REY++  ED +N+ LDD++N L+Q+ +ML ++ + +S  + + G   MN +   ++  
Sbjct: 349 TLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGIFGMNINIELFDKN 408

Query: 119 MHGI--FGHTVSGIVIVGFSFFMFILRYAKWKNLV 151
           ++G+  F  TV G        ++  + + K K L+
Sbjct: 409 LYGMREFMWTVGGGTAGTIFLYVVAIAWCKHKRLL 443



 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/31 (70%), Positives = 27/31 (87%), Gaps = 1/31 (3%)

Query: 1   VRDVIEHMLDDDEDMANLYLTRKLIQVQELE 31
           VRD +EH+LDDDEDMA +YLT KL+Q Q+LE
Sbjct: 213 VRDELEHLLDDDEDMAEMYLTEKLLQ-QQLE 242