Jatropha Genome Database

JcCA0306451.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0306451.10 + phase: 0 /pseudo/partial
         (1182 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g038600.1 WD40-like chr02_pseudomolecule_IMGAG_V3 108...   906   0.0  
IMGA|Medtr1g106820.1 hypothetical protein chr01_pseudomolecule_I...   382   e-106

>IMGA|Medtr2g038600.1 WD40-like chr02_pseudomolecule_IMGAG_V3
            10806728-10817794 E EGN_Mt090430 20090702
          Length = 1473

 Score =  906 bits (2342), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 550/1131 (48%), Positives = 728/1131 (64%), Gaps = 50/1131 (4%)

Query: 80   FQVSXWQVFTPAFCDRDGTSIILSDDVGQLYILNTGQGESQQDAKYDQFFLGDYRPLMQD 139
            F++S +++    F   DGTSIILSDD GQLYILNTGQGESQ+DAKYDQFFLGDYRPL+QD
Sbjct: 365  FEISRFKMVDGKFSP-DGTSIILSDDAGQLYILNTGQGESQKDAKYDQFFLGDYRPLIQD 423

Query: 140  TYGNIIDQETQLVPYRRNMQDLLCDSGMNPYPEPYQSMYQKRRLGALNMEWKPPSIKLTV 199
            T+GN++DQETQ+ PYRRN+QDLLCDS M PYPEPYQS +Q+RRLGAL  +W+P  +KL +
Sbjct: 424  THGNVLDQETQITPYRRNLQDLLCDSAMIPYPEPYQSEFQRRRLGALGHDWRPSPLKLAI 483

Query: 200  VPDFSLDPDFQMLPLADLDVLVEPLPEFVDAMDWEPENEVQSEDSDSEYNVPEEYSTGGE 259
              DFSLDP + MLPLADLD L EPLPEF+DAMDWEP+ EV  +D+DSEYN+ ++ S+ GE
Sbjct: 484  GTDFSLDPAYHMLPLADLDQLAEPLPEFIDAMDWEPDIEVLVDDTDSEYNLTDDSSSRGE 543

Query: 260  QGSLNSSSSVDRECSAEDSEVEG--RNGFHRSKRKKSKAEIEIMTSSGRRVKRRNLDECD 317
            +G  +S++S D  CS ++S+ E    +   RSKRKK K  IE MTSSGRRVKRRNLDEC+
Sbjct: 544  KGCSSSNASGDPGCSTDNSDDEDTHMDCIRRSKRKKQKTGIETMTSSGRRVKRRNLDECE 603

Query: 318  GNTLRTNRTRKSRIGCKASKRKSSTSKGFRPQRAAARNALTLFSKITGAATDGXXXXXXX 377
            GN   ++R+RK + G K+S+RKSS SK  RP+RAAARNAL LFSKITG   +G       
Sbjct: 604  GNVHSSSRSRKGKSGKKSSRRKSSKSKSSRPRRAAARNALHLFSKITGTPNEGEEDSLVG 663

Query: 378  XXXXXXXXXLQNSDIQSDESEKSLQNERNKHLKGKEVPLEDNEDFVKSHEQSHLNAGNRG 437
                     LQ S+I SDES ++ +N++  + KGKEV L ++ED  KSHE +     NR 
Sbjct: 664  DSSDSDST-LQESNIDSDESGRASENDQRNYSKGKEVLLYESED-SKSHEFTETRV-NRR 720

Query: 438  KLVLKLPVRNSNKFVVSETKTTNHQIDVGPSSCKAPTEASNVNRVHIRSVDLERSSSYTN 497
            +LVLKLP+R+S+K          +Q ++  SS K   E  + NR   R    E      N
Sbjct: 721  RLVLKLPIRDSSK----PAHEFENQAELVGSSSKTAQEFPDFNRK--RPSSSEPGYCLGN 774

Query: 498  GT--AVKAKERGQTDSYMSEGYRNEDIKWGGVKARTSKRQRFGEAMSSAAYARFGLCFSD 555
            G+  +++  ++ + D         E ++WG V+AR++K  R  E +   A      C + 
Sbjct: 775  GSYSSIERTDQVKLDQVTDHVDLLEKLRWGVVRARSAKPLRMREDVPLGANPNSVECRNH 834

Query: 556  RRERESNLNGHVKS-QNTCGTSSSA-EVQDY-AADNTNEVGATGREDTAADTSDVVNTMT 612
              E E    GH +  ++  GTS+ A E+Q+    D+  E+     E+ A  TS   N   
Sbjct: 835  LNEEEIVSVGHDREDKDFSGTSTPALEIQNGDKVDSLTEIN----ENCAGTTSQPFNLTE 890

Query: 613  NGKEHLNFNECMDSDELPMVG--------HTANGNDSSLEFKESNI---PISTKLRIKSR 661
            NG+     +   D DE  +              G   + +  E NI    +STKLR K  
Sbjct: 891  NGEPLTASSNYRDQDESLVSASMIPENNIFVPVGQSGADQLPEPNIGFPSVSTKLRSKRG 950

Query: 662  MISRESS---ENQGNEGSCILPASLAENTDTPVLEVPKNERTNRTTPVNEGDEFQEPNAQ 718
              + ES    E + +  +    +S A         V   +  N T   +   E   P   
Sbjct: 951  TRNPESPCKPETKSSVLNNNASSSNANINVNNEEHVVVVKDDNNTGVTSNQRENCSPEVD 1010

Query: 719  VDKISMPLLNDTIGSNTHPKKMFNVVYRRSKLSKDRANSEGDSGTREGVSHAS------- 771
            V    +   +D++  +++  KMF  VYRRS+  +   N    SG  E  S+ S       
Sbjct: 1011 VQAKQVSTSHDSLEPHSNRDKMFKAVYRRSRSHRAVTNLADGSGLGESTSNGSNSNFNVA 1070

Query: 772  ADEQYTGCILHEDITDGPHRTDITGSKATTDDLMNCNIKLGQEHDSDDVCRNADNGSISS 831
             D   T   LH   T+G    +  GS    ++  N  ++ G   +   + R   N S  +
Sbjct: 1071 VDSNGTNEALH---TNGSLELE-QGSCVPNNEQSNLKVQQG---NGSCMVRIPQNVS-PN 1122

Query: 832  RCQLPSEEWGSSSRMTVGLRSSRNRRTSYHFRDASPVDRRKANQSGKKVSWLMLSKHEEG 891
            + +L  EE GSSS++TVGLRS+RNRR++Y+ R+ SPV+RRK+ QS  K SWL+LS HEEG
Sbjct: 1123 KGKLTEEERGSSSKLTVGLRSTRNRRSTYNIRETSPVNRRKSLQSAVKGSWLLLSTHEEG 1182

Query: 892  SRYIPQQGDEVVYFRQGHQEYIDYIGSRETGPWKSVKGHIRAVEFCKLEALEYSTLPGSG 951
             RYIPQQGDEVVY RQGHQEYI+Y   RE+GPW S+K H+RAVE+C++++LEYS +PGSG
Sbjct: 1183 CRYIPQQGDEVVYLRQGHQEYIEYSRKRESGPWVSLKEHLRAVEYCRVQSLEYSHVPGSG 1242

Query: 952  DSCCKMTLKFVDSTSDVCQKSFKLTLPEVTGFPDFLVERTRFDAAMRRNWTCRDKCRVYW 1011
            DSCCKMTL+F+D  S V  K+FKLTLPEVTGFPDFLVERTRFDAA++RNWT RDKCRV+W
Sbjct: 1243 DSCCKMTLEFLDPNSSVVGKTFKLTLPEVTGFPDFLVERTRFDAAIQRNWTRRDKCRVWW 1302

Query: 1012 KNDGEGDGSWWEGRILSVKAKTSEFPDSPWERYTIQYRSDPRETHQHSPWELFDFDSQWE 1071
            KN+    G+WWEGRI  VKAK+SEFPDSPWERY+++Y+SD  + H HSPWELFD D+QWE
Sbjct: 1303 KNEDNSSGNWWEGRIQFVKAKSSEFPDSPWERYSVRYKSDLSDEHLHSPWELFDADTQWE 1362

Query: 1072 QPHIDDEIRNKLISAFAKLEQSGNTEQDRYGIQKLRQVSQKTNFTNRYPVPLSLEVIQSR 1131
            QPHIDD  RNKL+SA  K++QSGNT QDRYG+ +L ++S K+ FTNR+PVPLS+E+IQSR
Sbjct: 1363 QPHIDDHTRNKLLSALTKVQQSGNTVQDRYGLHELEKISNKSKFTNRFPVPLSIELIQSR 1422

Query: 1132 LENYYYRTLEAVKHDIEVMLTNSESYFIKNLELSGKMKRLSGWFKKTLSSL 1182
            LEN YYR+L+A+KHD+ ++LTN+ S+F K+L ++ K+K LS WF +TLSSL
Sbjct: 1423 LENSYYRSLDALKHDVSILLTNANSFFEKDLVMTTKIKHLSEWFTRTLSSL 1473


>IMGA|Medtr1g106820.1 hypothetical protein
            chr01_pseudomolecule_IMGAG_V3 22386488-22399727 E
            EGN_Mt090430 20090702
          Length = 1355

 Score =  382 bits (980), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 186/337 (55%), Positives = 244/337 (72%), Gaps = 12/337 (3%)

Query: 851  RSSRNRRTSYHFRDASPVDRRKANQSGKKVSWLMLSK-HEEGSRYIPQQGDEVVYFRQGH 909
            RS+RNR   Y   D   + RR  N   KK+SWLMLS+ HEEG RYIPQ GDEVVY RQGH
Sbjct: 1026 RSARNRSDEYIANDPGTLIRRMPNHHVKKLSWLMLSEEHEEGYRYIPQLGDEVVYLRQGH 1085

Query: 910  QEYIDYIGSRETGPWKSVKGHIRAVEFCKLEALEYSTLPGSGDSCCKMTLKFVDSTSDVC 969
            +EY++     E GPW S +G +RAVE CK+E LEY+ LPGSGDSCCK+ LKFVD +S   
Sbjct: 1086 EEYVESCTMSEQGPWISFQG-LRAVEICKVEKLEYAELPGSGDSCCKLWLKFVDPSSRAF 1144

Query: 970  QKSFKLTLPEVTGFPDFLVERTRFDAAMRRNWTCRDKCRVYWKN-DGEGDGSWWEGRILS 1028
            +KSFKL LPE+  F DF++E+T +DAAM+RNW+  ++CRV+W+N DG+G GSWW G+I++
Sbjct: 1145 RKSFKLILPELINFCDFVIEKTFYDAAMKRNWSPEERCRVWWRNEDGKG-GSWWYGQIVA 1203

Query: 1029 VKAKTSEFPDSPWERYTIQYRS-DPRETHQHSPWELFDFDSQWEQPHIDDEIRNKLISAF 1087
            +KAK+ EFPDSPW+R+ I+Y + DP E H HSPWEL D + QWE PHID EIR+KL+S F
Sbjct: 1204 LKAKSDEFPDSPWDRFKIEYDTDDPTEDHFHSPWELNDPEVQWEHPHIDHEIRDKLLSYF 1263

Query: 1088 AKLEQSGNTEQDRYGIQKLRQVSQKTNFTNRYPVPLSLEVIQSRLENYYYRTLEAVKHDI 1147
             KL       +++Y  Q L QV+++T+F NR+PVP    +IQ RL+N YYR +E VKHDI
Sbjct: 1264 TKL-----YHREKYDFQALNQVAERTDFCNRFPVPFYPGLIQLRLQNDYYRNVEGVKHDI 1318

Query: 1148 EVMLTNSESYF--IKNLELSGKMKRLSGWFKKTLSSL 1182
             VML+N+E +F  IKN +L  K++R+S W  + L  +
Sbjct: 1319 MVMLSNAEEFFRVIKNGKLQRKVERISEWLGRKLERI 1355



 Score =  308 bits (790), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 182/365 (49%), Positives = 244/365 (66%), Gaps = 13/365 (3%)

Query: 96  DGTSIILSDDVGQLYILNTGQGESQQDAKYDQFFLGDYRPLMQDTYGNIIDQETQLVPYR 155
           DGTSI+LSDDVGQ+Y L+TGQGESQ+DAKYDQFFLGDYRPL++D  GN++DQETQL P R
Sbjct: 298 DGTSIVLSDDVGQIYFLSTGQGESQKDAKYDQFFLGDYRPLIRDAQGNVLDQETQLPPNR 357

Query: 156 RNMQDLLCDSGMNPYPEPYQSMYQKRRLGALNMEWKPPSIKLTVVPDFSLDPDFQMLPLA 215
           R++Q+ LCDS M PYPEPYQS +Q+RRLGAL +EW P  IK TV P FS+D DFQ +PL 
Sbjct: 358 RHVQEPLCDSTMLPYPEPYQSQFQQRRLGALGIEWNPSLIKYTVGPVFSVDQDFQEIPLV 417

Query: 216 DLDVLVEPLPEFVDA-MDWEPENEVQSEDSDSEYNVPEEYSTGGEQGSLNSSSSVDRECS 274
           DL+ +++P PEF+DA + WEPE++  S+D+DSEYNV E+ S+  EQG++++ SS D E S
Sbjct: 418 DLEGMLDPQPEFLDASIFWEPEHDNVSDDNDSEYNVNEDNSSAAEQGAVSAISSSDLEYS 477

Query: 275 AEDSEVEGRNGFHRSKRKKSKAEIEIMTSSGRRVKRRNLDECDGNTLRTNRTRKSRIGCK 334
             DS    R+GF RS+R      +E M SSGRRV++RN +EC+GNT   NR +KS+   K
Sbjct: 478 EGDS--NNRDGFRRSRRTNHGVGVEGMISSGRRVRKRNFEECNGNTSGNNRIKKSKGSSK 535

Query: 335 ASKRKSSTSKGFRPQRAAARNALTLFSKITGAATDGXXXXXXXXXXXXXXXXLQNSDIQS 394
           + K+KSS +K  RPQR AA NA  +F +I G  +                   +N     
Sbjct: 536 SRKKKSSKAKTSRPQRTAAHNARNMFVQI-GETSTDGEDDDSDDESSDSFQDSEN----F 590

Query: 395 DESEKSLQNERNKHLKGKEVPLEDNEDFVKS--HEQSHLNAGNRGKLVLKLPVRNSNKFV 452
            E E+ +    NKH + K+  LE++ D   +  + +S  N  +R +LVLKL +R+S K V
Sbjct: 591 SEPERKIH---NKHEELKKPLLEESADISNTPPYSESQANLESRPRLVLKLSLRDSKKNV 647

Query: 453 VSETK 457
             E +
Sbjct: 648 PLEDR 652