Jatropha Genome Database

JcCA0305581.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0305581.10 - phase: 0 
         (585 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g094490.1 2Fe-2S ferredoxin, iron-sulfur binding site...   863   0.0  
IMGA|Medtr5g094520.1 2Fe-2S ferredoxin, iron-sulfur binding site...   753   0.0  
IMGA|Medtr2g117560.1 2Fe-2S ferredoxin, iron-sulfur binding site...   295   5e-80
IMGA|Medtr5g094500.1 Aldehyde oxidase 2, putative chr05_pseudomo...   102   5e-22

>IMGA|Medtr5g094490.1 2Fe-2S ferredoxin, iron-sulfur binding site;
            Xanthine dehydrogenase, small subunit; Carbon-monoxide
            dehydrogenase, large subunit
            chr05_pseudomolecule_IMGAG_V3 37388580-37380627 H
            EGN_Mt090430 20090702
          Length = 1356

 Score =  863 bits (2229), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/583 (70%), Positives = 484/583 (83%), Gaps = 15/583 (2%)

Query: 1    MENQTALAIPDEDKCIMVYSSIQCPEYGHAVIARCLGVPEHNVRVIARRVGGGFGGKAIK 60
            +E QTALA+PDED CI VYSS QCPE+ H+ IARCLG+PE NVRVI RRVGGGFGGKAIK
Sbjct: 787  LETQTALAVPDEDNCITVYSSSQCPEFTHSTIARCLGIPESNVRVITRRVGGGFGGKAIK 846

Query: 61   AMPVATACALAAFKLQRPVRMYLSRKTDMIMAGGRHPMKITYNVGFKSNGKITALQLDIL 120
            ++  ATACALAA KL RPVRMYL+RKTDMIMAGGRHPMKITY+VGFK++GKITAL+L+IL
Sbjct: 847  SISTATACALAAQKLCRPVRMYLNRKTDMIMAGGRHPMKITYSVGFKNDGKITALELEIL 906

Query: 121  VDAGIAPDISPVVPHNIMGALKKYDWGALSFDIKVCKTNLPSRSAMRGPGEVQGSYIAEA 180
            ++AGI  DIS  +P +I+G LKKYDWGALSFDIKVC+TNLPSRSAMRGPGE+QGS+IAE 
Sbjct: 907  INAGIYVDISAALPLSIVGGLKKYDWGALSFDIKVCRTNLPSRSAMRGPGELQGSFIAEG 966

Query: 181  VIEHVASSLSMDADSVRAINLHAYDSLKLFYDIGAGEPLEYTLISIWDKVATTSSFFQRT 240
            ++E+VA++LSMD DSVR+INLH + SL+ FY+  +GEP EYTL SIW K+A  +++ QR 
Sbjct: 967  IVENVAATLSMDVDSVRSINLHTHTSLQSFYEHSSGEPFEYTLPSIWSKLAVAANYEQRI 1026

Query: 241  EMVKEFNSCNLWRKRGVSRIPIVHEVMLRPTPGKVSILSDGSVAVEVGGIELGQGLWTKV 300
            +MVKEFN  + W+K+G+SRIP+V ++ LRPTPGKVSILSDGSV VEVGGIE+GQGLWTKV
Sbjct: 1027 KMVKEFNRISTWKKKGISRIPVVIQLTLRPTPGKVSILSDGSVVVEVGGIEIGQGLWTKV 1086

Query: 301  KQMVAFALGSIKCAGAGDLFDKVRVVQSDTLSLIQXXXXXXXXXXXXXCEAVRMCCKVLV 360
            KQM AFA                RVVQ+DT+SLIQ             CEAVR+ C +LV
Sbjct: 1087 KQMAAFA---------------PRVVQADTVSLIQGGFTAGSTTSEASCEAVRLSCNILV 1131

Query: 361  DRLTPLKDRLQVQMGSIRWETLIRQAYQEAVHLSASSFFVPDSTSMKYLNYGAAVSEVEV 420
            +RL PLK++LQ +MGSI+WETLI QAY ++V+LSASSF+VP + SM Y+NYGAAVSEVE+
Sbjct: 1132 ERLKPLKEKLQEEMGSIKWETLILQAYMQSVNLSASSFYVPSNNSMMYVNYGAAVSEVEI 1191

Query: 421  DLLTGHTTILRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYTTNSDGLVIEEGT 480
            DLLTG T  L++DIIYDCGQSLNPAVDLGQIEGAFVQG+GFFMLEEY T+ +GL + +GT
Sbjct: 1192 DLLTGETKFLQTDIIYDCGQSLNPAVDLGQIEGAFVQGLGFFMLEEYETDINGLSLADGT 1251

Query: 481  WTYKIPTIDTIARQFNVEILNSGHHQKRVLSSKASGEPPLLLAASVHCATRAAIKDARKQ 540
            W YKIPTIDTI +QFNVEI NSGH+Q RVLSSKASGEPPLLLAASVHCATRAAIK+ARKQ
Sbjct: 1252 WNYKIPTIDTIPQQFNVEIFNSGHNQHRVLSSKASGEPPLLLAASVHCATRAAIKEARKQ 1311

Query: 541  LQLWGCQDGLRSTFDLEVPATMPIVKELCGLDSVEKYLKWKIS 583
            L  W   D   STF+L VPATMP+VKEL GLD VE+YLKWK+S
Sbjct: 1312 LLSWRNLDEPDSTFELRVPATMPVVKELIGLDVVERYLKWKMS 1354


>IMGA|Medtr5g094520.1 2Fe-2S ferredoxin, iron-sulfur binding site;
            Xanthine dehydrogenase, small subunit; Carbon-monoxide
            dehydrogenase, large subunit
            chr05_pseudomolecule_IMGAG_V3 37404021-37397275 E
            EGN_Mt090430 20090702
          Length = 1320

 Score =  753 bits (1945), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/515 (69%), Positives = 426/515 (82%)

Query: 1    MENQTALAIPDEDKCIMVYSSIQCPEYGHAVIARCLGVPEHNVRVIARRVGGGFGGKAIK 60
            ME  TALA+PDED CI VY S Q PE+ H+ IARCLG+PE+NVRVI RRVGGGFGGK +K
Sbjct: 787  METHTALAVPDEDNCITVYLSSQSPEFAHSTIARCLGIPENNVRVITRRVGGGFGGKGMK 846

Query: 61   AMPVATACALAAFKLQRPVRMYLSRKTDMIMAGGRHPMKITYNVGFKSNGKITALQLDIL 120
            A+  A +CALAA KLQR VRMYL+RKTDMIMAGGRHPMKITY+VGFK+NGKITAL L+IL
Sbjct: 847  AIAGAVSCALAAQKLQRAVRMYLNRKTDMIMAGGRHPMKITYSVGFKNNGKITALDLEIL 906

Query: 121  VDAGIAPDISPVVPHNIMGALKKYDWGALSFDIKVCKTNLPSRSAMRGPGEVQGSYIAEA 180
            V+AGI PD+S ++P  I GALKKYDWGALS DIK+C+TN PSRSA+RGPG+ QGS+IAE 
Sbjct: 907  VNAGIYPDVSAIMPRKIAGALKKYDWGALSLDIKLCRTNHPSRSALRGPGDTQGSFIAEG 966

Query: 181  VIEHVASSLSMDADSVRAINLHAYDSLKLFYDIGAGEPLEYTLISIWDKVATTSSFFQRT 240
            +IE+VA++LSM+ DSVR+INLH Y SLK FYD   GEPLEYT+  IW+K+A ++++  R 
Sbjct: 967  IIENVAATLSMEVDSVRSINLHTYTSLKKFYDDSCGEPLEYTMPLIWNKLAVSANYEPRV 1026

Query: 241  EMVKEFNSCNLWRKRGVSRIPIVHEVMLRPTPGKVSILSDGSVAVEVGGIELGQGLWTKV 300
            + VKEFN  N+W+K+G+SRIP++ E+ LRPTPGKVSILSDGSV VEVGGIE+GQGLWTKV
Sbjct: 1027 DKVKEFNRLNIWKKKGISRIPVLFELSLRPTPGKVSILSDGSVVVEVGGIEMGQGLWTKV 1086

Query: 301  KQMVAFALGSIKCAGAGDLFDKVRVVQSDTLSLIQXXXXXXXXXXXXXCEAVRMCCKVLV 360
            KQM AFALG+I+C G   L DKVRVVQSDTLS+IQ             C AVR+ C  LV
Sbjct: 1087 KQMAAFALGTIQCNGTESLLDKVRVVQSDTLSMIQGGLTAGSTTSEASCAAVRLSCNTLV 1146

Query: 361  DRLTPLKDRLQVQMGSIRWETLIRQAYQEAVHLSASSFFVPDSTSMKYLNYGAAVSEVEV 420
            +RL P+K +LQ +  SI+WE LI QAY +AV+LS SS+FVP S S+KY+NYGAAVSEVE+
Sbjct: 1147 ERLQPIKKQLQEKKSSIKWEDLILQAYMQAVNLSDSSYFVPGSNSVKYINYGAAVSEVEI 1206

Query: 421  DLLTGHTTILRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYTTNSDGLVIEEGT 480
            DLLTG T  L++DIIYDCGQSLNPAVDLGQIEGAF+QG+GFFMLEEY TN DGLV+++GT
Sbjct: 1207 DLLTGETRFLQTDIIYDCGQSLNPAVDLGQIEGAFIQGLGFFMLEEYETNLDGLVLQDGT 1266

Query: 481  WTYKIPTIDTIARQFNVEILNSGHHQKRVLSSKAS 515
            W YKIPTIDTI  QFNVEILNS HHQ+RVLSSK S
Sbjct: 1267 WNYKIPTIDTIPHQFNVEILNSEHHQRRVLSSKGS 1301


>IMGA|Medtr2g117560.1 2Fe-2S ferredoxin, iron-sulfur binding site;
            Xanthine dehydrogenase, small subunit; Carbon-monoxide
            dehydrogenase, large subunit
            chr02_pseudomolecule_IMGAG_V3 27646570-27659065 E
            EGN_Mt090430 20090702
          Length = 1358

 Score =  295 bits (754), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 193/578 (33%), Positives = 291/578 (50%), Gaps = 48/578 (8%)

Query: 16   IMVYSSIQCPEYGHAVIARCLGVPEHNVRVIARRVGGGFGGKAIKAMPVATACALAAFKL 75
            + + SS Q P+     I+  LG+P   V    +R+GGGFGGK  ++  +A A ++ ++ L
Sbjct: 786  VHMISSTQAPQKHQKYISHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAVSVPSYLL 845

Query: 76   QRPVRMYLSRKTDMIMAGGRHPMKITYNVGFKSNGKITALQLDILVDAGIAPDIS-PVVP 134
             RPV++ L R  DM++ G RH     Y VGF + GK+ AL L+I  +AG + D+S  ++ 
Sbjct: 846  NRPVKIILDRDVDMMITGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAILE 905

Query: 135  HNIMGALKKYDWGALSFDIKVCKTNLPSRSAMRGPGEVQGSYIAEAVIEHVASSLSMDAD 194
              +  +   Y+   +    +VC TN PS +A RG G  QG  I E  I+ +A  L M  +
Sbjct: 906  RAMFHSDNVYEIPNVRITGRVCFTNFPSNTAFRGFGGPQGMLITENWIQRIAVELDMSPE 965

Query: 195  SVRAINLHAYDSLKLFYDIGAGEPLEYTLIS-IWDKVATTSSFFQRTEMVKEFNSCNLWR 253
             ++ IN     S+ L Y    G+ LE+  +S +W+++  +  F +  E V +FN+ N WR
Sbjct: 966  VIKEINFQGEGSI-LHY----GQILEHCPLSQLWNELKLSCDFVKTREEVDKFNAHNRWR 1020

Query: 254  KRGVSRIPIVHEV-----MLRPTPGKVSILSDGSVAVEVGGIELGQGLWTKVKQMVAFAL 308
            KRG++ IP    +      +      V++ +DG+V V  GG+E+GQGL TKV Q+ A A 
Sbjct: 1021 KRGIAMIPTKFGISFTTKFMNQAGALVNVYTDGTVLVTHGGVEMGQGLHTKVAQIAASAF 1080

Query: 309  GSIKCAGAGDLFDKVRVVQSDTLSLIQXXXXXXXXXXXXXCEAVRMCCKVLVDRLTPLKD 368
                          V + ++ T  +                 AV   C+ +  R+ P+  
Sbjct: 1081 NIP--------LSSVFISETSTDKVPNSSPTAASASSDMYGGAVLDACEQIKARMEPIAS 1132

Query: 369  RLQVQMGSIRWETLIRQAYQEAVHLSASSFFV-PD---------STSMKYLNYGAAVSEV 418
            R         +  L+   Y E + LSA  F++ PD              Y  YGAA +EV
Sbjct: 1133 RHNFA----SFAELVNACYMERIDLSAHGFYITPDINFDWITGKGNPFSYFTYGAAFAEV 1188

Query: 419  EVDLLTGHTTILRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYTTNS------- 471
            E+D LTG      ++II D G SLNPA+D+GQIEGAF+QG+G+  LEE            
Sbjct: 1189 EIDTLTGDFHTRAANIILDLGYSLNPAIDVGQIEGAFIQGLGWVALEELKWGDKAHKWIP 1248

Query: 472  DGLVIEEGTWTYKIPTIDTIARQFNVEILNSGHHQKRVLSSKASGEPPLLLAASVHCATR 531
             G +   G   YKIP+I+ +  +FNV +L    + K + SSKA GEPP  LA++V  A +
Sbjct: 1249 SGWLNTCGPGAYKIPSINDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASAVFFAIK 1308

Query: 532  AAIKDARKQLQLWGCQDGLRSTFDLEVPATMPIVKELC 569
             AI+ AR +    GC D     F L+ PAT   ++  C
Sbjct: 1309 DAIRAARAET---GCTD----WFTLDSPATPERIRMAC 1339


>IMGA|Medtr5g094500.1 Aldehyde oxidase 2, putative
           chr05_pseudomolecule_IMGAG_V3 37396446-37396068 E
           EGN_Mt090430 20090702
          Length = 81

 Score =  102 bits (254), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 50/73 (68%), Positives = 59/73 (80%), Gaps = 1/73 (1%)

Query: 514 ASGEPPLLLAASVHCATRAAIKDARKQLQLW-GCQDGLRSTFDLEVPATMPIVKELCGLD 572
           ASGEPPLLLAASVHCATR+A+K+ARKQL  W    DG  S F L VPATMP+VKE+ GLD
Sbjct: 9   ASGEPPLLLAASVHCATRSAVKEARKQLLSWSNSDDGSDSAFQLGVPATMPVVKEVIGLD 68

Query: 573 SVEKYLKWKISSK 585
            V++YLKWK+ +K
Sbjct: 69  IVQRYLKWKMDNK 81