Jatropha Genome Database

JcCA0305301.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0305301.10 + phase: 0 
         (282 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g121440.1 Di-trans-poly-cis-decaprenylcistransferase ...   237   4e-63
IMGA|Medtr1g121110.1 Di-trans-poly-cis-decaprenylcistransferase ...   237   5e-63
IMGA|Medtr8g087990.1 Di-trans-poly-cis-decaprenylcistransferase ...   234   4e-62
IMGA|Medtr5g078680.1 Di-trans-poly-cis-decaprenylcistransferase ...   117   6e-27
IMGA|Medtr5g078710.1 Di-trans-poly-cis-decaprenylcistransferase ...    63   1e-10
IMGA|Medtr5g078690.1 Di-trans-poly-cis-decaprenylcistransferase ...    60   1e-09
IMGA|Medtr5g078720.1 Di-trans-poly-cis-decaprenylcistransferase ...    56   2e-08

>IMGA|Medtr1g121440.1 Di-trans-poly-cis-decaprenylcistransferase
           chr01_pseudomolecule_IMGAG_V3 26461750-26464002 E
           EGN_Mt090430 20090702
          Length = 360

 Score =  237 bits (605), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 107/178 (60%), Positives = 145/178 (81%), Gaps = 1/178 (0%)

Query: 8   LGFLASSLRNCLFSVLSVGPIPCHLAFIMDGNRRFAKKQKQGVVTGYRAGFTALMSIIKY 67
           LG L   LR C+F+VLS GP+P H+AFIMDGNRR+A+++  G   G++AGF+AL+S+++Y
Sbjct: 13  LGGLYCCLRRCIFAVLSAGPLPNHIAFIMDGNRRYARRRNMGEGDGHKAGFSALLSVLRY 72

Query: 68  CSELGVKYVTIYAFSIDNFRREPEEVKIIMDLMLEKTEGILKEESVVHQYGVRVYFLGNL 127
           C ELG+KYVT+YAFSIDNFRR+P+EV+  M+LM EK E +L++ES++++YGVR++F+GN+
Sbjct: 73  CYELGIKYVTVYAFSIDNFRRKPKEVQTFMELMREKIEELLQQESIINEYGVRLHFIGNM 132

Query: 128 KLLCEPLRVAAEKVMKATASNTKLLLFICVAYTSLDEIIHAVHESCNDKLKNIILPDK 185
           +LL EP+RVAAEK M+ TA N + +L ICVAYTS DEI+HAV ESC DK  N I P K
Sbjct: 133 QLLTEPVRVAAEKAMRVTAHNQERVLLICVAYTSRDEIVHAVQESCKDKW-NEIQPSK 189



 Score =  142 bits (357), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 64/78 (82%), Positives = 71/78 (91%)

Query: 204 IKLVDIEKHMYMALGPEPDVLIRTSGESRLSNFLLWQTSHCTLYSPDALWPEIGLWNLVW 263
           IKLVDIEKHMYMA+ P+PD+LIRTSGE+RLSNFLLWQTS C LY+P  LWPEIGL +LVW
Sbjct: 282 IKLVDIEKHMYMAVAPDPDILIRTSGEARLSNFLLWQTSACPLYAPKVLWPEIGLRHLVW 341

Query: 264 AVLNFQRNHSYLEKKKKQ 281
           AVLNFQR+H YLEKKKKQ
Sbjct: 342 AVLNFQRHHFYLEKKKKQ 359


>IMGA|Medtr1g121110.1 Di-trans-poly-cis-decaprenylcistransferase
           chr01_pseudomolecule_IMGAG_V3 26316000-26314195 E
           EGN_Mt090430 20090702
          Length = 251

 Score =  237 bits (605), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 107/178 (60%), Positives = 145/178 (81%), Gaps = 1/178 (0%)

Query: 8   LGFLASSLRNCLFSVLSVGPIPCHLAFIMDGNRRFAKKQKQGVVTGYRAGFTALMSIIKY 67
           LG L   LR C+F+VLS GP+P H+AFIMDGNRR+A+++  G   G++AGF+AL+S+++Y
Sbjct: 45  LGGLYCCLRRCIFAVLSAGPLPNHIAFIMDGNRRYARRRNMGEGDGHKAGFSALLSVLRY 104

Query: 68  CSELGVKYVTIYAFSIDNFRREPEEVKIIMDLMLEKTEGILKEESVVHQYGVRVYFLGNL 127
           C ELG+KYVT+YAFSIDNFRR+P+EV+  M+LM EK E +L++ES++++YGVR++F+GN+
Sbjct: 105 CYELGIKYVTVYAFSIDNFRRKPKEVQTFMELMREKIEELLQQESIINEYGVRLHFIGNM 164

Query: 128 KLLCEPLRVAAEKVMKATASNTKLLLFICVAYTSLDEIIHAVHESCNDKLKNIILPDK 185
           +LL EP+RVAAEK M+ TA N + +L ICVAYTS DEI+HAV ESC DK  N I P K
Sbjct: 165 QLLTEPVRVAAEKAMRVTAHNQERVLLICVAYTSRDEIVHAVQESCKDKW-NEIQPSK 221


>IMGA|Medtr8g087990.1 Di-trans-poly-cis-decaprenylcistransferase
           chr08_pseudomolecule_IMGAG_V3 18527683-18528833 E
           EGN_Mt090430 20090702
          Length = 360

 Score =  234 bits (597), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 105/178 (58%), Positives = 145/178 (81%), Gaps = 1/178 (0%)

Query: 8   LGFLASSLRNCLFSVLSVGPIPCHLAFIMDGNRRFAKKQKQGVVTGYRAGFTALMSIIKY 67
           LG L   LR C+F+VLS GP+P H+AFIMDGNRR+A+++  G   G++AGF+AL+S+++Y
Sbjct: 13  LGGLYCCLRRCIFAVLSAGPLPNHIAFIMDGNRRYARRRNLGEGDGHKAGFSALLSVLRY 72

Query: 68  CSELGVKYVTIYAFSIDNFRREPEEVKIIMDLMLEKTEGILKEESVVHQYGVRVYFLGNL 127
           C ELG+KYVT+YAFSIDNFRR+P+EV+  M+LM EK E +L++ES++++YGVR++F+GN+
Sbjct: 73  CYELGIKYVTVYAFSIDNFRRKPKEVQTFMELMREKIEELLQQESIINEYGVRLHFIGNM 132

Query: 128 KLLCEPLRVAAEKVMKATASNTKLLLFICVAYTSLDEIIHAVHESCNDKLKNIILPDK 185
           +LL EP+R+AAE+ M+ TA N + +L ICVAYTS DEI+HAV ESC DK  N I P K
Sbjct: 133 QLLTEPVRIAAERAMRVTAHNQERVLLICVAYTSRDEIVHAVQESCKDKW-NEIQPSK 189



 Score =  140 bits (352), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 63/78 (80%), Positives = 70/78 (89%)

Query: 204 IKLVDIEKHMYMALGPEPDVLIRTSGESRLSNFLLWQTSHCTLYSPDALWPEIGLWNLVW 263
           IKLVDIEKHMYM + P+PD+LIRTSGE+RLSNFLLWQTS C LY+P  LWPEIGL +LVW
Sbjct: 282 IKLVDIEKHMYMTVAPDPDILIRTSGEARLSNFLLWQTSACPLYAPKVLWPEIGLRHLVW 341

Query: 264 AVLNFQRNHSYLEKKKKQ 281
           AVLNFQR+H YLEKKKKQ
Sbjct: 342 AVLNFQRHHFYLEKKKKQ 359


>IMGA|Medtr5g078680.1 Di-trans-poly-cis-decaprenylcistransferase
           chr05_pseudomolecule_IMGAG_V3 29148457-29146350 E
           EGN_Mt090430 20090702
          Length = 310

 Score =  117 bits (293), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 128/248 (51%), Gaps = 20/248 (8%)

Query: 28  IPCHLAFIMDGNRRFAKKQKQGVVTGYRAGFTALMSIIKYCSELGVKYVTIYAFSIDNFR 87
           +P H+A IMDGN R+AK +      G+ AG  +L  ++  C   G+K +T++AFS DN+ 
Sbjct: 78  MPKHVAVIMDGNGRWAKMRGLPASAGHVAGIKSLRRMVMLCYSWGIKVLTVFAFSTDNWI 137

Query: 88  REPEEVKIIMDLMLEKTEGILKEESVVHQYGVRVYFLGNLKLLCEPLRVAAEKVMKATAS 147
           R   EV+ +M L  E+T  I  E   + + G+++  +G+   L + L+       ++T  
Sbjct: 138 RPKVEVEFLMSL-FERT--INSEIEALEREGIQISVIGDTSKLPKSLKSMIASAEESTKE 194

Query: 148 NTKLLLFICVAYTSLDEIIHAVHESCNDKLKNIILPDKPHTDXXXXXXXXXXXKDGIKLV 207
           N K  L + V+Y+   +++ A  +S   K+++ I+    H +                ++
Sbjct: 195 NPKFQLILAVSYSGKYDLVQAC-KSVAQKVQDGII----HLEDINE-----------NII 238

Query: 208 DIEKHMYMALGPEPDVLIRTSGESRLSNFLLWQTSHCTLYSPDALWPEIGLWNLVWAVLN 267
           + E        P PD+LIRTSGE R+SNFLLWQ ++  L+    LWP+ G    + A+ +
Sbjct: 239 EKELETNCTEFPYPDLLIRTSGELRVSNFLLWQLAYTELFFNRKLWPDFGKDEFIEALTS 298

Query: 268 FQ-RNHSY 274
           FQ R   Y
Sbjct: 299 FQNRQRRY 306


>IMGA|Medtr5g078710.1 Di-trans-poly-cis-decaprenylcistransferase
           chr05_pseudomolecule_IMGAG_V3 29154047-29152742 E
           EGN_Mt090430 20090702
          Length = 215

 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 4/105 (3%)

Query: 28  IPCHLAFIMDGNRRFAKKQKQGVVTGYRAGFTALMSIIKYCSELGVKYVTIYAFSIDNFR 87
           IP H+A IMDGN R+AK +   +  G+ AG  +L +++K C    +K +TI+ FS DN+ 
Sbjct: 81  IPKHVAVIMDGNGRWAKMRGLPLSEGHTAGMQSLKTMVKMCLRWEIKVLTIFMFSTDNWI 140

Query: 88  REPEEVKIIMDLMLE----KTEGILKEESVVHQYGVRVYFLGNLK 128
           R   EV+ +  L+      +TE I++ E++     + V  +   K
Sbjct: 141 RPKLEVEFLFSLLERIINSETEAIMRYETLTATLFIAVTLVDKKK 185


>IMGA|Medtr5g078690.1 Di-trans-poly-cis-decaprenylcistransferase
           chr05_pseudomolecule_IMGAG_V3 29150574-29150149 H
           EGN_Mt090430 20090702
          Length = 141

 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 35/54 (64%)

Query: 219 PEPDVLIRTSGESRLSNFLLWQTSHCTLYSPDALWPEIGLWNLVWAVLNFQRNH 272
           P PD+LIRTSGE R+SNF+LWQ ++  L+    LWP+ G    V A+  FQ+  
Sbjct: 81  PNPDLLIRTSGELRVSNFMLWQLAYAELFFNQKLWPDFGKDEFVEALSFFQKRQ 134


>IMGA|Medtr5g078720.1 Di-trans-poly-cis-decaprenylcistransferase
           chr05_pseudomolecule_IMGAG_V3 29165122-29164507 H
           EGN_Mt090430 20090702
          Length = 151

 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 77/158 (48%), Gaps = 17/158 (10%)

Query: 119 VRVYFLGNLKLLCEPLRVAAEKVMKATASNTKLLLFICVAYTSLDEIIHAVHESCNDKLK 178
           +++  +G+   L + L+     + + T  N++L L + + Y    +++ A  +S   K++
Sbjct: 6   IKISVIGDSSKLPKSLQKMIAIIEEKTKDNSRLHLIVAINYGGRYDVVQAC-KSVTKKVQ 64

Query: 179 NIILPDKPHTDXXXXXXXXXXXKDGIKLVDIEKHMYMALGPEPDVLIRTSGESRLSNFLL 238
           + I+    H +            + I   D+E        P PD+LIRT GE R+SNFLL
Sbjct: 65  DRII----HLEDI---------DENIIKNDLETKCIEF--PYPDLLIRTGGELRVSNFLL 109

Query: 239 WQTSHCTLYSPDALWPEIGLWNLVWAVLNF-QRNHSYL 275
           WQ ++  L+    LWP+    + V A+ +F QR   Y+
Sbjct: 110 WQLAYTELFFNRKLWPDFEKNDFVEALSSFQQRERRYV 147