Jatropha Genome Database

JcCA0304891.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0304891.10 - phase: 0 /partial
         (495 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g127940.1 Protein of unknown function DUF676, hydrola...   514   e-146
IMGA|Medtr1g008460.1 ZW18, putative chr01_pseudomolecule_IMGAG_V...   406   e-113
IMGA|Medtr1g008470.1 Protein of unknown function DUF676, hydrola...   155   3e-38

>IMGA|Medtr3g127940.1 Protein of unknown function DUF676,
           hydrolase-like chr03_pseudomolecule_IMGAG_V3
           32637681-32628919 H EGN_Mt090430 20090702
          Length = 782

 Score =  514 bits (1325), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 270/500 (54%), Positives = 336/500 (67%), Gaps = 32/500 (6%)

Query: 10  STSAVILKFELLQAPITENRLELLAYLEASSVAVHEFRIPPKALFGLHSYCPIHFDIFHA 69
           +T+ VILKFEL+ A   E+  +L    +AS  A+HEFRIPPKAL GLHSYCP+HFD  HA
Sbjct: 118 TTNGVILKFELIYASTLEDGDDL----DASPAAIHEFRIPPKALLGLHSYCPVHFDALHA 173

Query: 70  VLVEASVHVSLLKAGSHAHKSRFCDHQFLKTRSPCIEINFVIDQALASVSFVAMNKIMLI 129
           VLV+ SVHVSL +A S++  S+     F           FV  Q    V+ + +  IML+
Sbjct: 174 VLVDVSVHVSLRRAASYSSASKVPRRMF-----------FVPVQRFRGVTSLDVKDIMLV 222

Query: 130 KTLLVARDTLLEELQRLSKAIAQVIDFTDFTSKMNDINMLDSIRRADLGTAKGEVGGRGS 189
           + LL +RD LLEEL +++KAI + ID +DF SKMN+ ++++   +A+     GEV  +G 
Sbjct: 223 RALLTSRDLLLEELHKMNKAIGEAIDTSDFVSKMNNADLINFAAQANGFAIDGEVLEQGK 282

Query: 190 LQNGLEKANGIPDFEGDKLQYILSNDALENIFHLLGTQLSYLWSTFLQFHRTNKKKILRF 249
            QNGLE  NG  D    +  + LS   L N FH LG QL YLW  FL+ HR NK +IL  
Sbjct: 283 PQNGLEGGNGAQDIPNAENLHSLSQSELLNCFHSLGDQLHYLWKIFLKIHRENKTEILGL 342

Query: 250 LRDAWAKDRRTEWSIWMVYSKVEMPHHYISSGTHDASHIVVDKRVSSFWKLADDPAQTAA 309
           L + WAKDR+ EWSIWM+YSKVEMPHHYI+SG+ D+S   + KRVSS WKL D+P +TA 
Sbjct: 343 LHNTWAKDRKAEWSIWMIYSKVEMPHHYINSGSDDSSRRAMHKRVSSLWKLPDEPLETAI 402

Query: 310 TRAELHRRSIAQMRINASSIQDMYIFGDPLRVPIIYVERVINAPRRTFSENSYFRNLDLI 369
           + AELHRRSIAQMRIN  SIQDM IFGDPLR+P++ VERV+N PRR+ SE     ++ L+
Sbjct: 403 SCAELHRRSIAQMRINGRSIQDMQIFGDPLRIPVVLVERVMNVPRRSTSEIPLLGHVGLV 462

Query: 370 DSPSXXXXXXXXXXXXXXXXNSHKKSRELKIVVFVHGFQ---------------GHHLDL 414
           DS S                 S+   R LKIVVFVHGFQ               GHHLDL
Sbjct: 463 DSHSLTNGLGSHTFRKKSAPKSN--VRVLKIVVFVHGFQACLENFIAKLYTVFYGHHLDL 520

Query: 415 RLIRNQWLLIDPKIEILMSEANEEKTSGDFREMGLRLAQEVISFLKKKSDKYSRSGGLRD 474
           RL+RNQWLLIDPK+E LMSEANE+KT+GDF+EMG RLAQEVISF+K K D+ +R G L D
Sbjct: 521 RLVRNQWLLIDPKVEFLMSEANEDKTNGDFKEMGHRLAQEVISFVKSKMDRVTRYGKLGD 580

Query: 475 IKLSFVGHSIGNVIIRTALA 494
           IKLSFVGHS+GN+IIRTA+A
Sbjct: 581 IKLSFVGHSMGNLIIRTAIA 600


>IMGA|Medtr1g008460.1 ZW18, putative chr01_pseudomolecule_IMGAG_V3
           760654-767100 E EGN_Mt090430 20090702
          Length = 536

 Score =  406 bits (1044), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 218/408 (53%), Positives = 272/408 (66%), Gaps = 21/408 (5%)

Query: 11  TSAVILKFELLQAPITENRLELLAYLEASSVAVHEFRIPPKALFGLHSYCPIHFDIFHAV 70
           T+AVILKFEL+ AP  EN  +L A L+    AVHEFRIPPKAL GLHSYCP+HFD FHA 
Sbjct: 136 TTAVILKFELVYAPTVENGADLQASLDDYPAAVHEFRIPPKALLGLHSYCPVHFDAFHAA 195

Query: 71  LVEASVHVSLLKAGSHAHKSRFCDHQFLKTRSPCIEINFVIDQ-------ALASVSFVAM 123
           LV+ SVH SLL+A  +           LK  S       V+D+       A   V+ + M
Sbjct: 196 LVDVSVHASLLRAAPYPSA--------LKVPSNSRNAEVVVDKSYDTLNHAKGEVASIDM 247

Query: 124 NKIMLIKTLLVARDTLLEELQRLSKAIAQVIDFTDFTSKMNDINMLDSIRRAD-LGTAKG 182
             + L+K LL AR+ LL+ELQ+LSKA+ Q I+ ++F SK+N+  +L+ +  A+   TA G
Sbjct: 248 KNVTLLKALLTAREILLQELQKLSKAVDQTIEISEFLSKLNNEKILNYVAHANQFATAVG 307

Query: 183 EVGGRGSLQNGLEKANGIPDFE-GDKLQYILSNDALENIFHLLGTQLSYLWSTFLQFHRT 241
            +  +G+ QNGLE+ NG  D    +KL  +  +D L +  H +G QL YLW+TFL+FHR 
Sbjct: 308 -ISAQGNQQNGLERGNGALDLLIAEKLNSLSESDLL-HCCHSVGDQLFYLWNTFLKFHRD 365

Query: 242 NKKKILRFLRDAWAKDRRTEWSIWMVYSKVEMPHHYISSGTHDASHIVVDKRVSSFWKLA 301
           NK KIL FLRDAWAKDR+ EWSIWMVYSKV+MPHHYI+S   ++S+  V +RVSS  K +
Sbjct: 366 NKTKILEFLRDAWAKDRKAEWSIWMVYSKVQMPHHYINSRNDESSYRGVHRRVSSLLKSS 425

Query: 302 DDPAQTAATRAELHRRSIAQMRINASSIQDMYIFGDPLRVPIIYVERVINAPRRTFSENS 361
           D+P QTAATRAELHRRSIAQMRIN  SIQDM +FGDPLR+PI+ VERV NAPRRT SENS
Sbjct: 426 DEPPQTAATRAELHRRSIAQMRINNQSIQDMQMFGDPLRIPIVIVERVTNAPRRTISENS 485

Query: 362 YFRNLDLIDSPSXXXXXXXXXXXXXXXXNSHKKSRELKIVVFVHGFQG 409
           Y RN+ L DS +                 S+  +R LKIVVFVHGFQ 
Sbjct: 486 YLRNVILADSHNFEATHNSDTANQESAPQSN--ARVLKIVVFVHGFQA 531


>IMGA|Medtr1g008470.1 Protein of unknown function DUF676,
           hydrolase-like chr01_pseudomolecule_IMGAG_V3
           767520-769893 E EGN_Mt090430 20090702
          Length = 293

 Score =  155 bits (393), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 72/88 (81%), Positives = 82/88 (93%)

Query: 407 FQGHHLDLRLIRNQWLLIDPKIEILMSEANEEKTSGDFREMGLRLAQEVISFLKKKSDKY 466
            QGHHLDLRLIRNQW+L+DPK+E+LMS+ANE+KTSGDFREMG RLAQEVISF+KKK DK 
Sbjct: 24  LQGHHLDLRLIRNQWVLMDPKVEVLMSQANEDKTSGDFREMGQRLAQEVISFVKKKMDKE 83

Query: 467 SRSGGLRDIKLSFVGHSIGNVIIRTALA 494
           SR G LRDI+LSFVGHSIGN+IIRTA+A
Sbjct: 84  SRCGNLRDIRLSFVGHSIGNLIIRTAIA 111