Jatropha Genome Database

JcCA0304841.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0304841.10 + phase: 0 
         (407 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g148000.1 Protein of unknown function DUF829, eukaryo...   520   e-148
IMGA|Medtr4g129420.1 Protein of unknown function DUF829, eukaryo...   394   e-110

>IMGA|Medtr3g148000.1 Protein of unknown function DUF829, eukaryotic
           chr03_pseudomolecule_IMGAG_V3 38472901-38468483 F
           EGN_Mt090430 20090702
          Length = 406

 Score =  520 bits (1340), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 252/389 (64%), Positives = 307/389 (78%), Gaps = 4/389 (1%)

Query: 19  GIAVLFAWMSSEERHLKNYVELYSSLGWNSLVCHSQFLNMFFPDKAEALAFDILNRIVEE 78
           GI V+FAWMSSEE+HL  YV+LYSSLGWNSL+CHSQFLNMFFPDKA   A DILN +VE 
Sbjct: 22  GIVVVFAWMSSEEKHLMRYVDLYSSLGWNSLICHSQFLNMFFPDKATIPAVDILNELVEV 81

Query: 79  LKTRPCPLVFMSFSGGPKACMYKVLQIIEGKCKLQLNLDDRRLVRDCISGHIYDSSPVDF 138
           LK R CP+VF SFSGG KACM KVLQII G+C+   N+DD +LVRDCISG+IYDSSPVDF
Sbjct: 82  LKIRRCPIVFASFSGGAKACMLKVLQIIGGECETH-NMDDYQLVRDCISGYIYDSSPVDF 140

Query: 139 TSVLGREFIVHPSVLKMSRPPKVLSWMVNSISDCLDALFLNKFESQRAEYWQTLYSSVSM 198
           TS LG  F++HPSVLK+S PP+  SW+ N I+  LD+LFLN+FESQRA+YW+TLYS+ SM
Sbjct: 141 TSDLGVRFVLHPSVLKVSHPPRFASWIANGIASGLDSLFLNRFESQRADYWRTLYSTTSM 200

Query: 199 GAPYLIVCSESDDLASYQVICNFSQRLQELGADVKLVTMSGSPHVGHFRLYPFDYKAAVT 258
             PYLI CSE+DDLA ++V+ NF  RL++LG DVKLV  S SPHVGHFR +P +Y+AA+T
Sbjct: 201 QVPYLIFCSENDDLAPFEVVSNFFHRLKDLGGDVKLVKWSSSPHVGHFRHHPDEYEAAIT 260

Query: 259 ELLGKAAAVYSQRIRRLEGERLGVEGTHDEISEPIGDLRKAVESPNQSFCGVTIQPSDNF 318
           E+LGKA A+Y  + RR E E+LG+EGT DEI++P  +LRKA  + + SF G  + PS+N 
Sbjct: 261 EILGKAVAIYRHKNRRFEDEKLGIEGTRDEITDPFSELRKAATT-STSFQGFAVAPSEN- 318

Query: 319 FMPSSVGYYEGRDMGSLQDEHKEDLIHLHNPPRINAHGVLGQVLFDVCVPKTVEDWDIKS 378
             PSS+ YY+ +D+GS+ DE K   IHL   P INA+GVLGQ+LFDVCVPKTVEDWD++S
Sbjct: 319 LSPSSMEYYDDKDVGSVADERKGSFIHLPTRPSINANGVLGQILFDVCVPKTVEDWDVRS 378

Query: 379 SASLSRQPYSSTRRHAPFNPIKCILRSRL 407
           + S +    S TRRHAPFNPIKCI RSRL
Sbjct: 379 N-SKNAGLLSGTRRHAPFNPIKCIRRSRL 406


>IMGA|Medtr4g129420.1 Protein of unknown function DUF829, eukaryotic
           chr04_pseudomolecule_IMGAG_V3 30764910-30769219 E
           EGN_Mt090430 20090702
          Length = 410

 Score =  394 bits (1012), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 199/391 (50%), Positives = 273/391 (69%), Gaps = 8/391 (2%)

Query: 19  GIAVLFAWMSSEERHLKNYVELYSSLGWNSLVCHSQFLNMFFPDKAEALAFDILNRIVEE 78
           GI V+FAW+S  +  L+ +V+LYSSLGWNSLVC++ +L+ F  + A  LAF + + ++E 
Sbjct: 26  GIVVIFAWVSVPQNLLREFVDLYSSLGWNSLVCYAHYLSAFNEESAVPLAFYVFDELIEV 85

Query: 79  LKTRPCPLVFMSFSGGPKACMYKVLQIIEGKCKLQLNLDDRRLVRDCISGHIYDSSPVDF 138
           L+TRPCP+VF SFS G KAC+YK+ Q+ EG+C   LNL D +L R+C+SGHIYDS P+D 
Sbjct: 86  LRTRPCPVVFASFSAGSKACLYKLFQLSEGRCTAPLNLHDCQLFRNCVSGHIYDSGPLDV 145

Query: 139 TSVLGREFIVHPSVLKMSRPPKVLSWMVNSISDCLDALFLNKFESQRAEYWQTLYSSVSM 198
           TS  G  F +HPS+ K+  P K++SW+  S++  LDAL+L +FESQ A++WQ LYSSV+ 
Sbjct: 146 TSDFGFRFSLHPSIAKVPGPSKLVSWVAKSVASGLDALYLTRFESQSADHWQALYSSVNF 205

Query: 199 GAPYLIVCSESDDLASYQVICNFSQRLQELGADVKLVTMSGSPHVGHFRLYPFDYKAAVT 258
           GAP+LI+CSE+D+L  YQ I +F+QRL+ L ADV LV +  S HVGH+  +P  Y+AAV+
Sbjct: 206 GAPFLILCSENDELVRYQSIYDFAQRLRNLNADVNLVNLRSSSHVGHYEHHPIQYRAAVS 265

Query: 259 ELLGKAAAVYSQRIRRLEGERLGVEGTHDEISEPIGDLRKAVESPNQSFCGVTIQPSDNF 318
            LL KA + YS+++  LE ER G++G HDEISE I DL+K   + N+SF  V + PSD+F
Sbjct: 266 HLLEKAVSTYSRKV-ILEQERTGIDGMHDEISELICDLQKVAINSNESFRRVAVGPSDHF 324

Query: 319 FMPSSVGYYEG-RDMGSLQDEHKEDLIHLHNPPRINAHGVLGQVLFDVCVPKTVEDW-DI 376
           F+PSS G+    R+    +DE KE+ +   + P I+AH VLGQ LFDVCVPK VE W D+
Sbjct: 325 FLPSSAGHNNNDRESVIPRDEQKEEPVCAPSFPSISAHSVLGQFLFDVCVPKNVEGWDDV 384

Query: 377 KSSASLSRQPYSSTRRHAPFNPIKCILRSRL 407
           K   + + +      R +PF  IK I RSRL
Sbjct: 385 KFCGNRNGRS-----RVSPFRGIKRIGRSRL 410