Jatropha Genome Database

JcCA0304601.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0304601.20 + phase: 0 /partial
         (194 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g115680.1 Alcohol dehydrogenase superfamily, zinc-con...   241   1e-64
IMGA|AC202489_15.1 Alcohol dehydrogenase superfamily, zinc-conta...   235   1e-62
IMGA|Medtr2g104200.1 Alcohol dehydrogenase superfamily, zinc-con...    87   4e-18
IMGA|Medtr2g104260.1 Alcohol dehydrogenase superfamily, zinc-con...    63   8e-11
IMGA|Medtr2g104230.1 Alcohol dehydrogenase superfamily, zinc-con...    55   1e-08
IMGA|Medtr5g102590.1 Alcohol dehydrogenase superfamily, zinc-con...    47   5e-06

>IMGA|Medtr4g115680.1 Alcohol dehydrogenase superfamily,
           zinc-containing chr04_pseudomolecule_IMGAG_V3
           26838003-26836216 H EGN_Mt090430 20090702
          Length = 350

 Score =  241 bits (615), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 120/182 (65%), Positives = 144/182 (79%), Gaps = 6/182 (3%)

Query: 9   VSNKQVIFKDYANGYPKESDMFLSTKTIKLEVPEGTNGVLVKNLYLSCDPSMGMRMRTKV 68
           V NKQVIFKDY NG  +E D+++ST  IKL+VP+G+N VLVKNLYLSCDP M   MR   
Sbjct: 10  VQNKQVIFKDYVNGNLQEDDLYISTSKIKLQVPQGSNAVLVKNLYLSCDPVMQFLMRK-- 67

Query: 69  EGFVMEPFK---PGSVVEGLGVAKVVESRHPDFKKGDLVWGLTTWEEYSLIQMPF-LFKI 124
           + F+M  +    PGS + G GVAKV++S HP+F +GDLVWG+T+WEEYSLIQ P  L+KI
Sbjct: 68  DEFLMSGYHYYVPGSPINGFGVAKVLDSGHPNFSEGDLVWGITSWEEYSLIQNPDKLYKI 127

Query: 125 QHTDVPLSHYTGILGMSGLTAYAGFYEVGAPKKGDYVFVSAASGAVGQLVGQFAKLSGCY 184
            HTDVPLS+YTGIL M G+TAYAG +EVG+ KKG+ VF+SAASGAVGQL GQFAKL GCY
Sbjct: 128 HHTDVPLSYYTGILSMPGITAYAGIFEVGSLKKGESVFISAASGAVGQLAGQFAKLLGCY 187

Query: 185 VV 186
           VV
Sbjct: 188 VV 189


>IMGA|AC202489_15.1 Alcohol dehydrogenase superfamily,
           zinc-containing AC202489.10 93691-90625 E EGN_Mt090430
           20090702
          Length = 219

 Score =  235 bits (599), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 120/181 (66%), Positives = 144/181 (79%), Gaps = 5/181 (2%)

Query: 9   VSNKQVIFKDYANGYPKESDMFLSTKTIKLEVPEGTNGV-LVKNLYLSCDPSMGMRM-RT 66
           V NKQVI +DY +G+PKESDM +   TI L +P+G+N V L+KNLYLSCDP + + M + 
Sbjct: 4   VRNKQVILRDYVSGFPKESDMNVVDSTIILNLPQGSNDVVLLKNLYLSCDPYLRIFMAKD 63

Query: 67  KVEGFVMEPFKPGSVVEGLGVAKVVESRHPDFKKGDLVWGLTTWEEYSLI-QMPFLFKIQ 125
            + G  +    PGS + GLGV+KVVES HPD+KK DLVWG+T WEEYSL+     LFKI+
Sbjct: 64  TIAG--LGGLTPGSPLTGLGVSKVVESGHPDYKKDDLVWGMTKWEEYSLVPAAQILFKIE 121

Query: 126 HTDVPLSHYTGILGMSGLTAYAGFYEVGAPKKGDYVFVSAASGAVGQLVGQFAKLSGCYV 185
           HTDVPLS+YTGILGM G+TAYAGF+EVG+PKKG+ VFVSAASGAVGQLVGQFAKL GCYV
Sbjct: 122 HTDVPLSYYTGILGMPGMTAYAGFFEVGSPKKGENVFVSAASGAVGQLVGQFAKLHGCYV 181

Query: 186 V 186
           V
Sbjct: 182 V 182


>IMGA|Medtr2g104200.1 Alcohol dehydrogenase superfamily,
           zinc-containing chr02_pseudomolecule_IMGAG_V3
           24509245-24512359 E EGN_Mt090430 20090702
          Length = 350

 Score = 87.4 bits (215), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 96/188 (51%), Gaps = 9/188 (4%)

Query: 6   EEIVSNKQVIFKDYAN-GYPKESDMFLSTKTIKL---EVPEGTNGVLVKNLYLSCDPSMG 61
           +E+V +++     Y+  G P    + L T ++ L    +P+  N + V+ L LS DP + 
Sbjct: 3   DEVVESREWYLAGYSTEGVPTSDHLKLRTVSLSLADDSIPD--NHLAVETLLLSVDPYLR 60

Query: 62  MRMRTKVEGFVMEPFKPGSVVEGLGVAKVVESRHPDFKKGDLVWGLTT-WEEYSLI-QMP 119
            R+    EG  +  ++   V+    V +V+ S+   + +GD++        EYS++    
Sbjct: 61  GRITGTSEGLFISQYQLNQVITVFAVVRVIRSKDSKYSEGDILLNPNAPVAEYSIVPSSQ 120

Query: 120 FLFKIQHTD-VPLSHYTGILGMSGLTAYAGFYEVGAPKKGDYVFVSAASGAVGQLVGQFA 178
              KI  ++ + LS Y G LG+ G  A+ G   +  PK G  VF+SAASGAVG   GQ A
Sbjct: 121 ITRKIDTSNGISLSDYLGSLGVPGFAAWVGIEVLADPKPGSNVFISAASGAVGINAGQLA 180

Query: 179 KLSGCYVV 186
           K+ GC V+
Sbjct: 181 KIRGCRVI 188


>IMGA|Medtr2g104260.1 Alcohol dehydrogenase superfamily,
           zinc-containing chr02_pseudomolecule_IMGAG_V3
           24520509-24521288 E EGN_Mt090430 20090702
          Length = 109

 Score = 63.2 bits (152), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 6/100 (6%)

Query: 90  VVESRHPDFKKGD-LVWGLTTWEEYSLIQMPFLF-KIQHTD-VPLSHYTGILGMSGLTAY 146
           +++S+   + +GD L+ G     EYS++    +  KI   + + LS Y G LG+ G  A+
Sbjct: 3   IIDSK---YSEGDILLNGYGLVAEYSIVPSSHIIRKIDPANGISLSDYLGSLGVPGFAAW 59

Query: 147 AGFYEVGAPKKGDYVFVSAASGAVGQLVGQFAKLSGCYVV 186
            G   +G PK    VF+SAASGAVG + GQ AK+ GC V+
Sbjct: 60  LGIEVLGNPKPASNVFISAASGAVGMIAGQLAKIRGCRVI 99


>IMGA|Medtr2g104230.1 Alcohol dehydrogenase superfamily,
           zinc-containing chr02_pseudomolecule_IMGAG_V3
           24517034-24518374 E EGN_Mt090430 20090702
          Length = 211

 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 25/49 (51%), Positives = 34/49 (69%)

Query: 138 LGMSGLTAYAGFYEVGAPKKGDYVFVSAASGAVGQLVGQFAKLSGCYVV 186
           +G++G  A+ G   +G PK G +VF+SAASGAVG   GQ AK+ GC V+
Sbjct: 1   MGVAGFAAWLGIEVIGDPKPGSHVFISAASGAVGMSAGQLAKIRGCRVI 49


>IMGA|Medtr5g102590.1 Alcohol dehydrogenase superfamily,
          zinc-containing chr05_pseudomolecule_IMGAG_V3
          41080511-41080909 H EGN_Mt090430 20090702
          Length = 64

 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 34/62 (54%), Gaps = 2/62 (3%)

Query: 29 MFLSTKTIKLEVP-EGTNGVLVKNLYLSCDPSMGMRMRTKVEGFVMEPFKPGSVVEGLGV 87
          M+L T TI L++P + +  VLVKNL LSCDP M    RT         F P S + G GV
Sbjct: 1  MYLKTSTISLQLPKDASEAVLVKNLVLSCDPYMRGTKRTGKNNLFYS-FSPDSPIVGYGV 59

Query: 88 AK 89
           K
Sbjct: 60 VK 61