Jatropha Genome Database
- JcCA0304431.30
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0304431.30 - phase: 1 /pseudo/partial
(119 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|AC232874_25.1 Natural resistance-associated macrophage prot... 114 9e-27
IMGA|AC235748_28.1 Natural resistance-associated macrophage prot... 114 9e-27
IMGA|Medtr4g125470.1 Natural resistance-associated macrophage pr... 113 2e-26
IMGA|Medtr5g016260.1 Natural resistance-associated macrophage pr... 112 4e-26
IMGA|AC233651_6.1 Natural resistance-associated macrophage prote... 111 1e-25
IMGA|Medtr3g100650.1 Natural resistance-associated macrophage pr... 75 9e-15
IMGA|Medtr3g100630.1 Natural resistance-associated macrophage pr... 62 7e-11
IMGA|Medtr7g121800.1 Natural resistance-associated macrophage pr... 51 2e-07
>IMGA|AC232874_25.1 Natural resistance-associated macrophage protein
AC232874.1 75295-80160 E EGN_Mt090430 20090702
Length = 528
Score = 114 bits (286), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 53/63 (84%), Positives = 59/63 (93%)
Query: 54 SVLDPGNLERDLQAGAIAGYSLLWLLVWATVMGLLIQVLSARVGVAIGRHLAKLCREEYP 113
+ LDPGNLE DLQAGAIAGYSLLWLL+WAT+MGLLIQ LSARVGVA GRHLA+LC+EEYP
Sbjct: 82 AFLDPGNLEGDLQAGAIAGYSLLWLLMWATLMGLLIQSLSARVGVATGRHLAELCKEEYP 141
Query: 114 NWS 116
NW+
Sbjct: 142 NWA 144
>IMGA|AC235748_28.1 Natural resistance-associated macrophage protein
AC235748.1 108550-103680 E EGN_Mt090430 20090702
Length = 528
Score = 114 bits (286), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 53/63 (84%), Positives = 59/63 (93%)
Query: 54 SVLDPGNLERDLQAGAIAGYSLLWLLVWATVMGLLIQVLSARVGVAIGRHLAKLCREEYP 113
+ LDPGNLE DLQAGAIAGYSLLWLL+WAT+MGLLIQ LSARVGVA GRHLA+LC+EEYP
Sbjct: 82 AFLDPGNLEGDLQAGAIAGYSLLWLLMWATLMGLLIQSLSARVGVATGRHLAELCKEEYP 141
Query: 114 NWS 116
NW+
Sbjct: 142 NWA 144
>IMGA|Medtr4g125470.1 Natural resistance-associated macrophage
protein chr04_pseudomolecule_IMGAG_V3 29600107-29602350
E EGN_Mt090430 20090702
Length = 532
Score = 113 bits (283), Expect = 2e-26, Method: Composition-based stats.
Identities = 50/65 (76%), Positives = 60/65 (92%)
Query: 54 SVLDPGNLERDLQAGAIAGYSLLWLLVWATVMGLLIQVLSARVGVAIGRHLAKLCREEYP 113
+ LDPGN+E DLQAGAIAGYSLLWLL+W+T+MGLLIQ+LSAR+GVA GRHLA+LCREEY
Sbjct: 99 AFLDPGNIEGDLQAGAIAGYSLLWLLMWSTIMGLLIQLLSARLGVATGRHLAELCREEYS 158
Query: 114 NWSTI 118
NW+ +
Sbjct: 159 NWARL 163
>IMGA|Medtr5g016260.1 Natural resistance-associated macrophage
protein chr05_pseudomolecule_IMGAG_V3 5667707-5663755 E
EGN_Mt090430 20090702
Length = 514
Score = 112 bits (280), Expect = 4e-26, Method: Composition-based stats.
Identities = 51/65 (78%), Positives = 59/65 (90%)
Query: 54 SVLDPGNLERDLQAGAIAGYSLLWLLVWATVMGLLIQVLSARVGVAIGRHLAKLCREEYP 113
+ LDPGNLE DLQ+GAIAGYSLLWLL+WAT MGLLIQ+LSAR+GVA GRHLA+LCR+EYP
Sbjct: 68 AFLDPGNLEGDLQSGAIAGYSLLWLLMWATAMGLLIQLLSARLGVATGRHLAELCRDEYP 127
Query: 114 NWSTI 118
W+ I
Sbjct: 128 TWARI 132
>IMGA|AC233651_6.1 Natural resistance-associated macrophage protein
AC233651.1 16081-14124 E EGN_Mt090430 20090702
Length = 451
Score = 111 bits (277), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 50/63 (79%), Positives = 59/63 (93%)
Query: 54 SVLDPGNLERDLQAGAIAGYSLLWLLVWATVMGLLIQVLSARVGVAIGRHLAKLCREEYP 113
+ LDPGN+E DLQAGAIAGYSLLWLL+W+T+MGLLIQ+LSAR+GVA GRHLA+LCREEY
Sbjct: 4 AFLDPGNIEGDLQAGAIAGYSLLWLLMWSTIMGLLIQLLSARLGVATGRHLAELCREEYS 63
Query: 114 NWS 116
NW+
Sbjct: 64 NWA 66
>IMGA|Medtr3g100650.1 Natural resistance-associated macrophage
protein chr03_pseudomolecule_IMGAG_V3 24149128-24144262
F EGN_Mt090430 20090702
Length = 531
Score = 75.1 bits (183), Expect = 9e-15, Method: Composition-based stats.
Identities = 32/58 (55%), Positives = 43/58 (74%)
Query: 56 LDPGNLERDLQAGAIAGYSLLWLLVWATVMGLLIQVLSARVGVAIGRHLAKLCREEYP 113
LDPGN+E DLQAGA GY LLWL++ + L+IQ L+A +GV G+HL+++C EYP
Sbjct: 52 LDPGNMETDLQAGANHGYELLWLVLIGLIFALIIQSLAANLGVTTGKHLSEVCEVEYP 109
>IMGA|Medtr3g100630.1 Natural resistance-associated macrophage
protein chr03_pseudomolecule_IMGAG_V3 24137983-24131907
E EGN_Mt090430 20090702
Length = 542
Score = 62.0 bits (149), Expect = 7e-11, Method: Composition-based stats.
Identities = 30/58 (51%), Positives = 43/58 (74%)
Query: 56 LDPGNLERDLQAGAIAGYSLLWLLVWATVMGLLIQVLSARVGVAIGRHLAKLCREEYP 113
LDPGN+E DLQAGA GY LLW+++ + +IQ L+A +GV G+HL+++C+ EYP
Sbjct: 59 LDPGNMETDLQAGANHGYELLWIILIGLIFACIIQSLAANLGVCTGKHLSEICKAEYP 116
>IMGA|Medtr7g121800.1 Natural resistance-associated macrophage
protein chr07_pseudomolecule_IMGAG_V3 28786769-28780055
E EGN_Mt090430 20090702
Length = 1348
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 35/63 (55%)
Query: 56 LDPGNLERDLQAGAIAGYSLLWLLVWATVMGLLIQVLSARVGVAIGRHLAKLCREEYPNW 115
+DPG ++ GA G+ L+ + + Q LSARVGV GR LA++C +EY W
Sbjct: 47 VDPGKWVASIEGGARFGFDLVAFALIFNFAAIFCQYLSARVGVITGRDLAQICSDEYDTW 106
Query: 116 STI 118
+ +
Sbjct: 107 TCL 109