Jatropha Genome Database
- JcCA0304431.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0304431.10 - phase: 2 /TE
(440 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|CU179634_24.1 Polynucleotidyl transferase, Ribonuclease H f... 137 1e-32
IMGA|Medtr4g080020.1 Polynucleotidyl transferase, Ribonuclease H... 132 4e-31
IMGA|Medtr5g072700.1 Retrotransposon gag protein; Polynucleotidy... 130 1e-30
IMGA|Medtr7g045790.1 Polynucleotidyl transferase, Ribonuclease H... 124 9e-29
IMGA|Medtr4g079130.1 Polynucleotidyl transferase, Ribonuclease H... 122 3e-28
IMGA|Medtr5g048830.1 Polynucleotidyl transferase, Ribonuclease H... 120 2e-27
IMGA|Medtr8g044870.1 Reverse transcriptase, identical chr08_pseu... 108 6e-24
IMGA|Medtr4g157500.1 polyprotein-like, putative chr04_pseudomole... 105 5e-23
IMGA|Medtr5g086550.1 Reverse transcriptase, RNA-dependent DNA po... 95 7e-20
IMGA|Medtr3g058930.1 Polynucleotidyl transferase, Ribonuclease H... 95 7e-20
IMGA|Medtr7g025490.1 Reverse transcriptase, RNA-dependent DNA po... 89 3e-18
IMGA|Medtr4g045170.1 hypothetical protein chr04_pseudomolecule_I... 76 4e-14
IMGA|Medtr3g101210.1 Reverse transcriptase, RNA-dependent DNA po... 75 9e-14
IMGA|Medtr3g110550.1 Reverse transcriptase, RNA-dependent DNA po... 74 2e-13
IMGA|Medtr5g086750.1 Reverse transcriptase, RNA-dependent DNA po... 72 4e-13
IMGA|Medtr5g099250.1 Reverse transcriptase, RNA-dependent DNA po... 64 1e-10
IMGA|Medtr8g081950.1 lectin receptor kinase, related chr08_pseud... 60 2e-09
IMGA|Medtr1g102700.1 hypothetical protein chr01_pseudomolecule_I... 59 4e-09
IMGA|Medtr5g028800.1 Reverse transcriptase, RNA-dependent DNA po... 49 4e-06
>IMGA|CU179634_24.1 Polynucleotidyl transferase, Ribonuclease H fold
CU179634.6 87152-89450 H EGN_Mt090430 20090702
Length = 688
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 120/200 (60%), Gaps = 1/200 (0%)
Query: 75 LYGLKQAPRAWYVRIDSYLIQXGFRRSDNEATLYVENLKDGEKLILSLYVNDMLVIGSVF 134
LYGLKQA R WY ++ L G+ S ++ +L+ + + + L +YV+D+L+ G+
Sbjct: 481 LYGLKQASRQWYEKLTEALHTRGYEHSPHDYSLFYKK-RGASNVFLGVYVDDILLTGTDT 539
Query: 135 QLLNNFKKEMQQEFEMSYLGLMNYFLGMEFDQMEQGIFLTQRKYAWDVLKKFQLEQDKSV 194
++ K+ + +F++ LG ++YFLG+E + GI ++QRK+ D+LK+F + +
Sbjct: 540 NEIDELKRFLDNQFKIKDLGRLHYFLGLEVLYKDDGILVSQRKFVLDLLKEFNCDHMAPL 599
Query: 195 STPLVHNEKLTSNDGEDKVDSNVYRSLIGSLLYLTSTRPDLMFSASLLSRFMHLPSQAHL 254
S+PL N KL S++G+ D YR LIG L +LT TR DL + LLS++M P + HL
Sbjct: 600 SSPLDPNIKLRSHEGKVLDDPTYYRKLIGKLNFLTHTRLDLAYGVQLLSQYMQDPREPHL 659
Query: 255 NAARIVLRYIKGTIDFGILL 274
+AA +LRY+K G+ +
Sbjct: 660 HAAFHMLRYLKKDPTLGVFM 679
>IMGA|Medtr4g080020.1 Polynucleotidyl transferase, Ribonuclease H fold
chr04_pseudomolecule_IMGAG_V3 16287611-16283185 H
EGN_Mt090430 20090702
Length = 1275
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 114/206 (55%), Gaps = 1/206 (0%)
Query: 72 RRPLYGLKQAPRAWYVRIDSYLIQXGFRRSDNEATLYVENLKDGEKLILSLYVNDMLVIG 131
++ LYGLKQA R WY ++ S LIQ + ++ ++ +L+++ D ++L +YV+D+++ G
Sbjct: 881 KKSLYGLKQASRQWYEKLTSVLIQQHYIQASSDHSLFIKKSSDSFTILL-VYVDDIILAG 939
Query: 132 SVFQLLNNFKKEMQQEFEMSYLGLMNYFLGMEFDQMEQGIFLTQRKYAWDVLKKFQLEQD 191
+ N K + F++ LG + YFLG+E + GI L QRKY D+L
Sbjct: 940 TSLLEFQNIKSILDTSFKIKDLGQLKYFLGIEVAHSKLGISLYQRKYCLDLLHDSGHIGS 999
Query: 192 KSVSTPLVHNEKLTSNDGEDKVDSNVYRSLIGSLLYLTSTRPDLMFSASLLSRFMHLPSQ 251
K +STP + KL + D YR L+G LLYL +TRPD+ F LS+F+ P+
Sbjct: 1000 KPISTPSDPSTKLHHDTSTPYDDIPAYRRLVGRLLYLNNTRPDITFITQQLSQFLSNPTI 1059
Query: 252 AHLNAARIVLRYIKGTIDFGILLERK 277
AH NAA LRY+K G+ R
Sbjct: 1060 AHHNAALRTLRYLKSCPGKGLFFPRN 1085
>IMGA|Medtr5g072700.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr05_pseudomolecule_IMGAG_V3 25937763-25933415 H
EGN_Mt090430 20090702
Length = 1413
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/228 (33%), Positives = 121/228 (53%), Gaps = 4/228 (1%)
Query: 73 RPLYGLKQAPRAWYVRIDSYLIQXGFRRSDNEATLYVENLKDGEKLILSLYVNDMLVIGS 132
+ LYGLKQA R WY ++ S L+ + +S ++ +L+++ +L +YV+D+++ G+
Sbjct: 1027 KSLYGLKQASRKWYEKLTSLLVHHHYLQSTSDHSLFIKKTYTSFTALL-VYVDDVIITGT 1085
Query: 133 VFQLLNNFKKEMQQEFEMSYLGLMNYFLGMEFDQMEQGIFLTQRKYAWDVLKKFQLEQDK 192
+ K + E+ LG + YFLG+E QGI L QRKY D+L K
Sbjct: 1086 SLSEFQDIKAILHSALEIKDLGQLKYFLGLEVAHSSQGISLCQRKYCLDLLTDIGFLAAK 1145
Query: 193 SVSTPLVHNEKLTSNDGEDKVDSNVYRSLIGSLLYLTSTRPDLMFSASLLSRFMHLPSQA 252
STP + KL ++ G D YR LIG L+YLT+TRP + F+ LS+F++ P++
Sbjct: 1146 PASTPSDPSCKLHADGGPPFSDIPSYRRLIGRLIYLTNTRPYITFATQQLSQFLNSPTEK 1205
Query: 253 HLNAARIVLRYIKGTIDFGILLERKK---MENYKDMLIAIGLEVWRIV 297
H AA +LRY+K + G+ R + Y D A L+ R +
Sbjct: 1206 HYIAATRILRYLKKSPGQGLFFPRDSSLFLSGYSDADWAGCLDSRRSI 1253
>IMGA|Medtr7g045790.1 Polynucleotidyl transferase, Ribonuclease H
fold chr07_pseudomolecule_IMGAG_V3 11036769-11039177 H
EGN_Mt090430 20090702
Length = 710
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 113/210 (53%), Gaps = 4/210 (1%)
Query: 78 LKQAPRAWYVRIDSYLIQXGFRRSDNEATLYVENLKDGEKLILSLYVNDMLVIGSVFQLL 137
++ A R WY ++ S L+ G++++ + +L++++ + L +YV+D+++ G+
Sbjct: 382 IRLASRKWYEKLASLLVNHGYKQASADHSLFIKH-STTQFTALLVYVDDIILAGNSLDEF 440
Query: 138 NNFKKEMQQEFEMSYLGLMNYFLGMEFDQMEQGIFLTQRKYAWDVLKKFQLEQDKSVSTP 197
K + F++ LG + YFLG+E + GI L QRKY D+L L K V+TP
Sbjct: 441 TFIKNILHNSFKIKDLGQLKYFLGLEVAHSKLGISLCQRKYGLDLLSDTGLLDSKPVATP 500
Query: 198 LVHNEKLTSNDGEDKVDSNVYRSLIGSLLYLTSTRPDLMFSASLLSRFMHLPSQAHLNAA 257
+ KL +D D YR L+G LLYL +TRPD+ F LS+F+ P+Q H NAA
Sbjct: 501 SDPSIKLYHDDSPLYTDIPAYRRLVGRLLYLNATRPDITFITQQLSQFLSKPTQTHYNAA 560
Query: 258 RIVLRYIKGTIDFGILLERKKM---ENYKD 284
VLRY+K G+ R + + Y D
Sbjct: 561 LRVLRYLKTCPGKGLHFPRSSLPYIQGYSD 590
>IMGA|Medtr4g079130.1 Polynucleotidyl transferase, Ribonuclease H fold
chr04_pseudomolecule_IMGAG_V3 15761100-15765439 H
EGN_Mt090430 20090702
Length = 1414
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 113/209 (54%), Gaps = 1/209 (0%)
Query: 73 RPLYGLKQAPRAWYVRIDSYLIQXGFRRSDNEATLYVENLKDGEKLILSLYVNDMLVIGS 132
+ LYGLKQA R WY ++ S L + ++ ++ +L+V+ ++L +YV+D+++ G+
Sbjct: 1036 KSLYGLKQASRKWYEKLTSVLFDQHYTQATSDYSLFVKKTSTSFTVLL-VYVDDIILAGN 1094
Query: 133 VFQLLNNFKKEMQQEFEMSYLGLMNYFLGMEFDQMEQGIFLTQRKYAWDVLKKFQLEQDK 192
++ K + F++ LG + YFLG+E + GI L QRKY D+L K
Sbjct: 1095 SISEFSHIKSILDSLFKIKDLGQLKYFLGIEVAHSKLGISLCQRKYCLDLLADIGSLGSK 1154
Query: 193 SVSTPLVHNEKLTSNDGEDKVDSNVYRSLIGSLLYLTSTRPDLMFSASLLSRFMHLPSQA 252
+STP + KL + D R L+G LLYL +TRPD+ F LS+F+ P+QA
Sbjct: 1155 PISTPSDSSIKLHLDSSSPFEDVPACRRLVGRLLYLNNTRPDITFITQQLSQFLSQPTQA 1214
Query: 253 HLNAARIVLRYIKGTIDFGILLERKKMEN 281
H +AA VL+Y+K G+ R N
Sbjct: 1215 HHSAALRVLKYLKSCPGKGLFFPRSSSLN 1243
>IMGA|Medtr5g048830.1 Polynucleotidyl transferase, Ribonuclease H fold
chr05_pseudomolecule_IMGAG_V3 20699955-20695616 H
EGN_Mt090430 20090702
Length = 1396
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 120/230 (52%), Gaps = 6/230 (2%)
Query: 72 RRPLYGLKQAPRAWYVRIDSYLIQXGFRRSDNEATLYVENLKDGEK-LILSLYVNDMLVI 130
+ LYGLKQA R WY ++ S L++ + ++ ++ +L+ + K G IL +YV+D+++
Sbjct: 1009 NKSLYGLKQASRKWYDKLTSILLKHQYTQAHSDHSLFTK--KTGTSYTILLVYVDDIILA 1066
Query: 131 GSVFQLLNNFKKEMQQEFEMSYLGLMNYFLGMEFDQMEQGIFLTQRKYAWDVLKKFQLEQ 190
G + K + F++ LG + +FLG+E + GI L Q+KY D+L
Sbjct: 1067 GDSLEEFQYIKSILDTLFKIKDLGQLKFFLGLEVAHSQLGISLCQKKYCLDLLADSGTIG 1126
Query: 191 DKSVSTPLVHNEKLTSNDGEDKVDSNVYRSLIGSLLYLTSTRPDLMFSASLLSRFMHLPS 250
K STP + KL + D YR LIG LLYL +TRPD+ + LS+F+ P+
Sbjct: 1127 SKPASTPSDPSLKLHKDGALPYEDIPSYRRLIGRLLYLNTTRPDITYITQQLSQFLSAPT 1186
Query: 251 QAHLNAARIVLRYIKGTIDFGILLERK---KMENYKDMLIAIGLEVWRIV 297
H +AA VLRY+K G+ R +++ Y D A L+ R +
Sbjct: 1187 HTHHSAALRVLRYLKNCPGKGLFFPRNSPLQLQGYSDADWAGCLDTRRSI 1236
>IMGA|Medtr8g044870.1 Reverse transcriptase, identical
chr08_pseudomolecule_IMGAG_V3 10146606-10147487 H
EGN_Mt090430 20090702
Length = 293
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 96/166 (57%), Gaps = 1/166 (0%)
Query: 72 RRPLYGLKQAPRAWYVRIDSYLIQXGFRRSDNEATLYVENLKDGEKLILSLYVNDMLVIG 131
+ LYGL+QA WY ++ + LI G++++ ++A+L++++ ++L +YV+D+++ G
Sbjct: 127 NKSLYGLQQASMKWYEKLTNILISTGYKQAASDASLFIKHTHSSFTILL-VYVDDVILAG 185
Query: 132 SVFQLLNNFKKEMQQEFEMSYLGLMNYFLGMEFDQMEQGIFLTQRKYAWDVLKKFQLEQD 191
N K + F++ +G + YFLG+E + GI L QRKY D+L+ L
Sbjct: 186 DTLSEFNTIKGVLHDAFKIKDIGQLKYFLGLEVAHSKSGISLCQRKYCLDLLEDSGLTGS 245
Query: 192 KSVSTPLVHNEKLTSNDGEDKVDSNVYRSLIGSLLYLTSTRPDLMF 237
K ++TP + KL ++ D YR LIG LLYL +TRPD+ +
Sbjct: 246 KPMNTPSDPSIKLHNDSAPSFPDIPAYRRLIGRLLYLNTTRPDITY 291
>IMGA|Medtr4g157500.1 polyprotein-like, putative
chr04_pseudomolecule_IMGAG_V3 39269652-39268814 H
EGN_Mt090430 20090702
Length = 260
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 91/175 (52%), Gaps = 3/175 (1%)
Query: 114 DGEKLILSLYVNDMLVIGSVFQLLNNFKKEMQQEFEMSYLGLMNYFLGMEFDQMEQGIFL 173
D IL +YV+D+++ G+ + K + F++ LG + Y LG+E +QGI L
Sbjct: 7 DSSFTILLVYVDDIILAGNSLSEFQHIKSILHSSFKIKDLGQLKYVLGLEVAHSKQGISL 66
Query: 174 TQRKYAWDVLKKFQLEQDKSVSTPLVHNEKLTSNDGEDKVDSNVYRSLIGSLLYLTSTRP 233
QRKY D+L K VST + KL ++ D YR LIG LLYL STRP
Sbjct: 67 CQRKYCLDLLSDSGTINSKPVSTSSDASLKLHNDSSPPYEDIPSYRRLIGRLLYLNSTRP 126
Query: 234 DLMFSASLLSRFMHLPSQAHLNAARIVLRYIKGTIDFGILLERKK---MENYKDM 285
D+ F LS+F+ P+Q H NAA VL+Y+K G+ R ++ + D+
Sbjct: 127 DITFITQQLSQFLSKPTQTHHNAALRVLKYLKCCPGKGLFFPRNSSLHLQGFSDV 181
>IMGA|Medtr5g086550.1 Reverse transcriptase, RNA-dependent DNA
polymerase chr05_pseudomolecule_IMGAG_V3
33218578-33217607 H EGN_Mt090430 20090702
Length = 309
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 86/156 (55%), Gaps = 14/156 (8%)
Query: 122 LYVNDMLVIGSVFQLLNNFKKEMQQEFEMSYLGLMNYFLGMEFDQMEQGIFLTQRKYAWD 181
+YV+D+++ G+ + NFK+ ++Q F M LG + YFLG+E + G+F+ QRKY D
Sbjct: 5 IYVDDLVIAGNDTDTITNFKQYLKQCFHMKDLGPLKYFLGLELARGANGLFMCQRKYTLD 64
Query: 182 VLKKFQLEQDKSVSTPLVHNEKLTSNDGEDKVDSNVYRSLIGSLLYLTSTRPDLMFSASL 241
+L + ++ K + P+ N+KL + G D + YR LI L+YLT P++ +S +
Sbjct: 65 ILDECKMLDCKPSTFPMEQNQKLVLDKGPTCSDPSRYRRLISRLIYLTIMHPEITYSVHI 124
Query: 242 LSRFMHLPSQAHLNAARIVLRYIKGTIDFGILLERK 277
L+ VLRY+K + GI+L ++
Sbjct: 125 LTMR--------------VLRYLKSSPGQGIILPKE 146
>IMGA|Medtr3g058930.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 13084099-13087565 H
EGN_Mt090430 20090702
Length = 563
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 96/203 (47%), Gaps = 42/203 (20%)
Query: 73 RPLYGLKQAPRAWYVRIDSYLIQXGFRRSDNEATLYVENLKDGEKLILSLYVNDMLVIGS 132
+ LYGLKQAPRAW RI+ + ++ GF++ E +YV+ + LI+ L
Sbjct: 270 KALYGLKQAPRAWNKRIEKFFVEQGFKKCLAEHGVYVKGSEGTSLLIICL---------- 319
Query: 133 VFQLLNNFKKEMQQEFEMSYLGLMNYFLGMEFDQMEQGIFLTQRKYAWDVLKKFQLEQDK 192
E + +G+ L Q KY ++ KKF + D
Sbjct: 320 ------------------------------EILRTTKGLILNQTKYDTEIQKKFNM-LDF 348
Query: 193 SVSTPLVHNEKLTSNDGEDK-VDSNVYRSLIGSLLYLTSTRPDLMFSASLLSRFMHLPSQ 251
+ S L + + EDK VD + R LIG L YL +R D+ +S ++S+FM P +
Sbjct: 349 NSSITLAYANNINEVKEEDKGVDPTILRRLIGLLRYLCQSRLDISYSVGIVSKFMSNPLK 408
Query: 252 AHLNAARIVLRYIKGTIDFGILL 274
H AA+ ++RYI GT+ +GIL
Sbjct: 409 THFLAAKKIIRYIHGTLQYGILF 431
>IMGA|Medtr7g025490.1 Reverse transcriptase, RNA-dependent DNA
polymerase chr07_pseudomolecule_IMGAG_V3 6252058-6249983
H EGN_Mt090430 20090702
Length = 509
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 89/202 (44%), Gaps = 41/202 (20%)
Query: 75 LYGLKQAPRAWYVRIDSYLIQXGFRRSDNEATLYVENLKDGEKLILSLYVNDMLVIGSVF 134
LYGLKQA R W+ ++ S L+ GF V+ D LI
Sbjct: 241 LYGLKQASRRWFEKLISLLLTIGF----------VQASADHSFLI--------------- 275
Query: 135 QLLNNFKKEMQQEFEMSYLGLMNYFLGMEFDQMEQGIFLTQRKYAWDVLKKFQLEQDKSV 194
+ S+ L+ Y +GI L QRKY D+L L KSV
Sbjct: 276 -----------RASPTSFTALLIYVA-----HSSKGISLCQRKYCLDLLSDAGLTTCKSV 319
Query: 195 STPLVHNEKLTSNDGEDKVDSNVYRSLIGSLLYLTSTRPDLMFSASLLSRFMHLPSQAHL 254
STPL + L +DG D YR LIG LLYLT+TRPD+ F+ LS+FM PS H
Sbjct: 320 STPLDYACLLHIDDGPPFDDVLAYRCLIGCLLYLTTTRPDISFATQQLSQFMAKPSVNHH 379
Query: 255 NAARIVLRYIKGTIDFGILLER 276
A VLRY++ G+ R
Sbjct: 380 RTALCVLRYLQVCPGRGLFFPR 401
>IMGA|Medtr4g045170.1 hypothetical protein
chr04_pseudomolecule_IMGAG_V3 10725937-10725201 H
EGN_Mt090430 20090702
Length = 197
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 97/178 (54%), Gaps = 11/178 (6%)
Query: 122 LYVNDMLVIGSVFQL--LNNFKKEMQQEFEMSYLGLMNYFLGMEFDQMEQGIFLTQRKYA 179
LY++ + + +L ++ F+K+M ++FEM+ LG ++YFLG+EF + + + + QR+YA
Sbjct: 6 LYMSKRITTKAAVKLAHISEFRKDMMRQFEMTDLGHISYFLGIEFHRRSRDLLMHQRRYA 65
Query: 180 WDVLKKFQLEQDKSVSTPLVHNEKLTSNDGEDKVDSNVYRSLIGSLLYLTST-RPDLMFS 238
+LKKF +E TP +L+ N+ E VD Y LIGS +++ T + D + +
Sbjct: 66 IKILKKFDIEYRNHAVTPAKTIFQLSKNNDESDVDPTQYGRLIGSQVFIAVTLKIDNIST 125
Query: 239 ASLLSRFMHLPSQAHLNAARIVLR--YIKGTIDFGIL-LERKKMENYKDMLIAIGLEV 293
+L + AH + I +R Y++ + G L LE K EN ++ G+++
Sbjct: 126 INLAKNPI-----AHGRSKHIEMRFHYLREQVSKGKLKLEHSKSENQIADVLTKGVKI 178
>IMGA|Medtr3g101210.1 Reverse transcriptase, RNA-dependent DNA
polymerase chr03_pseudomolecule_IMGAG_V3
24473881-24473486 H EGN_Mt090430 20090702
Length = 131
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 68/129 (52%), Gaps = 6/129 (4%)
Query: 162 MEFDQMEQGIFLTQRKYAWDVLKKFQLEQDKSVSTPLVHNEKLTSNDGEDKVDSNVYRSL 221
ME +G+ L Q YA ++LKKF + S T N + ++ VD ++R L
Sbjct: 1 MEILINSKGLILHQTDYASEILKKFNMLDCNSTITHADANIIYEVKEEDEGVDPTMFRRL 60
Query: 222 IGSLLYLTSTRPDLMFSASLLSRFMHLPSQAHLNAARIVLRYIKGTIDFGILL------E 275
IGSL YL +RP + + ++SRFM P + + +A+ +LRYI T+ +GIL E
Sbjct: 61 IGSLRYLCQSRPGISYLVGIVSRFMSNPLKTNFLSAKKILRYINSTLQYGILFLVVQATE 120
Query: 276 RKKMENYKD 284
+ ME Y D
Sbjct: 121 QLDMEGYSD 129
>IMGA|Medtr3g110550.1 Reverse transcriptase, RNA-dependent DNA
polymerase chr03_pseudomolecule_IMGAG_V3
27872933-27871392 E EGN_Mt090430 20090702
Length = 256
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 77/154 (50%), Gaps = 24/154 (15%)
Query: 122 LYVNDMLVIGSVFQLLNNFKKEMQQEFEMSYLGLMNYFLGMEFDQMEQG-IFLTQRKYAW 180
+YV DM+V G+ LL + F + LG + YFLG+E G + +TQ KY
Sbjct: 3 VYVGDMIVTGNNTPLLQQLVSHLNSAFSLKDLGALKYFLGIEVKPQSNGSLLITQSKYVR 62
Query: 181 DVLKKFQLEQDKSVSTPLVHNEKLTSNDGEDKVDSNVYRSLIGSLLYLTSTRPDLMFSAS 240
D+L K +++ KS+ +P++ + KL+ + D + RS++ +L Y A+
Sbjct: 63 DLLAKTDMQEAKSLPSPMISDLKLSKDGSTPFSDPTLCRSIVRALQY-----------AN 111
Query: 241 LLSRFMHLPSQAHLNAARIVLRYIKGTIDFGILL 274
L+ + VLR++KGT+ +G+L+
Sbjct: 112 LIGPLSN------------VLRHLKGTLSWGLLV 133
>IMGA|Medtr5g086750.1 Reverse transcriptase, RNA-dependent DNA
polymerase chr05_pseudomolecule_IMGAG_V3
33354025-33354392 H EGN_Mt090430 20090702
Length = 108
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 64/102 (62%), Gaps = 1/102 (0%)
Query: 72 RRPLYGLKQAPRAWYVRIDSYLIQXGFRRSDNEATLYVENLKDGEKLILSLYVNDMLVIG 131
R+ LYGLKQA R WY ++ LI+ GF+ S + +L+ + ++ + + +YV+D+++ G
Sbjct: 6 RKSLYGLKQASRNWYSKLSQALIEYGFQESHADHSLFTYS-RESIFMAVLIYVDDLVIAG 64
Query: 132 SVFQLLNNFKKEMQQEFEMSYLGLMNYFLGMEFDQMEQGIFL 173
+ + NFK+ ++Q F M LG + YFLG+E + G+F+
Sbjct: 65 NDTDTITNFKQYLKQCFHMKDLGPLKYFLGLELARGANGLFM 106
>IMGA|Medtr5g099250.1 Reverse transcriptase, RNA-dependent DNA
polymerase chr05_pseudomolecule_IMGAG_V3
39665230-39664877 H EGN_Mt090430 20090702
Length = 117
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 63/117 (53%)
Query: 127 MLVIGSVFQLLNNFKKEMQQEFEMSYLGLMNYFLGMEFDQMEQGIFLTQRKYAWDVLKKF 186
M++ G + K+ + FEM L ++YFLG+E +FL+Q KYA D++ +
Sbjct: 1 MIISGDDSIGIEELKQFLCHHFEMKDLEPLSYFLGLEALSSNDDLFLSQAKYASDLVSQA 60
Query: 187 QLEQDKSVSTPLVHNEKLTSNDGEDKVDSNVYRSLIGSLLYLTSTRPDLMFSASLLS 243
L K T L N + T DG D+ +Y +GSL+YLT+TRP++ + L+S
Sbjct: 61 GLTDCKIEYTRLEPNIQFTPQDGTLLDDATLYWHFVGSLIYLTNTRPNISYFVHLVS 117
>IMGA|Medtr8g081950.1 lectin receptor kinase, related
chr08_pseudomolecule_IMGAG_V3 16974207-16974491 H
EGN_Mt090430 20090702
Length = 94
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%)
Query: 99 RRSDNEATLYVENLKDGEKLILSLYVNDMLVIGSVFQLLNNFKKEMQQEFEMSYLGLMNY 158
+ D+E +YV K +IL LYVND L+ S +N FK ++ +EFEM LG ++Y
Sbjct: 7 NKCDSEHGMYVIKDKSKGVIILYLYVNDFLITCSNGSYINEFKNDLMKEFEMVDLGHISY 66
Query: 159 FLGMEFDQMEQGIFLTQRKYAWDVLKKF 186
FL MEF + + ++ YA ++LK+F
Sbjct: 67 FLRMEFQRTSRASNSSKEIYASEILKRF 94
>IMGA|Medtr1g102700.1 hypothetical protein
chr01_pseudomolecule_IMGAG_V3 21129202-21129726 H
EGN_Mt090430 20090702
Length = 135
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 47/86 (54%)
Query: 196 TPLVHNEKLTSNDGEDKVDSNVYRSLIGSLLYLTSTRPDLMFSASLLSRFMHLPSQAHLN 255
T +V + L + ++ VD +R LIG L YL +TRPDL S LLS+FM +H+
Sbjct: 9 TQVVTSLSLINEQRKENVDFTQFRMLIGCLRYLCNTRPDLALSIGLLSQFMQNLGVSHMI 68
Query: 256 AARIVLRYIKGTIDFGILLERKKMEN 281
A + +L YIKG ++ IL N
Sbjct: 69 AVKRMLIYIKGKVEHAILFSNNDESN 94
>IMGA|Medtr5g028800.1 Reverse transcriptase, RNA-dependent DNA
polymerase chr05_pseudomolecule_IMGAG_V3
11924241-11920624 H EGN_Mt090430 20090702
Length = 92
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 150 MSYLGLMNYFLGMEFDQMEQGIFLTQRKYAWDVLKKFQLEQDKSVSTPLVHNEKLTSNDG 209
MS LG ++YFL MEF E+G+ L Q+KYA +LKKF + D +++ + L+ +
Sbjct: 1 MSDLGNLSYFLRMEFVNTEKGVILHQKKYAKYILKKFGMSND-NLAISRLETGDLSKDTN 59
Query: 210 EDKVDSNVYRSL-IGSLLYL 228
++ ++ ++ + IGSL Y+
Sbjct: 60 DELTNATTHKQINIGSLRYM 79