Jatropha Genome Database
- JcCA0304341.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0304341.10 - phase: 2 /partial
(269 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr2g121640.1 WD40-like chr02_pseudomolecule_IMGAG_V3 289... 534 e-152
IMGA|AC235757_45.1 Tyrosine protein kinase, active site; WD40-li... 447 e-126
IMGA|Medtr1g059920.1 Serine/threonine protein phosphatase 2A 55 ... 447 e-126
IMGA|AC235757_42.3 WD40-like; AC235757.1 143728-153003 E EGN_Mt0... 81 4e-16
IMGA|AC235757_42.1 WD40-like; AC235757.1 143728-153003 E EGN_Mt0... 81 4e-16
IMGA|AC235757_42.2 WD40-like; AC235757.1 143728-153003 E EGN_Mt0... 81 4e-16
>IMGA|Medtr2g121640.1 WD40-like chr02_pseudomolecule_IMGAG_V3
28903505-28910946 E EGN_Mt090430 20090702
Length = 520
Score = 534 bits (1375), Expect = e-152, Method: Compositional matrix adjust.
Identities = 257/270 (95%), Positives = 264/270 (97%), Gaps = 1/270 (0%)
Query: 1 DGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPNHCNMLAYSSS 60
DGETFISADDLRINLWNLEIS+QSFNIVDVKPANMEDLTEVITSAEFHP HCN LAYSSS
Sbjct: 251 DGETFISADDLRINLWNLEISSQSFNIVDVKPANMEDLTEVITSAEFHPTHCNTLAYSSS 310
Query: 61 RGSIRLIDLRQSALCDSHAKLFEEQEAPGSRSFFTEIIASISDIKFAKDGRHILSRDYMT 120
+GSIRLIDLRQSALCDSHAKLFEEQEAPGSRSFFTEIIASISDIKF KDGR+ILSRDYMT
Sbjct: 311 KGSIRLIDLRQSALCDSHAKLFEEQEAPGSRSFFTEIIASISDIKFGKDGRYILSRDYMT 370
Query: 121 LKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATGSYSNLFR 180
LKLWDINMDSGPVAT+QVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATGSYSNLFR
Sbjct: 371 LKLWDINMDSGPVATYQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATGSYSNLFR 430
Query: 181 VFGCAPGSTEETTLEASKNPMRRQVQTPSRPSRSL-SSITRVVRRGAESPGVDANGNSFD 239
VFGCAPGSTE TTLEASKNPMRRQV TPSRPSRSL +SITRVVRRGAE+PGVDANGNSFD
Sbjct: 431 VFGCAPGSTEATTLEASKNPMRRQVPTPSRPSRSLGNSITRVVRRGAENPGVDANGNSFD 490
Query: 240 FTTKLLHLAWHPTENSIACAAANSLYMYYA 269
FTTKLLHLAWHP+ENSIACAAANSLYMYYA
Sbjct: 491 FTTKLLHLAWHPSENSIACAAANSLYMYYA 520
>IMGA|AC235757_45.1 Tyrosine protein kinase, active site; WD40-like
AC235757.1 178369-171369 E EGN_Mt090430 20090702
Length = 818
Score = 447 bits (1151), Expect = e-126, Method: Compositional matrix adjust.
Identities = 212/233 (90%), Positives = 225/233 (96%), Gaps = 1/233 (0%)
Query: 38 LTEVITSAEFHPNHCNMLAYSSSRGSIRLIDLRQSALCDSHAKLFEEQEAPGSRSFFTEI 97
+ EVITSAEFHP HCN LAYSSS+GSIRL+DLRQSALCDSHAKLFEEQEAPGSRSFFTEI
Sbjct: 586 IAEVITSAEFHPTHCNTLAYSSSKGSIRLVDLRQSALCDSHAKLFEEQEAPGSRSFFTEI 645
Query: 98 IASISDIKFAKDGRHILSRDYMTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFD 157
IASISDIKFAKDGR+ILSRDYMTLKLWDINMDSGPVAT++VHE+LRP+LCDLYENDSIFD
Sbjct: 646 IASISDIKFAKDGRYILSRDYMTLKLWDINMDSGPVATYRVHEHLRPRLCDLYENDSIFD 705
Query: 158 KFECCLSGDGLRVATGSYSNLFRVFGCAPGSTEETTLEASKNPMRRQVQTPSRPSRSL-S 216
KFECCLSGDG RV+TGSYSNLFRVFGCAPGSTE TTLEASKNPMRRQV TPSRPSRS+ +
Sbjct: 706 KFECCLSGDGSRVSTGSYSNLFRVFGCAPGSTEATTLEASKNPMRRQVPTPSRPSRSIGN 765
Query: 217 SITRVVRRGAESPGVDANGNSFDFTTKLLHLAWHPTENSIACAAANSLYMYYA 269
SITRVVRRGAE+ GVDANGNSFDFTTKLLHLAWHP+ENSIACAAANSLYMYYA
Sbjct: 766 SITRVVRRGAENTGVDANGNSFDFTTKLLHLAWHPSENSIACAAANSLYMYYA 818
>IMGA|Medtr1g059920.1 Serine/threonine protein phosphatase 2A 55 kDa
regulatory subunit Bbeta isoform, putative
chr01_pseudomolecule_IMGAG_V3 11800230-11798728 E
EGN_Mt090430 20090702
Length = 471
Score = 447 bits (1150), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/272 (83%), Positives = 239/272 (87%), Gaps = 6/272 (2%)
Query: 1 DGETFISADDLRINLWNLEISNQSFNIVDVKPANMED-LTEVITSAEFHPNHCNMLAYSS 59
DGETFISAD LRINLWNLEIS SFNIVDVKPANM+D LTEVITSAEFHP HCN LAYSS
Sbjct: 190 DGETFISADALRINLWNLEISKPSFNIVDVKPANMDDDLTEVITSAEFHPTHCNTLAYSS 249
Query: 60 SRGSIRLIDLRQSALCDSHAKLFEEQEAPGSRSFFTEIIASISDIKFAKDGRHILSRDYM 119
S+GSIRLIDLRQSALCDSHAKLFE AP S S F EIIASISDIKF KDGR+ILSRDYM
Sbjct: 250 SKGSIRLIDLRQSALCDSHAKLFE---APRSSSLFKEIIASISDIKFGKDGRYILSRDYM 306
Query: 120 TLKLWDINMDSGPVATFQVHEYLRPKLCD-LYENDSIFDKFECCLSGDGLRVATGSYSNL 178
TLKLWDINMDSGPVAT+QVH+YL+ KL + LYEN+SI DKFECC SGDGLRVATGSY+NL
Sbjct: 307 TLKLWDINMDSGPVATYQVHKYLKSKLKEYLYENESILDKFECCQSGDGLRVATGSYNNL 366
Query: 179 FRVFGCAPGSTEETTLEASKNPMRRQVQTPSRPSRSL-SSITRVVRRGAESPGVDANGNS 237
FRVFGCAPGSTE TTLEA K P RQV PSR SRSL +SITRVV +GAE+ VDANGNS
Sbjct: 367 FRVFGCAPGSTEATTLEAGKIPTGRQVPIPSRLSRSLGNSITRVVGQGAENNRVDANGNS 426
Query: 238 FDFTTKLLHLAWHPTENSIACAAANSLYMYYA 269
FDFT KLLHLAWHP+ENSIACAAAN LYMYYA
Sbjct: 427 FDFTKKLLHLAWHPSENSIACAAANRLYMYYA 458
>IMGA|AC235757_42.3 WD40-like; AC235757.1 143728-153003 E
EGN_Mt090430 20090702
Length = 689
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/39 (97%), Positives = 39/39 (100%)
Query: 1 DGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLT 39
DGETFISADDLRINLWNLEIS+QSFNIVDVKPANMEDLT
Sbjct: 246 DGETFISADDLRINLWNLEISSQSFNIVDVKPANMEDLT 284
>IMGA|AC235757_42.1 WD40-like; AC235757.1 143728-153003 E
EGN_Mt090430 20090702
Length = 690
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/39 (97%), Positives = 39/39 (100%)
Query: 1 DGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLT 39
DGETFISADDLRINLWNLEIS+QSFNIVDVKPANMEDLT
Sbjct: 247 DGETFISADDLRINLWNLEISSQSFNIVDVKPANMEDLT 285
>IMGA|AC235757_42.2 WD40-like; AC235757.1 143728-153003 E
EGN_Mt090430 20090702
Length = 688
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/39 (97%), Positives = 39/39 (100%)
Query: 1 DGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLT 39
DGETFISADDLRINLWNLEIS+QSFNIVDVKPANMEDLT
Sbjct: 245 DGETFISADDLRINLWNLEISSQSFNIVDVKPANMEDLT 283