Jatropha Genome Database

JcCA0304251.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0304251.20 + phase: 0 
         (163 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr6g013230.1 Cys/Met metabolism pyridoxal-phosphate-depe...    77   3e-15
IMGA|Medtr7g010560.1 Cystathionine beta-lyase, related chr07_pse...    74   2e-14
IMGA|Medtr3g109370.1 Cys/Met metabolism pyridoxal-phosphate-depe...    53   6e-08
IMGA|AC148471_23.1 O-acetylhomoserine/O-acetylserine sulfhydryla...    49   9e-07

>IMGA|Medtr6g013230.1 Cys/Met metabolism
           pyridoxal-phosphate-dependent enzymes; ;
           chr06_pseudomolecule_IMGAG_V3 2746264-2752471 E
           EGN_Mt090430 20090702
          Length = 477

 Score = 77.4 bits (189), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 70/117 (59%), Gaps = 12/117 (10%)

Query: 26  IAKMAHTHSALVLVDNSIMSPVLSQPLELGADIVMHSATKFIAGHSDVMAGVLAVKGQ-- 83
           ++++ H   ALV +D +  +P+  + L LGAD+V++SATK+IAGH DV+AG ++   +  
Sbjct: 254 VSELCHRKGALVCIDGTFSTPINQKALSLGADLVVNSATKYIAGHHDVLAGCISGSEKLI 313

Query: 84  SLARDLYFLQNAEGSGLAPFDCWICLRGIKTMALRVEKQQV-------LILTQPKRT 133
           S  R  +F+    G  L+P   ++ +RG+KT+ LRV+ Q         L+ T PK T
Sbjct: 314 SQVRSFHFIL---GGTLSPNSAYLVIRGMKTLHLRVQHQNSTAMKMAQLLETHPKVT 367


>IMGA|Medtr7g010560.1 Cystathionine beta-lyase, related
           chr07_pseudomolecule_IMGAG_V3 2308691-2313997 F
           EGN_Mt090430 20090702
          Length = 535

 Score = 74.3 bits (181), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 62/98 (63%), Gaps = 1/98 (1%)

Query: 26  IAKMAHTHSALVLVDNSIMSPVLSQPLELGADIVMHSATKFIAGHSDVMAGVLAVKGQSL 85
           ++++ H + AL+++D +  +P+  + L LGAD+VMHS TK+I GH DV+ G ++     L
Sbjct: 312 VSELCHKNGALLVIDGTFATPLNQKALALGADLVMHSCTKYIGGHHDVLGGCIS-GSLKL 370

Query: 86  ARDLYFLQNAEGSGLAPFDCWICLRGIKTMALRVEKQQ 123
             ++  L +  G  L P   ++ +RG+KT+ LRV++Q 
Sbjct: 371 ISEIRILHHILGGALNPNAAYLFIRGMKTLHLRVQQQN 408


>IMGA|Medtr3g109370.1 Cys/Met metabolism
           pyridoxal-phosphate-dependent enzymes; ;
           chr03_pseudomolecule_IMGAG_V3 27390951-27393346 E
           EGN_Mt090430 20090702
          Length = 443

 Score = 53.1 bits (126), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 24/53 (45%), Positives = 38/53 (71%), Gaps = 1/53 (1%)

Query: 26  IAKMAHTHSALVLVDNSIMSPVLSQPLELGADIVMHSATKFIAGHSDVMAGVL 78
           +A++AH     V+VDN+  +P+L  P  LGAD+V+HS +KFI+G  D++AG +
Sbjct: 209 LARIAHKKGVTVVVDNTF-APMLLSPARLGADVVVHSISKFISGGGDIIAGAV 260


>IMGA|AC148471_23.1 O-acetylhomoserine/O-acetylserine sulfhydrylase;
           AC148471.15 39854-40783 H EGN_Mt090430 20090702
          Length = 309

 Score = 49.3 bits (116), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 33/44 (75%)

Query: 24  NAIAKMAHTHSALVLVDNSIMSPVLSQPLELGADIVMHSATKFI 67
           +AI+K+AH H   ++VD++  +P L+QPL  GAD+V+HS TK+ 
Sbjct: 165 DAISKVAHGHGLPLVVDSTFSTPYLTQPLAHGADVVVHSLTKWF 208