Jatropha Genome Database

JcCA0302361.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0302361.30 - phase: 0 
         (198 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g099290.1 HSP20-like chaperone chr01_pseudomolecule_I...   204   3e-53
IMGA|Medtr2g007400.1 HSP20-like chaperone chr02_pseudomolecule_I...   130   4e-31
IMGA|Medtr2g095360.1 HSP20-like chaperone chr02_pseudomolecule_I...   125   1e-29

>IMGA|Medtr1g099290.1 HSP20-like chaperone
           chr01_pseudomolecule_IMGAG_V3 20268160-20264984 H
           EGN_Mt090430 20090702
          Length = 448

 Score =  204 bits (518), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 102/181 (56%), Positives = 132/181 (72%), Gaps = 11/181 (6%)

Query: 19  AVPPLNSVPYIGSPGMVVDDTPLPAEDDAQPVEKVG-PSMVFLPPSTTQKERDNVLASAK 77
           AV P++ VP+ G  G       L  E D+    KVG P+ +FLP   T+KE  N++A+  
Sbjct: 248 AVTPISCVPFNGGMG-------LDGEGDSV---KVGAPAALFLPSRPTKKEWSNIVAATN 297

Query: 78  GAVALSGSAAMGMVGPALGLMDIGESDDAYLFRVSLPGVARDEKEFSCDIEPDGTILIKG 137
              AL+GSAAMG +GP +GL+DIGE +D+YLFR+SLPGV RD+KEFSC+++ DG + I+G
Sbjct: 298 SGFALTGSAAMGQIGPIMGLVDIGECEDSYLFRMSLPGVKRDDKEFSCEVDTDGKVFIQG 357

Query: 138 VTTTGEKTVCKNSQIFRMQTQNLCPPGHFSITFQLPGPVNHKQFRGHFGNDGMLEGIVKK 197
           +TTTGEKTV   +Q+F MQTQNLCP G FSITFQLPGPV+  QF G+FG DG+LEGIV K
Sbjct: 358 ITTTGEKTVSMRTQVFEMQTQNLCPAGQFSITFQLPGPVDPHQFSGNFGTDGILEGIVVK 417

Query: 198 K 198
           +
Sbjct: 418 R 418


>IMGA|Medtr2g007400.1 HSP20-like chaperone
           chr02_pseudomolecule_IMGAG_V3 1112314-1113820 H
           EGN_Mt090430 20090702
          Length = 426

 Score =  130 bits (328), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 60/119 (50%), Positives = 90/119 (75%), Gaps = 1/119 (0%)

Query: 79  AVALSGSAAMGMVGPALGLMDIGESDDAYLFRVSLPGVARDEKEFSCDIEPDGTILIKGV 138
           ++ L+G+A  G++GP++G++DIG S  AYLFRVSLPGV R+  +FSCDIE DG + I+G+
Sbjct: 308 SIVLTGTANRGLLGPSVGVVDIGISKVAYLFRVSLPGVKREYNQFSCDIESDGKVEIRGL 367

Query: 139 TTTGEKTVCKNSQIFRMQTQNLCPPGHFSITFQLPGPVNHKQFRGHFGNDGMLEGIVKK 197
             +G +T+   S++F+M+TQ LC PG F+I+F LPGPV+ + F  +F +DG+ EG+V K
Sbjct: 368 -LSGIRTIATQSRVFQMKTQQLCSPGPFTISFSLPGPVDPRLFAPNFRDDGIFEGVVIK 425


>IMGA|Medtr2g095360.1 HSP20-like chaperone
           chr02_pseudomolecule_IMGAG_V3 21751154-21754124 E
           EGN_Mt090430 20090702
          Length = 515

 Score =  125 bits (315), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 62/142 (43%), Positives = 100/142 (70%), Gaps = 6/142 (4%)

Query: 54  GPSMVFLPPSTTQKERDNVLASAKGAVALSGSAAMGMVGPALGLMDIGESDDAYLFRVSL 113
           GPS++   P  +  + D+ + S   +V L+G+A  G++GP++G++DIG S+ AYLFRV +
Sbjct: 315 GPSLM---PLLSIPDIDDCVQSY--SVVLTGTANRGLLGPSVGVVDIGISEVAYLFRVLV 369

Query: 114 PGVARDEKEFSCDIEPDGTILIKGVTTTGEKTVCKNSQIFRMQTQNLCPPGHFSITFQLP 173
           PGV R+   FSCDIE DG + I+G+ + G +T+ + S++F+M+T  LC PG F+I+F LP
Sbjct: 370 PGVKREHNRFSCDIESDGKVEIRGLLSGG-RTIARQSRLFQMKTHQLCSPGPFTISFSLP 428

Query: 174 GPVNHKQFRGHFGNDGMLEGIV 195
           GPV+ + F  +F +DG+ EG++
Sbjct: 429 GPVDPRLFAPNFRSDGIFEGVL 450