Jatropha Genome Database

JcCA0302331.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0302331.10 + phase: 2 /partial
         (356 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g087420.1 Glutamine synthetase type I chr03_pseudomol...   620   e-178
IMGA|Medtr6g080780.1 Glutamine synthetase type I chr06_pseudomol...   614   e-176
IMGA|Medtr5g085750.1 Glutamine synthetase type I chr05_pseudomol...   592   e-170
IMGA|Medtr2g026390.1 Glutamine synthetase type I chr02_pseudomol...   566   e-162
IMGA|Medtr2g026360.1 Glutamine synthetase type I chr02_pseudomol...   546   e-156
IMGA|Medtr8g073890.1 Glutamine synthetase leaf isozyme, chloropl...   117   1e-26
IMGA|Medtr2g026370.1 Glutamine synthetase leaf isozyme, chloropl...    94   1e-19

>IMGA|Medtr3g087420.1 Glutamine synthetase type I
           chr03_pseudomolecule_IMGAG_V3 20771238-20767400 F
           EGN_Mt090430 20090702
          Length = 356

 Score =  620 bits (1600), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 298/343 (86%), Positives = 318/343 (92%)

Query: 14  ETTDKIIAEYIWIGGSGMDLRSKARTLSGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILY 73
           ETT+KIIAEYIWIGGSG+DLRSKARTL GPV+DPS+LPKWNYDGSSTGQAPGEDSEVI+Y
Sbjct: 14  ETTEKIIAEYIWIGGSGLDLRSKARTLPGPVTDPSQLPKWNYDGSSTGQAPGEDSEVIIY 73

Query: 74  PQAIFRDPFRRGNNILVICDAYTPAGEPIPTNKRHAAAKIFSHPDVVAEVPWYGIEQEYT 133
           PQAIF+DPFRRGNNILV+CDAYTPAGEPIPTNKRHAAAK+FSHPDVVAEVPWYGIEQEYT
Sbjct: 74  PQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKVFSHPDVVAEVPWYGIEQEYT 133

Query: 134 LLQKDIKXXXXXXXXXXXXXXXXYYCGVGADKSFGRDIVDAHYKACLYAGVNISGINGEV 193
           LLQKDI                 YYCG GADK+FGRDIVD+HYKACLYAG+NISGINGEV
Sbjct: 134 LLQKDINWPLGWPVGGFPGPQGPYYCGAGADKAFGRDIVDSHYKACLYAGINISGINGEV 193

Query: 194 MPGQWEFQVGPAVGISAGDELWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHTNYS 253
           MPGQWEFQVGP+VGISAGDE+WVARYILERITEIA VVLSFDPKPI+GDWNGAGAHTNYS
Sbjct: 194 MPGQWEFQVGPSVGISAGDEIWVARYILERITEIADVVLSFDPKPIKGDWNGAGAHTNYS 253

Query: 254 TKSMRNDGGYEVIKKAIEKLGLRHKKHIAAYGEGNERRLTGRHETADINTFKWGVADRGA 313
           TKSMR DGGYEVI KAIEKLG +HK+HIAAYGEGNERRLTGRHETADINTF WGVA+RGA
Sbjct: 254 TKSMREDGGYEVILKAIEKLGKKHKEHIAAYGEGNERRLTGRHETADINTFLWGVANRGA 313

Query: 314 SVRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 356
           S+RVGRDTEK GKGYFEDRRP+SNMDPYVVTSMIA+TTILWKP
Sbjct: 314 SIRVGRDTEKAGKGYFEDRRPSSNMDPYVVTSMIADTTILWKP 356


>IMGA|Medtr6g080780.1 Glutamine synthetase type I
           chr06_pseudomolecule_IMGAG_V3 16289543-16295966 E
           EGN_Mt090430 20090702
          Length = 356

 Score =  614 bits (1583), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 292/343 (85%), Positives = 316/343 (92%)

Query: 14  ETTDKIIAEYIWIGGSGMDLRSKARTLSGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILY 73
           E+++KIIAEYIW+GGSGMDLRSKARTL GPVSDPSKLPKWNYDGSST QAPG+DSEVILY
Sbjct: 14  ESSEKIIAEYIWVGGSGMDLRSKARTLPGPVSDPSKLPKWNYDGSSTNQAPGQDSEVILY 73

Query: 74  PQAIFRDPFRRGNNILVICDAYTPAGEPIPTNKRHAAAKIFSHPDVVAEVPWYGIEQEYT 133
           PQAIF+DPFR+GNNILVICD YTPAGEP+PTNKR+ AAKIFSHPDV AEVPWYGIEQEYT
Sbjct: 74  PQAIFKDPFRQGNNILVICDVYTPAGEPLPTNKRYNAAKIFSHPDVAAEVPWYGIEQEYT 133

Query: 134 LLQKDIKXXXXXXXXXXXXXXXXYYCGVGADKSFGRDIVDAHYKACLYAGVNISGINGEV 193
           LLQKD                  YYCG+GADK++GRDIVDAHYKACLYAG+NISGINGEV
Sbjct: 134 LLQKDTNWPLGWPIGGYPGPQGPYYCGIGADKAYGRDIVDAHYKACLYAGINISGINGEV 193

Query: 194 MPGQWEFQVGPAVGISAGDELWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHTNYS 253
           MPGQWEFQVGP+VGISAGDE+W ARYILERITEIAGVV+SFDPKPI GDWNGAGAHTNYS
Sbjct: 194 MPGQWEFQVGPSVGISAGDEIWAARYILERITEIAGVVVSFDPKPIPGDWNGAGAHTNYS 253

Query: 254 TKSMRNDGGYEVIKKAIEKLGLRHKKHIAAYGEGNERRLTGRHETADINTFKWGVADRGA 313
           TKSMR +GGYE+IKKAIEKLGLRHK+HIAAYGEGNERRLTG+HETADINTF WGVA+RGA
Sbjct: 254 TKSMRENGGYEIIKKAIEKLGLRHKEHIAAYGEGNERRLTGKHETADINTFSWGVANRGA 313

Query: 314 SVRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 356
           SVRVGRDTEK+GKGYFEDRRP+SNMDPYVVTSMIAETT+LWKP
Sbjct: 314 SVRVGRDTEKDGKGYFEDRRPSSNMDPYVVTSMIAETTLLWKP 356


>IMGA|Medtr5g085750.1 Glutamine synthetase type I
           chr05_pseudomolecule_IMGAG_V3 32777399-32773850 E
           EGN_Mt090430 20090702
          Length = 357

 Score =  592 bits (1526), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 283/343 (82%), Positives = 306/343 (89%)

Query: 14  ETTDKIIAEYIWIGGSGMDLRSKARTLSGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILY 73
           ETT+K+IAEYIW+GGSGMD+RSK RTL GPV DPSKLPKWNYDGSSTGQA G+DSEVIL+
Sbjct: 15  ETTEKVIAEYIWVGGSGMDMRSKGRTLPGPVEDPSKLPKWNYDGSSTGQASGDDSEVILH 74

Query: 74  PQAIFRDPFRRGNNILVICDAYTPAGEPIPTNKRHAAAKIFSHPDVVAEVPWYGIEQEYT 133
           PQAIF+DPFRRG NILV+CDAYT AGEPIPTNKRHAAAKIFSHPDVVAE PWYGIEQEYT
Sbjct: 75  PQAIFKDPFRRGKNILVMCDAYTAAGEPIPTNKRHAAAKIFSHPDVVAEEPWYGIEQEYT 134

Query: 134 LLQKDIKXXXXXXXXXXXXXXXXYYCGVGADKSFGRDIVDAHYKACLYAGVNISGINGEV 193
           LLQKD                  YYCGVGA+K+ GRDIVDAHYKACLYAG+NISG+NGEV
Sbjct: 135 LLQKDAHWPLGWPKGGFPGPQGPYYCGVGAEKALGRDIVDAHYKACLYAGINISGVNGEV 194

Query: 194 MPGQWEFQVGPAVGISAGDELWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHTNYS 253
           MP QWEFQVGP VGISAGDE+WVARY+LER+ E+AG VLSFDPKPI+GDWNGAGAH NYS
Sbjct: 195 MPSQWEFQVGPVVGISAGDEVWVARYLLERVCELAGAVLSFDPKPIKGDWNGAGAHVNYS 254

Query: 254 TKSMRNDGGYEVIKKAIEKLGLRHKKHIAAYGEGNERRLTGRHETADINTFKWGVADRGA 313
           TK+MRN+GGYEVIKKAI  L  RHK+HIAAYGEGNERRLTGRHETADINTFKWGVA+RGA
Sbjct: 255 TKTMRNNGGYEVIKKAIGNLEKRHKEHIAAYGEGNERRLTGRHETADINTFKWGVANRGA 314

Query: 314 SVRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 356
           SVRVGR+TEK GKGYFEDRRP SNM+PYVVTSMIAETTILWKP
Sbjct: 315 SVRVGRETEKAGKGYFEDRRPGSNMNPYVVTSMIAETTILWKP 357


>IMGA|Medtr2g026390.1 Glutamine synthetase type I
           chr02_pseudomolecule_IMGAG_V3 7188718-7183850 E
           EGN_Mt090430 20090702
          Length = 428

 Score =  566 bits (1460), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 266/341 (78%), Positives = 294/341 (86%)

Query: 16  TDKIIAEYIWIGGSGMDLRSKARTLSGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQ 75
           TD IIAEYIWIGG+G+D+RSK+RT+S PV  PS+LPKWNYDGSSTGQAPGEDSEVILYPQ
Sbjct: 72  TDSIIAEYIWIGGTGIDVRSKSRTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQ 131

Query: 76  AIFRDPFRRGNNILVICDAYTPAGEPIPTNKRHAAAKIFSHPDVVAEVPWYGIEQEYTLL 135
           AIF+DPFR GNNILVICDAYTP GEPIPTNKRH AA+IFS+P V AE+PWYGIEQEYTLL
Sbjct: 132 AIFKDPFRGGNNILVICDAYTPQGEPIPTNKRHKAAEIFSNPKVEAEIPWYGIEQEYTLL 191

Query: 136 QKDIKXXXXXXXXXXXXXXXXYYCGVGADKSFGRDIVDAHYKACLYAGVNISGINGEVMP 195
           Q D+K                YYC  GADKSFGRDI DAHYKACLYAG+NISG NGEVMP
Sbjct: 192 QTDVKWPLGWPVGGYPGPQGPYYCAAGADKSFGRDISDAHYKACLYAGINISGTNGEVMP 251

Query: 196 GQWEFQVGPAVGISAGDELWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHTNYSTK 255
           GQWE+QVGP+VGI AGD +W +RYILERITE AGVVL+ DPKPI+GDWNGAG HTNYSTK
Sbjct: 252 GQWEYQVGPSVGIEAGDHIWASRYILERITEQAGVVLTLDPKPIEGDWNGAGCHTNYSTK 311

Query: 256 SMRNDGGYEVIKKAIEKLGLRHKKHIAAYGEGNERRLTGRHETADINTFKWGVADRGASV 315
           SMR DGG+EVIKKAI  L LRHK HI AYGEGNERRLTG+HETA INTF WGVA+RG S+
Sbjct: 312 SMREDGGFEVIKKAILNLSLRHKIHIEAYGEGNERRLTGKHETASINTFSWGVANRGCSI 371

Query: 316 RVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 356
           RVGRDTEK GKGY EDRRPASNMDPYVVT+++AE+T+LW+P
Sbjct: 372 RVGRDTEKNGKGYLEDRRPASNMDPYVVTALLAESTLLWEP 412


>IMGA|Medtr2g026360.1 Glutamine synthetase type I
           chr02_pseudomolecule_IMGAG_V3 7176068-7172878 E
           EGN_Mt090430 20090702
          Length = 428

 Score =  546 bits (1406), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 254/341 (74%), Positives = 288/341 (84%)

Query: 16  TDKIIAEYIWIGGSGMDLRSKARTLSGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQ 75
           TD IIAEYIWIGG+G+D+RSK+RT+S PV  PS+LPKWNYDGSSTGQAPGED+EVILYPQ
Sbjct: 72  TDSIIAEYIWIGGTGIDVRSKSRTISKPVEHPSELPKWNYDGSSTGQAPGEDTEVILYPQ 131

Query: 76  AIFRDPFRRGNNILVICDAYTPAGEPIPTNKRHAAAKIFSHPDVVAEVPWYGIEQEYTLL 135
           AIF+DPFR GNNILVICDAYT  GEPIPTNKR+ AA+IF +P V AE+PW+GIEQEYTLL
Sbjct: 132 AIFKDPFRGGNNILVICDAYTTQGEPIPTNKRYKAAQIFRNPKVEAEIPWFGIEQEYTLL 191

Query: 136 QKDIKXXXXXXXXXXXXXXXXYYCGVGADKSFGRDIVDAHYKACLYAGVNISGINGEVMP 195
           Q ++K                YYCG GADKSFGRDI DAHYKACLYAG+NISG N EVMP
Sbjct: 192 QTNVKWPLGWPVGGYPGPQGPYYCGAGADKSFGRDISDAHYKACLYAGINISGTNAEVMP 251

Query: 196 GQWEFQVGPAVGISAGDELWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHTNYSTK 255
           GQWE+QVGP+VG  A D +W +RYILERITE AGVVLS DPKPI+GDWNGAG HTNYSTK
Sbjct: 252 GQWEYQVGPSVGTEAADHIWASRYILERITEQAGVVLSLDPKPIEGDWNGAGCHTNYSTK 311

Query: 256 SMRNDGGYEVIKKAIEKLGLRHKKHIAAYGEGNERRLTGRHETADINTFKWGVADRGASV 315
           SMR DGG+EVIKKAI  L LRHK H+ AYGEGNERRLTG+HETA I+TF WG+  RG S+
Sbjct: 312 SMREDGGFEVIKKAILNLSLRHKVHMEAYGEGNERRLTGKHETASIDTFSWGIGKRGCSI 371

Query: 316 RVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 356
           RVGR+TEK GKGY EDRRPASNMDPYVVT+++AE+T+LW+P
Sbjct: 372 RVGRETEKNGKGYLEDRRPASNMDPYVVTALLAESTLLWEP 412


>IMGA|Medtr8g073890.1 Glutamine synthetase leaf isozyme, chloroplast
           precursor, putative chr08_pseudomolecule_IMGAG_V3
           14577626-14581937 E EGN_Mt090430 20090702
          Length = 152

 Score =  117 bits (292), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 64/106 (60%), Positives = 73/106 (68%), Gaps = 13/106 (12%)

Query: 251 NYSTKSMRNDGGYEVIKKAIEKLGLRHKKHIAAYGEGNERRLTGRHETADINTFKWGVAD 310
           N  TKSMR DG +EVIKK I K  LRH+ HI AYGEGNE RLTGRHE          VA+
Sbjct: 4   NCITKSMREDGEFEVIKKPILKPSLRHQVHIEAYGEGNETRLTGRHER---------VAN 54

Query: 311 RGASVRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 356
            G S+ V RDTEK GKG     R AS+MDPYVVT+++AE T+LWKP
Sbjct: 55  CGCSICVVRDTEKNGKGG----RAASDMDPYVVTALLAERTVLWKP 96


>IMGA|Medtr2g026370.1 Glutamine synthetase leaf isozyme, chloroplast
           precursor, putative chr02_pseudomolecule_IMGAG_V3
           7180587-7179286 E EGN_Mt090430 20090702
          Length = 114

 Score = 93.6 bits (231), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 58/152 (38%), Positives = 77/152 (50%), Gaps = 53/152 (34%)

Query: 205 AVGISAGDELWVARYILERITEIAGVVL-SFDPKPIQGDWNGAGAHTNYSTKSMRNDGGY 263
           A  +  GD +W +++  +RI + AGVVL + +P+PI+   NGAG   N            
Sbjct: 4   ANSVKDGDHIWASKF--KRIAKQAGVVLLTLNPQPIE---NGAGMSGN------------ 46

Query: 264 EVIKKAIEKLGLRHKKHIAAYGEGNERRLTGRHETADINTFKWGVADRGASVRVGRDTEK 323
                                 EGNER+LT +HET  INTF W              TEK
Sbjct: 47  ---------------------NEGNERKLTVKHETVSINTFSW--------------TEK 71

Query: 324 EGKGYFEDRRPASNMDPYVVTSMIAETTILWK 355
            GKGY EDR   SNMDPYVVT+++AE+T+LW+
Sbjct: 72  NGKGYLEDRPLVSNMDPYVVTTLLAESTLLWE 103