Jatropha Genome Database

JcCA0301931.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0301931.10 + phase: 0 
         (509 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g064800.1 Pyridoxal-dependent decarboxylase; ; chr07_...   690   0.0  
IMGA|Medtr7g117140.1 Pyridoxal-dependent decarboxylase; ; chr07_...   618   e-177
IMGA|Medtr7g117100.1 Pyridoxal-dependent decarboxylase; ; chr07_...   608   e-174

>IMGA|Medtr7g064800.1 Pyridoxal-dependent decarboxylase; ;
           chr07_pseudomolecule_IMGAG_V3 13168638-13170280 E
           EGN_Mt090430 20090702
          Length = 523

 Score =  690 bits (1781), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/489 (65%), Positives = 402/489 (82%), Gaps = 6/489 (1%)

Query: 17  VNPLNADEFRRQGQMIIDFIADYYQNIEKYPVLSQVEPGYLQKRLPHSAPDNPESIETIL 76
           +NPL+  EF++QG M+IDF+ADYY+NI  YPVLSQVEP YL+K LP  AP NPE IETIL
Sbjct: 1   MNPLDTTEFKKQGHMMIDFLADYYENISNYPVLSQVEPNYLKKLLPTFAPSNPEPIETIL 60

Query: 77  QDVRKHILPGITHWQSPNYFAYFAASGSTASFLGEMLSTGFNIVGFNWLSSPAATELESI 136
           +D +K+I+PGITHWQSPNYFAYF +SGSTA FLGEMLSTG N+VGFNW+SSPAATELE++
Sbjct: 61  EDYQKYIIPGITHWQSPNYFAYFPSSGSTAGFLGEMLSTGLNVVGFNWISSPAATELENV 120

Query: 137 VMDWLGQVLQLPSCFLFSGSGGGVIQGTTCEAILCTLIAARDQMLRSIGKEKIGKLVVYA 196
           V+DWLG++L LP  FLF G GGGV+ GTTCE IL TL+ ARD++L  IG E  GKLVVY 
Sbjct: 121 VIDWLGEILNLPKSFLFKGGGGGVLLGTTCEGILGTLVVARDKILSKIGSENAGKLVVYG 180

Query: 197 SDQTHSALQKAAQIAGISLENFRTIKTNKSTFFSMSPDSLRVTIQSDIEKGLIPLFLCAT 256
           SDQTH A+QKAA I GI+ +NFR IKT K   F++ P+SL  TI++D++ GL+P FLC T
Sbjct: 181 SDQTHCAVQKAAHIIGINPKNFRAIKTKKLNSFTLLPESLLSTIENDLKNGLVPCFLCVT 240

Query: 257 IGTTSTTAVDPLRPLCDVAREFNIWIHVDAAYAGNACICPEFQHFLDGLEDANSFSLNAH 316
           +GTTSTTA+DP+R LC+VA+++ IW+H+DAAYAG+ACICPEF++ +DG+EDA+SFSLNAH
Sbjct: 241 VGTTSTTAIDPVRKLCNVAKDYGIWVHIDAAYAGSACICPEFRYLIDGVEDADSFSLNAH 300

Query: 317 KWLLTNLDCCCLWVKDPNALIKSLS-TNPEYLKNKASDSAQVVDYKDWQIALSRRFRSLK 375
           KW LTNLDCCCLW+KDPN+LIK LS TN EYL+N AS+S QVVDYKDWQ+ LSRRFR+LK
Sbjct: 301 KWFLTNLDCCCLWLKDPNSLIKCLSTTNSEYLENSASNSKQVVDYKDWQVTLSRRFRALK 360

Query: 376 LWLVLRSYGVRNLRTFLGRHVEMAKVFEGLVREDKMFEIVVPRNFAMVCFRIVPGAIEMG 435
           +W VLRSYGV NLR FL  HVEMAK FEGLV+ DK FEI+VPR  A+VCFRI+P   ++ 
Sbjct: 361 VWFVLRSYGVENLRNFLRNHVEMAKTFEGLVKMDKRFEIIVPRKLAVVCFRILPYGKKVA 420

Query: 436 KDGV-----QMLPDREILANELNRRLLESINASGCIFMTHGMVGGVYFMRFAVGATLTED 490
              V     +++   +++ANE+NR+LL+SINASG ++MTH +V GV+ +R A+GATLTE+
Sbjct: 421 DGKVTNGEAKLISSEDVVANEINRKLLDSINASGDVYMTHAVVEGVFVIRCAIGATLTEE 480

Query: 491 HHVIMAWKV 499
            HV+ AWKV
Sbjct: 481 LHVVKAWKV 489


>IMGA|Medtr7g117140.1 Pyridoxal-dependent decarboxylase; ;
           chr07_pseudomolecule_IMGAG_V3 27288261-27283149 E
           EGN_Mt090430 20090702
          Length = 506

 Score =  618 bits (1594), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 285/480 (59%), Positives = 367/480 (76%), Gaps = 12/480 (2%)

Query: 20  LNADEFRRQGQMIIDFIADYYQNIEKYPVLSQVEPGYLQKRLPHSAPDNPESIETILQDV 79
           ++A++ R QG M++DFIADYY+ IE +PVLSQV+PGYL K LP SAP +PES++ +L DV
Sbjct: 27  MDAEQLREQGHMMVDFIADYYKTIENFPVLSQVQPGYLGKLLPDSAPTHPESLQHVLNDV 86

Query: 80  RKHILPGITHWQSPNYFAYFAASGSTASFLGEMLSTGFNIVGFNWLSSPAATELESIVMD 139
           ++ ILPG+THWQSPNYFAYF ++ S A FLGEMLS G NIVGF+W++SPAATELE+IV+D
Sbjct: 87  QEKILPGVTHWQSPNYFAYFPSNSSIAGFLGEMLSAGLNIVGFSWITSPAATELETIVLD 146

Query: 140 WLGQVLQLPSCFLFSGSGGGVIQGTTCEAILCTLIAARDQMLRSIGKEKIGKLVVYASDQ 199
           WL + L LP  F  +G GGGVIQGT  EA+L  L+AARD++LR++G+  + KLV YASDQ
Sbjct: 147 WLAKALLLPPDFFSTGLGGGVIQGTASEAVLVVLLAARDKILRTVGRSALPKLVTYASDQ 206

Query: 200 THSALQKAAQIAGISLENFRTIKTNKSTFFSMSPDSLRVTIQSDIEKGLIPLFLCATIGT 259
           THS+LQKA QI G++ E  R +KT+ ST F++S D L   I +DI  GLIP FLCAT+GT
Sbjct: 207 THSSLQKACQIGGLNPELCRLLKTDSSTSFALSSDVLSEAISNDIASGLIPFFLCATVGT 266

Query: 260 TSTTAVDPLRPLCDVAREFNIWIHVDAAYAGNACICPEFQHFLDGLEDANSFSLNAHKWL 319
           TS+TAVDPL  L  VAR  NIW HVDAAYAG+ACICPE++HF+DG+E+A+SF++NAHKW 
Sbjct: 267 TSSTAVDPLPALAKVARTNNIWFHVDAAYAGSACICPEYRHFIDGVEEADSFNMNAHKWF 326

Query: 320 LTNLDCCCLWVKDPNALIKSLSTNPEYLKNKASDSAQVVDYKDWQIALSRRFRSLKLWLV 379
           LTN DC  LWVKD +ALI+SLSTNPEYLKNKAS    V+DYKDWQI L RRFRSLKLW+V
Sbjct: 327 LTNFDCSVLWVKDRSALIQSLSTNPEYLKNKASQGNMVIDYKDWQIPLGRRFRSLKLWMV 386

Query: 380 LRSYGVRNLRTFLGRHVEMAKVFEGLVREDKMFEIVVPRNFAMVCFRIVPGAIEMGKDGV 439
           +R YG+  LRT +  H+ +A  FE LV +D  F++V PR F++VCFR++P          
Sbjct: 387 MRLYGLEGLRTHIRNHIALAAYFEELVGQDTRFKVVAPRTFSLVCFRLLPP--------- 437

Query: 440 QMLPDREILANELNRRLLESINASGCIFMTHGMVGGVYFMRFAVGATLTEDHHVIMAWKV 499
              P+ E   N+LN  LL+++N++G +F+TH ++ G Y +RFAVGA LTE  HV  AW++
Sbjct: 438 ---PNSEDNGNKLNHDLLDAVNSTGNVFITHTVLSGEYILRFAVGAPLTEMRHVSAAWQI 494


>IMGA|Medtr7g117100.1 Pyridoxal-dependent decarboxylase; ;
           chr07_pseudomolecule_IMGAG_V3 27276097-27270341 E
           EGN_Mt090430 20090702
          Length = 532

 Score =  608 bits (1568), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 281/480 (58%), Positives = 366/480 (76%), Gaps = 12/480 (2%)

Query: 20  LNADEFRRQGQMIIDFIADYYQNIEKYPVLSQVEPGYLQKRLPHSAPDNPESIETILQDV 79
           ++A++ R QG M++DFIADYY+ IE +PVLSQV+PGYL K LP SAP +PES++ +L DV
Sbjct: 53  MDAEQLREQGHMMVDFIADYYKTIENFPVLSQVQPGYLGKLLPDSAPTHPESLQHVLNDV 112

Query: 80  RKHILPGITHWQSPNYFAYFAASGSTASFLGEMLSTGFNIVGFNWLSSPAATELESIVMD 139
           ++ ILPG+THWQSPNYFAYF ++ S A FLGEMLS G +IVGF+W+SSPAATELE+IV+D
Sbjct: 113 QEKILPGVTHWQSPNYFAYFPSNSSIAGFLGEMLSAGLSIVGFSWISSPAATELETIVLD 172

Query: 140 WLGQVLQLPSCFLFSGSGGGVIQGTTCEAILCTLIAARDQMLRSIGKEKIGKLVVYASDQ 199
           WL + L LP  F  +G GGGVIQGT  EA+L  L+AARD++LR++G+  + KLV YASDQ
Sbjct: 173 WLAKALLLPHDFFSTGQGGGVIQGTASEAVLVVLVAARDKILRTVGRSALPKLVTYASDQ 232

Query: 200 THSALQKAAQIAGISLENFRTIKTNKSTFFSMSPDSLRVTIQSDIEKGLIPLFLCATIGT 259
           THS+LQKA QIAG++ E  R +KT+ ST F++SPD L   I +DI  GL P FLCAT+GT
Sbjct: 233 THSSLQKACQIAGLNPELCRLLKTDSSTNFALSPDVLSEAISNDIASGLTPFFLCATVGT 292

Query: 260 TSTTAVDPLRPLCDVAREFNIWIHVDAAYAGNACICPEFQHFLDGLEDANSFSLNAHKWL 319
           TS+TAVDPL  L  V +  NIW+HVDAAYAG+ACICPE++HF+DG+E+A+SF++NAHKW 
Sbjct: 293 TSSTAVDPLPALAKVTKPNNIWLHVDAAYAGSACICPEYRHFIDGVEEADSFNMNAHKWF 352

Query: 320 LTNLDCCCLWVKDPNALIKSLSTNPEYLKNKASDSAQVVDYKDWQIALSRRFRSLKLWLV 379
           LTN DC  LWVKD +ALI+SLSTNPE+LKNKAS    V+DYKDWQI L RRFRSLKLW+V
Sbjct: 353 LTNFDCSVLWVKDRSALIQSLSTNPEFLKNKASQENTVIDYKDWQIPLGRRFRSLKLWMV 412

Query: 380 LRSYGVRNLRTFLGRHVEMAKVFEGLVREDKMFEIVVPRNFAMVCFRIVPGAIEMGKDGV 439
           +R YG+  LRT +  H+ +A  FE LV +D  F++V PR F++VCFR++P          
Sbjct: 413 MRLYGLEGLRTHIRSHIALAVYFEELVVQDTRFKVVAPRTFSLVCFRLLPPQ-------- 464

Query: 440 QMLPDREILANELNRRLLESINASGCIFMTHGMVGGVYFMRFAVGATLTEDHHVIMAWKV 499
               + E   N+LN  LL+++N++G +F+TH ++ G Y +R AVGA LTE  HV  AW++
Sbjct: 465 ----NSEDNGNKLNHDLLDAVNSTGDVFITHTVLSGEYILRLAVGAPLTEVRHVHAAWQI 520