Jatropha Genome Database

JcCA0300141.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0300141.10 - phase: 0 /partial
         (465 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g078040.1 Inositol 1, 3, 4-trisphosphate 56-kinase ch...    65   5e-11
IMGA|Medtr5g005520.1 Ribosomal protein L19; Inositol 1, 3, 4-tri...    58   1e-08

>IMGA|Medtr8g078040.1 Inositol 1, 3, 4-trisphosphate 56-kinase
           chr08_pseudomolecule_IMGAG_V3 15696781-15695040 E
           EGN_Mt090430 20090702
          Length = 385

 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 105/234 (44%), Gaps = 26/234 (11%)

Query: 239 QELQGYMEDPSNCFVIDPLDKIYPVVDRLKIQQILLGLE---DINTEGRNTIRGPHFLKV 295
           ++LQ +     N  ++D  + I  + +R+ + Q++  L     ++ +G  T   P  + +
Sbjct: 66  RQLQQFQIRNPNAVILDAPEAIERLHNRISMLQVVSELRVRVGVDEKGGETFGIPKQIVI 125

Query: 296 NDFNEPNLVQRLLEAKLTLPSIVKPQVACGIADAHSMAIVFGVEDFKGLSVPLPAVVQEY 355
             +++  L        L  P I KP VA G A +H MA+VF       L  P+  V+QE+
Sbjct: 126 --YDKETLSDGQAWESLKFPVIAKPLVADGSAKSHKMALVFSHGALNKLKPPI--VLQEF 181

Query: 356 VDHSSTLFKIYVLGEKVFYAIKKSMPNVDVLMKLPERNGPLIFDRF-----RVQFDNPKL 410
           V+H   +FK+YV+G  V    +KS+P+V     L      L F +      R   D+ + 
Sbjct: 182 VNHGGVIFKVYVVGNHVRCVKRKSLPDVSEEKVLGVSEDLLSFSQVSNLANRDSVDDDE- 240

Query: 411 NVHSLKSLPTGTEGSGSKDFFTPNSHYFDVGLVTDAANWLARKLDLTIFGFDVV 464
             + + SL   TE         P +       + D A+ L R + L +F FDV+
Sbjct: 241 KFYKMMSLDDTTE-------MPPQA------FIVDIASGLRRAMKLNLFNFDVI 281


>IMGA|Medtr5g005520.1 Ribosomal protein L19; Inositol 1, 3,
           4-trisphosphate 56-kinase chr05_pseudomolecule_IMGAG_V3
           209168-213863 E EGN_Mt090430 20090702
          Length = 322

 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 75/145 (51%), Gaps = 7/145 (4%)

Query: 241 LQGYMEDPSNCFVIDPLDKIYPVVDRLKIQQILLGLEDIN-TEGRNTIRGPHFLKV-NDF 298
           ++ Y        ++DP D I  +++R   Q +L  + ++N ++    +  P  L +  + 
Sbjct: 73  IEDYRHKHPEVTILDPPDAIQHLLNR---QSMLQNVAELNLSDCHGKVGVPQQLVITKNA 129

Query: 299 NEPNLVQRLLEAKLTLPSIVKPQVACGIADAHSMAIVFGVEDFKGLSVPLPAVVQEYVDH 358
           +   +   + +A + LP + KP V  G A +H + I +  ++   L +  P V+QE+V+H
Sbjct: 130 SASTIPYEVTKAGMKLPLVAKPLVVDGSAKSHELCIAY--DELSLLKLEPPLVLQEFVNH 187

Query: 359 SSTLFKIYVLGEKVFYAIKKSMPNV 383
              LFKIY++GE +    + S+PNV
Sbjct: 188 GGLLFKIYIVGETIKVVRRFSLPNV 212