Jatropha Genome Database

JcCA0299751.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0299751.20 + phase: 0 /partial
         (244 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g087990.1 Di-trans-poly-cis-decaprenylcistransferase ...   270   7e-73
IMGA|Medtr1g121440.1 Di-trans-poly-cis-decaprenylcistransferase ...   267   3e-72
IMGA|Medtr1g121110.1 Di-trans-poly-cis-decaprenylcistransferase ...   264   3e-71
IMGA|Medtr5g078680.1 Di-trans-poly-cis-decaprenylcistransferase ...    91   7e-19
IMGA|Medtr5g078710.1 Di-trans-poly-cis-decaprenylcistransferase ...    72   3e-13

>IMGA|Medtr8g087990.1 Di-trans-poly-cis-decaprenylcistransferase
           chr08_pseudomolecule_IMGAG_V3 18527683-18528833 E
           EGN_Mt090430 20090702
          Length = 360

 Score =  270 bits (689), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 124/207 (59%), Positives = 162/207 (78%)

Query: 11  SRVSELFGNLGGLLRICLFRILSMGPIPSHFAFIMDGNRRYAKKGNLKLGAGHRAGFESL 70
           S    L G L   LR C+F +LS GP+P+H AFIMDGNRRYA++ NL  G GH+AGF +L
Sbjct: 7   SITGHLLGGLYCCLRRCIFAVLSAGPLPNHIAFIMDGNRRYARRRNLGEGDGHKAGFSAL 66

Query: 71  ISILKYCYELGVKYVTIYAFSIDNFKRRPDEVKDLMDLMLEKIDELLKEESMAKQYGIRV 130
           +S+L+YCYELG+KYVT+YAFSIDNF+R+P EV+  M+LM EKI+ELL++ES+  +YG+R+
Sbjct: 67  LSVLRYCYELGIKYVTVYAFSIDNFRRKPKEVQTFMELMREKIEELLQQESIINEYGVRL 126

Query: 131 YFIGNLKLLSENVRIAAEKVMRATANNTKCTLLICLAYTSRDEILHAVQDSCKNKWEEIQ 190
           +FIGN++LL+E VRIAAE+ MR TA+N +  LLIC+AYTSRDEI+HAVQ+SCK+KW EIQ
Sbjct: 127 HFIGNMQLLTEPVRIAAERAMRVTAHNQERVLLICVAYTSRDEIVHAVQESCKDKWNEIQ 186

Query: 191 PLSFWKATNGGIQEIDDCKKMNGVTPH 217
           P    K +NG I  I+   K NG+  H
Sbjct: 187 PSKSDKVSNGEITRINQGPKRNGLNFH 213


>IMGA|Medtr1g121440.1 Di-trans-poly-cis-decaprenylcistransferase
           chr01_pseudomolecule_IMGAG_V3 26461750-26464002 E
           EGN_Mt090430 20090702
          Length = 360

 Score =  267 bits (683), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 122/204 (59%), Positives = 161/204 (78%)

Query: 11  SRVSELFGNLGGLLRICLFRILSMGPIPSHFAFIMDGNRRYAKKGNLKLGAGHRAGFESL 70
           S  S L G L   LR C+F +LS GP+P+H AFIMDGNRRYA++ N+  G GH+AGF +L
Sbjct: 7   SITSHLLGGLYCCLRRCIFAVLSAGPLPNHIAFIMDGNRRYARRRNMGEGDGHKAGFSAL 66

Query: 71  ISILKYCYELGVKYVTIYAFSIDNFKRRPDEVKDLMDLMLEKIDELLKEESMAKQYGIRV 130
           +S+L+YCYELG+KYVT+YAFSIDNF+R+P EV+  M+LM EKI+ELL++ES+  +YG+R+
Sbjct: 67  LSVLRYCYELGIKYVTVYAFSIDNFRRKPKEVQTFMELMREKIEELLQQESIINEYGVRL 126

Query: 131 YFIGNLKLLSENVRIAAEKVMRATANNTKCTLLICLAYTSRDEILHAVQDSCKNKWEEIQ 190
           +FIGN++LL+E VR+AAEK MR TA+N +  LLIC+AYTSRDEI+HAVQ+SCK+KW EIQ
Sbjct: 127 HFIGNMQLLTEPVRVAAEKAMRVTAHNQERVLLICVAYTSRDEIVHAVQESCKDKWNEIQ 186

Query: 191 PLSFWKATNGGIQEIDDCKKMNGV 214
           P    K +NG    I+   K NG+
Sbjct: 187 PSKEDKVSNGEFTRINQGLKRNGL 210


>IMGA|Medtr1g121110.1 Di-trans-poly-cis-decaprenylcistransferase
           chr01_pseudomolecule_IMGAG_V3 26316000-26314195 E
           EGN_Mt090430 20090702
          Length = 251

 Score =  264 bits (675), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 121/204 (59%), Positives = 160/204 (78%)

Query: 11  SRVSELFGNLGGLLRICLFRILSMGPIPSHFAFIMDGNRRYAKKGNLKLGAGHRAGFESL 70
           S  S L G L   LR C+F +LS GP+P+H AFIMDGNRRYA++ N+  G GH+AGF +L
Sbjct: 39  SITSHLLGGLYCCLRRCIFAVLSAGPLPNHIAFIMDGNRRYARRRNMGEGDGHKAGFSAL 98

Query: 71  ISILKYCYELGVKYVTIYAFSIDNFKRRPDEVKDLMDLMLEKIDELLKEESMAKQYGIRV 130
           +S+L+YCYELG+KYVT+YAFSIDNF+R+P EV+  M+LM EKI+ELL++ES+  +YG+R+
Sbjct: 99  LSVLRYCYELGIKYVTVYAFSIDNFRRKPKEVQTFMELMREKIEELLQQESIINEYGVRL 158

Query: 131 YFIGNLKLLSENVRIAAEKVMRATANNTKCTLLICLAYTSRDEILHAVQDSCKNKWEEIQ 190
           +FIGN++LL+E VR+AAEK MR TA+N +  LLIC+AYTSRDEI+HAVQ+SCK+KW EIQ
Sbjct: 159 HFIGNMQLLTEPVRVAAEKAMRVTAHNQERVLLICVAYTSRDEIVHAVQESCKDKWNEIQ 218

Query: 191 PLSFWKATNGGIQEIDDCKKMNGV 214
           P    K +NG    I+   K  G+
Sbjct: 219 PSKEDKVSNGEFTRINQGLKRYGL 242


>IMGA|Medtr5g078680.1 Di-trans-poly-cis-decaprenylcistransferase
           chr05_pseudomolecule_IMGAG_V3 29148457-29146350 E
           EGN_Mt090430 20090702
          Length = 310

 Score = 90.5 bits (223), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 89/154 (57%), Gaps = 7/154 (4%)

Query: 37  IPSHFAFIMDGNRRYAKKGNLKLGAGHRAGFESLISILKYCYELGVKYVTIYAFSIDNFK 96
           +P H A IMDGN R+AK   L   AGH AG +SL  ++  CY  G+K +T++AFS DN+ 
Sbjct: 78  MPKHVAVIMDGNGRWAKMRGLPASAGHVAGIKSLRRMVMLCYSWGIKVLTVFAFSTDNWI 137

Query: 97  RRPDEVKDLMDLMLEKIDELLKEESMAKQYGIRVYFIGNLKLLSENVRIAAEKVMRATAN 156
           R   EV+ LM L    I+  +  E++ ++ GI++  IG+   L ++++        +T  
Sbjct: 138 RPKVEVEFLMSLFERTINSEI--EALERE-GIQISVIGDTSKLPKSLKSMIASAEESTKE 194

Query: 157 NTKCTLLICLAYTSRDEILHAVQDSCKNKWEEIQ 190
           N K  L++ ++Y+ + +++ A    CK+  +++Q
Sbjct: 195 NPKFQLILAVSYSGKYDLVQA----CKSVAQKVQ 224


>IMGA|Medtr5g078710.1 Di-trans-poly-cis-decaprenylcistransferase
           chr05_pseudomolecule_IMGAG_V3 29154047-29152742 E
           EGN_Mt090430 20090702
          Length = 215

 Score = 71.6 bits (174), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/106 (38%), Positives = 59/106 (55%), Gaps = 6/106 (5%)

Query: 37  IPSHFAFIMDGNRRYAKKGNLKLGAGHRAGFESLISILKYCYELGVKYVTIYAFSIDNFK 96
           IP H A IMDGN R+AK   L L  GH AG +SL +++K C    +K +TI+ FS DN+ 
Sbjct: 81  IPKHVAVIMDGNGRWAKMRGLPLSEGHTAGMQSLKTMVKMCLRWEIKVLTIFMFSTDNWI 140

Query: 97  RRPDEVKDLMDLMLEKI-----DELLKEESMAKQYGIRVYFIGNLK 137
           R   EV+ L  L LE+I     + +++ E++     I V  +   K
Sbjct: 141 RPKLEVEFLFSL-LERIINSETEAIMRYETLTATLFIAVTLVDKKK 185