Jatropha Genome Database

JcCA0298471.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0298471.10 + phase: 0 
         (68 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g021610.1 Vacuolar H+-transporting two-sector ATPase,...    61   1e-10
IMGA|Medtr8g090270.1 Vacuolar H+-transporting two-sector ATPase,...    61   1e-10
IMGA|Medtr4g097470.1 Vacuolar H+-transporting two-sector ATPase,...    61   1e-10
IMGA|Medtr4g097360.1 Vacuolar H+-transporting two-sector ATPase,...    61   1e-10

>IMGA|Medtr5g021610.1 Vacuolar H+-transporting two-sector ATPase, C
           subunit chr05_pseudomolecule_IMGAG_V3 8286373-8283699 E
           EGN_Mt090430 20090702
          Length = 164

 Score = 61.2 bits (147), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/53 (66%), Positives = 35/53 (66%), Gaps = 3/53 (5%)

Query: 16  VADAEVELDPANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAE 68
           V DA V    ANAQQPKLFVGM            YGLIVGIILSSRAGQSRAE
Sbjct: 115 VGDAGVR---ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 164


>IMGA|Medtr8g090270.1 Vacuolar H+-transporting two-sector ATPase, C
           subunit chr08_pseudomolecule_IMGAG_V3 19653558-19655192
           E EGN_Mt090430 20090702
          Length = 164

 Score = 61.2 bits (147), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/53 (66%), Positives = 35/53 (66%), Gaps = 3/53 (5%)

Query: 16  VADAEVELDPANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAE 68
           V DA V    ANAQQPKLFVGM            YGLIVGIILSSRAGQSRAE
Sbjct: 115 VGDAGVR---ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 164


>IMGA|Medtr4g097470.1 Vacuolar H+-transporting two-sector ATPase, C
           subunit chr04_pseudomolecule_IMGAG_V3 20872715-20870479
           E EGN_Mt090430 20090702
          Length = 164

 Score = 61.2 bits (147), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/53 (66%), Positives = 35/53 (66%), Gaps = 3/53 (5%)

Query: 16  VADAEVELDPANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAE 68
           V DA V    ANAQQPKLFVGM            YGLIVGIILSSRAGQSRAE
Sbjct: 115 VGDAGVR---ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 164


>IMGA|Medtr4g097360.1 Vacuolar H+-transporting two-sector ATPase, C
           subunit chr04_pseudomolecule_IMGAG_V3 20814371-20816546
           F EGN_Mt090430 20090702
          Length = 164

 Score = 61.2 bits (147), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/53 (66%), Positives = 35/53 (66%), Gaps = 3/53 (5%)

Query: 16  VADAEVELDPANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAE 68
           V DA V    ANAQQPKLFVGM            YGLIVGIILSSRAGQSRAE
Sbjct: 115 VGDAGVR---ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 164