Jatropha Genome Database

JcCA0296911.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0296911.10 - phase: 0 /partial
         (296 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr6g012910.1 Glycosyl transferase, group 1 chr06_pseudom...   148   2e-36
IMGA|Medtr3g123800.1 Glycosyl transferase, group 1; N-6 Adenine-...    62   5e-10

>IMGA|Medtr6g012910.1 Glycosyl transferase, group 1
           chr06_pseudomolecule_IMGAG_V3 2547326-2554167 E
           EGN_Mt090430 20090702
          Length = 758

 Score =  148 bits (374), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/282 (40%), Positives = 148/282 (52%), Gaps = 47/282 (16%)

Query: 46  VSNGGFSLRFKPVRATAK----EGVNDDGSDDPLQATIEKSKKVLALQRDLLQQISERRK 101
           ++ G   L++K +RA  K    +   D+  DD L ATIEKSKKVLALQ++L+QQI+ER+K
Sbjct: 40  LNYGSVGLKYKHIRAVGKSIGNDENEDEDEDDVLNATIEKSKKVLALQKELIQQIAERKK 99

Query: 102 LVXXXXXXXFDQEIDRTSYDQRESS--------------LQPDNASTSRKNILEQQNGNG 147
           LV           ID  S    E +                P   ST   +    +N NG
Sbjct: 100 LVSS---------IDSDSIPGLEGNGISYESSEKSASSDSNPQKGSTRSGSGSAVENQNG 150

Query: 148 GIVPSSYVDSTADELPETASSAVSRSYF--KGEEEFEQPKS-PKTDSSVKNSTKQ----- 199
           G V  S V S   E  + +S+ +++ +   K   + E   S  + D   KN   +     
Sbjct: 151 GTVLRSSVHSREKETQDVSSAGINQDFVEQKKRNDAEMASSRQRFDEQFKNKRYEGKKSI 210

Query: 200 -----PKDASSEKSFLTNTLEVSVINDEKTEGSNESASPEVNNVGSDSMTEHAKPPPLAG 254
                PKD SS     +   E     + K E  +ES+S EV N   +  +E   PPPLAG
Sbjct: 211 RPDTVPKDLSSNIKTYSQKFE-----NLKRE--SESSSKEVTNEPENIESEGENPPPLAG 263

Query: 255 ANVMNVILVAAECAPWSKTGGLGDVAGSLPKALARRGHRVMV 296
            NVMN+ILVAAECAPWSKTGGLGDVAG+LPKALARRGHRVMV
Sbjct: 264 PNVMNIILVAAECAPWSKTGGLGDVAGALPKALARRGHRVMV 305


>IMGA|Medtr3g123800.1 Glycosyl transferase, group 1; N-6
           Adenine-specific DNA methylase
           chr03_pseudomolecule_IMGAG_V3 31238660-31231370 E
           EGN_Mt090430 20090702
          Length = 663

 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 27/38 (71%), Positives = 31/38 (81%)

Query: 259 NVILVAAECAPWSKTGGLGDVAGSLPKALARRGHRVMV 296
           N++ V +E AP+SKTGGL DV GSLP ALA RGHRVMV
Sbjct: 150 NIVFVTSEAAPYSKTGGLADVCGSLPIALAGRGHRVMV 187