Jatropha Genome Database
- JcCA0292601.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0292601.20 + phase: 0 /partial
(402 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr4g036540.1 Transcriptional factor B3; Zinc finger, CW-... 381 e-106
IMGA|Medtr5g083230.1 Transcriptional factor B3 chr05_pseudomolec... 300 7e-82
IMGA|Medtr2g014020.1 Transcriptional factor B3 chr02_pseudomolec... 215 4e-56
IMGA|Medtr7g080350.1 Transcriptional factor B3 chr07_pseudomolec... 135 3e-32
IMGA|Medtr7g096720.1 Transcriptional factor B3 chr07_pseudomolec... 87 1e-17
IMGA|AC233685_81.1 Transcriptional factor B3 AC233685.2 344120-3... 69 5e-12
IMGA|Medtr5g069060.1 Pathogenesis-related transcriptional factor... 67 1e-11
IMGA|Medtr2g013530.1 hypothetical protein chr02_pseudomolecule_I... 66 4e-11
IMGA|Medtr1g117930.1 Pathogenesis-related transcriptional factor... 63 3e-10
IMGA|Medtr1g147280.1 Pathogenesis-related transcriptional factor... 52 5e-07
IMGA|Medtr7g080360.1 hypothetical protein chr07_pseudomolecule_I... 52 8e-07
>IMGA|Medtr4g036540.1 Transcriptional factor B3; Zinc finger,
CW-type chr04_pseudomolecule_IMGAG_V3 8953556-8945623 E
EGN_Mt090430 20090702
Length = 900
Score = 381 bits (978), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/400 (52%), Positives = 254/400 (63%), Gaps = 16/400 (4%)
Query: 8 NVICTIRSPVHWKQG---SEGKTALAYGYLHRDFLRLVYCDTYHLEESGWRECYISEKRL 64
NV+C + + W++G G+ A + + +CD +H +ESGWREC KRL
Sbjct: 8 NVVCGTSTSIRWRKGWILRSGEFADLCDKCGSAYEQSAFCDMFHAKESGWRECTSCGKRL 67
Query: 65 HCGCIASKSLLQLLDFGGVGCTSCAKNYRLHPIRSDEIPNGFGLL-INNACDLESTPLEN 123
HCGC+ASKS L++LD GGV C +CA L PI S+E PN G +NN + L N
Sbjct: 68 HCGCVASKSQLEILDTGGVSCITCASTSGLQPIASNENPNESGTAKVNNVSAQQCITLAN 127
Query: 124 RVAGRTFDEGKLAQLCRLMEANAPNLLCQSEGADTNAGLGQFRQEEVMHQIVEXXXXXXX 183
++ R G A E + + D + GL + + EV+ + E
Sbjct: 128 QLNVRGMQVGNYA------ENDGMRCWLKPHNVDFD-GLSREIKPEVLPSVGEFGSTLMS 180
Query: 184 XXXXXXXXXXXXXPSILDMRDIHGSHAQPSLSMSMGAPSGTASFAPYPCGVVEGKEQSKT 243
+ DM+DI+ S AQ +LSM++ AP P+ +V+ +EQSK
Sbjct: 181 QFHRESNGSSRTGKAENDMQDIYESLAQTNLSMTLAAPLPN----PFHNVLVDEREQSKM 236
Query: 244 SP-FQQGQRSRPILPKPSKPVLAGSSETNKAAVSELRIARPPAEGRGKNQLLPRYWPRIT 302
SP RSR +LPKP +P L+ E N VS++RIARPPAEGRG+NQLLPRYWPRIT
Sbjct: 237 SPPLLLASRSRHLLPKPPRPALSPGLEGNTGMVSQIRIARPPAEGRGRNQLLPRYWPRIT 296
Query: 303 DQELQQLSGDLNSNIVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQSEGLPLRIQD 362
DQELQQ+SGD NS IVPLFEK+LSASDAGRIGRLVLPKACAEAYFPPISQ EGLPLRIQD
Sbjct: 297 DQELQQISGDSNSTIVPLFEKMLSASDAGRIGRLVLPKACAEAYFPPISQPEGLPLRIQD 356
Query: 363 VKGREWTFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDT 402
VKG+EW FQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDT
Sbjct: 357 VKGKEWMFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDT 396
>IMGA|Medtr5g083230.1 Transcriptional factor B3
chr05_pseudomolecule_IMGAG_V3 31558410-31553964 E
EGN_Mt090430 20090702
Length = 754
Score = 300 bits (769), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 175/371 (47%), Positives = 217/371 (58%), Gaps = 22/371 (5%)
Query: 42 VYCDTYHLEESGWRECYISEKRLHCGCIASKSLLQLLDFGGVGCTSCAKNYRLHPIRSDE 101
++CD +H E+GWR+C K +H GCI SKS + LDFGG+ C +C K +L + E
Sbjct: 13 LFCDKFHRHETGWRKCSNCSKPIHSGCIVSKSSFEYLDFGGITCVTCVKPSQL--CLNTE 70
Query: 102 IPNGFGLLI-NNACDLESTPLENRVAGRTFDEGKLAQLCRLMEANAPNLLCQSE------ 154
N F NNA D ++ R+ +G L QLCR+ E + Q++
Sbjct: 71 NHNRFSQTTKNNASDQYGEHIDGRLLVEQAGKGNLMQLCRIGEVGESSRWPQAQRDAMVS 130
Query: 155 --GADTNAGLGQFRQEEVMHQIVEXXXXXXXXXXXXXXXXXXXXPSILDMRDIHGSHAQP 212
G T QF +E+ V +D
Sbjct: 131 CIGPKTEEVKCQFNKEDTRFLNVMKHSSHLTAFTTLENNRPSWETKSID--------ETL 182
Query: 213 SLSMSMGAPSGTASFAPYPCGVVEGKEQSK-TSPFQQGQRSRPILPKPSKPVLAGSSETN 271
SL M++G S S P + EGK + K +S FQQGQ S+ IL + SK +A + ETN
Sbjct: 183 SLKMALGT-SSRNSVLPLATEIGEGKLEGKASSHFQQGQTSQSILAQLSKTGIAMNLETN 241
Query: 272 KAAVSELRIARPPAEGRGKNQLLPRYWPRITDQELQQLSGDLNSNIVPLFEKVLSASDAG 331
K +S RPPA+ +GKNQLL RYWPRITDQEL++LSGDL S +VPLFEKVLS SDAG
Sbjct: 242 KGMISH-PPRRPPADVKGKNQLLSRYWPRITDQELEKLSGDLKSTVVPLFEKVLSPSDAG 300
Query: 332 RIGRLVLPKACAEAYFPPISQSEGLPLRIQDVKGREWTFQFRFWPNNNSRMYVLEGVTPC 391
RIGRLVLPKACAEA+ P I QSEG+PL+ QD+ G EWTFQFRFWPNNNSRMYVLEGVTPC
Sbjct: 301 RIGRLVLPKACAEAFLPRILQSEGVPLQFQDIMGNEWTFQFRFWPNNNSRMYVLEGVTPC 360
Query: 392 IQSMQLQAGDT 402
IQS+QL AGDT
Sbjct: 361 IQSLQLNAGDT 371
>IMGA|Medtr2g014020.1 Transcriptional factor B3
chr02_pseudomolecule_IMGAG_V3 3428987-3437369 E
EGN_Mt090430 20090702
Length = 834
Score = 215 bits (547), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 99/132 (75%), Positives = 112/132 (84%)
Query: 271 NKAAVSELRIARPPAEGRGKNQLLPRYWPRITDQELQQLSGDLNSNIVPLFEKVLSASDA 330
+ + +++R RP A+ RG++QLLPRYWPR T+ ELQQ+S D NS I PLF+K LSASDA
Sbjct: 249 DSSGEAQVRNGRPRADARGRSQLLPRYWPRCTELELQQISVDSNSVITPLFQKTLSASDA 308
Query: 331 GRIGRLVLPKACAEAYFPPISQSEGLPLRIQDVKGREWTFQFRFWPNNNSRMYVLEGVTP 390
GRIGRLVLPK CAE YFPPISQ EGLPL+I D KG+EW FQFRFWPNNNSRMYVLEGVTP
Sbjct: 309 GRIGRLVLPKKCAETYFPPISQPEGLPLKILDAKGKEWIFQFRFWPNNNSRMYVLEGVTP 368
Query: 391 CIQSMQLQAGDT 402
CIQSMQLQAGDT
Sbjct: 369 CIQSMQLQAGDT 380
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 33/54 (61%)
Query: 43 YCDTYHLEESGWRECYISEKRLHCGCIASKSLLQLLDFGGVGCTSCAKNYRLHP 96
+CD +H SGWR C KR+HCGCI S S LLD GG+ C +CA+ + P
Sbjct: 12 FCDIFHANTSGWRNCETCRKRIHCGCIVSSSTFVLLDPGGIECFTCARKNVILP 65
>IMGA|Medtr7g080350.1 Transcriptional factor B3
chr07_pseudomolecule_IMGAG_V3 16965049-16963033 H
EGN_Mt090430 20090702
Length = 253
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 61/89 (68%), Positives = 75/89 (84%)
Query: 313 LNSNIVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQSEGLPLRIQDVKGREWTFQF 372
LNS +VPLFEK L+ASD GR+GR+VLPK+C E YFPPIS+ G+ L+I+DVKG++ F+F
Sbjct: 6 LNSAVVPLFEKTLTASDVGRLGRMVLPKSCVETYFPPISEPGGVYLQIEDVKGKKLVFKF 65
Query: 373 RFWPNNNSRMYVLEGVTPCIQSMQLQAGD 401
RFWPNN+SR+YVLEGV IQSMQLQ GD
Sbjct: 66 RFWPNNSSRIYVLEGVHAWIQSMQLQVGD 94
>IMGA|Medtr7g096720.1 Transcriptional factor B3
chr07_pseudomolecule_IMGAG_V3 21710203-21713365 H
EGN_Mt090430 20090702
Length = 314
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Query: 320 LFEKVLSASDAGRIGRLVLPKACAEAYFPPISQSEGLPLRIQDVKGRE-WTFQFRFWPNN 378
LF+K L SD + R+VLPK AEA+ P + EG+ L + D+ G W+F++RFWPNN
Sbjct: 126 LFQKELKNSDVSSLRRMVLPKKAAEAFLPVLESKEGILLSMDDLDGLHVWSFKYRFWPNN 185
Query: 379 NSRMYVLEGVTPCIQSMQLQAGDT 402
NSRMYVLE + + L+ GD+
Sbjct: 186 NSRMYVLENTGDFVSTHGLRFGDS 209
>IMGA|AC233685_81.1 Transcriptional factor B3 AC233685.2
344120-341990 E EGN_Mt090430 20090702
Length = 429
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 5/85 (5%)
Query: 320 LFEKVLSASDAGRIGRLVLPKACAEAYFP--PISQSEGLPLRIQDVKGREWTFQFRFWPN 377
+F+K ++ SD G++ RLV+PK AE YFP S +GL L +D G+ W F++ +W
Sbjct: 83 MFDKAVTPSDVGKLNRLVIPKQHAEKYFPLDSTSNEKGLLLNFEDRNGKLWRFRYSYW-- 140
Query: 378 NNSRMYVL-EGVTPCIQSMQLQAGD 401
N+S+ YV+ +G + ++ +L AGD
Sbjct: 141 NSSQSYVMTKGWSRFVKEKKLDAGD 165
>IMGA|Medtr5g069060.1 Pathogenesis-related transcriptional factor
and ERF; Transcriptional factor B3
chr05_pseudomolecule_IMGAG_V3 24901331-24899880 E
EGN_Mt090430 20090702
Length = 378
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 57/94 (60%), Gaps = 13/94 (13%)
Query: 320 LFEKVLSASDAGRIGRLVLPKACAEAYFP----------PISQSEGLPLRIQDVKGREWT 369
LFEKV++ SD G++ RLV+PK AE +FP + +G+ L +D+ G+ W
Sbjct: 194 LFEKVVTPSDVGKLNRLVIPKQHAEKHFPLQKADCVQGSASAAGKGVLLNFEDIGGKVWR 253
Query: 370 FQFRFWPNNNSRMYVL-EGVTPCIQSMQLQAGDT 402
F++ +W N+S+ YVL +G + ++ L+AGDT
Sbjct: 254 FRYSYW--NSSQSYVLTKGWSRFVKEKNLKAGDT 285
>IMGA|Medtr2g013530.1 hypothetical protein
chr02_pseudomolecule_IMGAG_V3 3065111-3069053 H
EGN_Mt090430 20090702
Length = 335
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 33/54 (61%)
Query: 43 YCDTYHLEESGWRECYISEKRLHCGCIASKSLLQLLDFGGVGCTSCAKNYRLHP 96
+CD +H SGWR C KR+HCGCI S S LLD GG+ C +CA+ + P
Sbjct: 46 FCDIFHANTSGWRNCETCRKRIHCGCIVSSSTFVLLDPGGIECFTCARKNVILP 99
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 35/48 (72%)
Query: 271 NKAAVSELRIARPPAEGRGKNQLLPRYWPRITDQELQQLSGDLNSNIV 318
+ + +++R RP A+ RG++QLLPRYWPR T+ ELQQ+S + SN +
Sbjct: 283 DSSGEAQVRNGRPRADARGRSQLLPRYWPRCTELELQQISVEYPSNYI 330
>IMGA|Medtr1g117930.1 Pathogenesis-related transcriptional factor
and ERF; Transcriptional factor B3
chr01_pseudomolecule_IMGAG_V3 25455779-25454341 F
EGN_Mt090430 20090702
Length = 384
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 18/98 (18%)
Query: 320 LFEKVLSASDAGRIGRLVLPKACAEAYFP---------------PISQSEGLPLRIQDVK 364
LFEK ++ SD G++ RLV+PK AE +FP + ++GL L +DV
Sbjct: 191 LFEKTVTPSDVGKLNRLVIPKQHAEKHFPLNAVAVAVACDGVSTAAAAAKGLLLNFEDVG 250
Query: 365 GREWTFQFRFWPNNNSRMYVL-EGVTPCIQSMQLQAGD 401
G+ W F++ +W N+S+ YVL +G + ++ L+AGD
Sbjct: 251 GKVWRFRYSYW--NSSQSYVLTKGWSRFVKEKNLRAGD 286
>IMGA|Medtr1g147280.1 Pathogenesis-related transcriptional factor
and ERF; Transcriptional factor B3
chr01_pseudomolecule_IMGAG_V3 32773097-32772164 E
EGN_Mt090430 20090702
Length = 298
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 320 LFEKVLSASDAGRIGRLVLPKACAEAYFPPISQSEGLPLRIQDVKGREWTFQFRFWPNNN 379
LF+K L+ SD G++ RLV+PK A YFP + ++ + + D R W F++ +W ++
Sbjct: 161 LFQKELTPSDVGKLNRLVVPKKHAVTYFPLVCGND-VEVVFYDKLMRLWKFRYCYWKSSQ 219
Query: 380 SRMYVLEGVTPCIQSMQLQAGDT 402
S ++ G ++ +L+A DT
Sbjct: 220 SYVFT-RGWNRFVKDKKLKAKDT 241
>IMGA|Medtr7g080360.1 hypothetical protein
chr07_pseudomolecule_IMGAG_V3 16965664-16965308 H
EGN_Mt090430 20090702
Length = 118
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 65/118 (55%), Gaps = 10/118 (8%)
Query: 200 LDMRDIHGSHAQPSLSMSMGAPSGTA-SFAPYPCGVVEGKEQSKTS--PFQQGQ-RSRPI 255
+ +R+I+ S A+ +LSM++ P G + SF G E ++Q++ S + Q +S+ +
Sbjct: 1 MKVREIYESLARTNLSMTLNTPFGNSNSF-----GGGEKQQQTENSIPNLSEAQPKSQNL 55
Query: 256 LPKPSKPVLAGSSETNKAAVSELR-IARPPAEGRGKNQLLPRYWPRITDQELQQLSGD 312
L K K LA SE N S + +AR R + + R P+ITDQELQQLSG+
Sbjct: 56 LHKLPKSTLATESEKNVCLASPIHHVARKSPVRRQRKHISARNLPKITDQELQQLSGE 113