Jatropha Genome Database

JcCA0291681.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0291681.10 - phase: 0 
         (395 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g079400.1 heat shock protein-related chr05_pseudomole...   322   2e-88
IMGA|Medtr3g094000.1 Blue (type 1) copper domain chr03_pseudomol...   297   8e-81
IMGA|Medtr8g127930.1 ATP binding, related, related chr08_pseudom...   150   9e-37
IMGA|Medtr1g112350.1 Immunoglobulin/major histocompatibility com...   130   2e-30
IMGA|Medtr2g042940.1 Clp, N terminal chr02_pseudomolecule_IMGAG_...   102   2e-22
IMGA|Medtr8g129850.1 ATP binding, related, putative chr08_pseudo...    90   2e-18

>IMGA|Medtr5g079400.1 heat shock protein-related
           chr05_pseudomolecule_IMGAG_V3 29547086-29552203 E
           EGN_Mt090430 20090702
          Length = 1092

 Score =  322 bits (825), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 203/403 (50%), Positives = 259/403 (64%), Gaps = 25/403 (6%)

Query: 1   MPTPVSVARQCLTDEXXXXXXXXXXXXXXXSHAQTTSLHAVSALLALPSSILRDACARAR 60
           MPTPVS ARQ LTDE               SHAQTTSLH +SALL+LPSS LRDA  RAR
Sbjct: 1   MPTPVSSARQFLTDEAARALDDAVAVARRRSHAQTTSLHTISALLSLPSSSLRDAICRAR 60

Query: 61  NS----PCSSRLQFRALELCVGVSLDRLSSSKT--LEEPPISNSLMAAIKRSQANQRRHP 114
            +      S RL  RALEL VGVSLDRL SSK   +EEPP+SNSLMAAIKRSQANQRR P
Sbjct: 61  TAVRFPSFSHRLHLRALELSVGVSLDRLPSSKPSPVEEPPVSNSLMAAIKRSQANQRRSP 120

Query: 115 DNFHLQQIHCNQQPPSVLKVELKYFILSILDDPIVSRVLGEAGFRSCDIKLAIIHPPVTP 174
           ++FH    + N   PS+LKVELK+F+LSILDDPIV+RV  EAGFRSCD+KLA++ PPV  
Sbjct: 121 ESFHF--YNHNGTTPSLLKVELKHFVLSILDDPIVNRVFSEAGFRSCDVKLALLQPPVQS 178

Query: 175 QAAKFSRTRYPPLFLYNLTGSDPVQPGLS-FPFSGREDVDEDCRRVSEALMXXXXXXXXX 233
            +   S    PP+FL NL   +P + GL+ FP      VDE+ RR++E ++         
Sbjct: 179 SSRFLSS---PPVFLCNL---EPGRTGLTPFPLG----VDENSRRIAE-VIAMKGKKMNP 227

Query: 234 XXXXVCAGDALNRFIE-CVNMDKEKILPSEISGLRVISIEKEIVEFVSEGGKEREKMGLK 292
               V A DA   F+E         + P  +SGL V+ +EKEIVEFV +GG E EKMGL+
Sbjct: 228 LLMGVYAKDAFRNFVELLQKGLGGGLFPPGMSGLSVVCVEKEIVEFVKDGGSE-EKMGLR 286

Query: 293 FEELRNELDQCSGPGVLLNVGELKGLVNKSDSIDDA-LSYLVSKLTGLVEGFRDKLWLMG 351
           F+E+  E+++C G GV++  GE++ LV   D +D   + ++VS+L  L+E + +K+WLMG
Sbjct: 287 FKEVGCEVEKCLGAGVVVGFGEIEVLVG--DDVDGGCIKFVVSELGRLLEVYGEKVWLMG 344

Query: 352 AAAKHETYSKLLGQFPAIEKDWDLHILPITSSKSPFDCFGSKS 394
            A   E YSK L  FP +EKDWDLH++ +TS+    +   SKS
Sbjct: 345 VAETSEAYSKFLRLFPGVEKDWDLHLVTVTSATPSMEGLYSKS 387


>IMGA|Medtr3g094000.1 Blue (type 1) copper domain
           chr03_pseudomolecule_IMGAG_V3 22444581-22447133 E
           EGN_Mt090430 20090702
          Length = 532

 Score =  297 bits (760), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 194/400 (48%), Positives = 242/400 (60%), Gaps = 36/400 (9%)

Query: 1   MPTPVSVARQCLTDEXXXXXXXXXXXXXXXSHAQTTSLHAVSALLALPSSIL-RDACARA 59
           MPTPVS ARQCLT E                HAQTTSLHA+SALL+LPSS + RDAC+R+
Sbjct: 1   MPTPVSSARQCLTPEAIQALNDAVAVAKRRGHAQTTSLHAISALLSLPSSSILRDACSRS 60

Query: 60  RNSPCSSRLQFRALELCVGVSLDRLSSSK----TLEEPPISNSLMAAIKRSQANQRRHPD 115
           RNS  S RLQF+AL+LC+ VSLDR  SS     +  EPP+SNSLMAAIKRSQANQRRHPD
Sbjct: 61  RNSAYSPRLQFKALDLCLSVSLDRSPSSHNNVSSDHEPPVSNSLMAAIKRSQANQRRHPD 120

Query: 116 NFHLQQIHCNQQPP-----SVLKVELKYFILSILDDPIVSRVLGEAGFRSCDIKLAIIHP 170
           NFH        Q       S +KVEL++ +LS+LDDP+VSRV  EAGFRS +IKLAI+ P
Sbjct: 121 NFHFYHQQQQLQSQQTFSVSSVKVELQHLVLSVLDDPVVSRVFAEAGFRSSEIKLAILRP 180

Query: 171 PVTPQAAKFSRTRYPPLFLYNL-----TGSDPVQPGLSFPFSGREDVDEDCRRVSEALMX 225
              P   +    R PP+FL NL      G+           SG  DVDE+ RR+ E L+ 
Sbjct: 181 --LPHLFR----RGPPVFLCNLPEQPRRGAGFGFGLGFPFLSGVGDVDENFRRIGEILVR 234

Query: 226 XXXXXXXXXXXXVCAGDALNRFIECVNMDKEKILPSEISGLRVISIEKEIVEFVSEGGKE 285
                        C  DAL  F E V   +E +LP E+ GLRVI I KE+     E G +
Sbjct: 235 SKGKNPLLLG--ACGNDALRSFTEAVEKRREGVLPLELDGLRVICIGKEL-----ESG-D 286

Query: 286 REKMGLKFEELRNELDQCSGPGVLLNVGELKGLVNKSDSIDDALSYLVSKLTGLVEGFRD 345
            E + LK +++   +++C GPGV+++ GELK  VN     DD     V +L  L++   D
Sbjct: 287 CEVVSLKLKQIAAIVEECVGPGVIVSFGELKSFVN-----DDG--GFVEELGKLLKIHYD 339

Query: 346 KLWLMGAAAKHETYSKLLGQFPAIEKDWDLHILPITSSKS 385
           K WL GAA  +E+Y K LG+FP++EKDWDL ILPITS K+
Sbjct: 340 KFWLAGAADSYESYLKFLGRFPSVEKDWDLQILPITSVKA 379


>IMGA|Medtr8g127930.1 ATP binding, related, related
           chr08_pseudomolecule_IMGAG_V3 29737927-29733698 E
           EGN_Mt090430 20090702
          Length = 1027

 Score =  150 bits (379), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 143/431 (33%), Positives = 206/431 (47%), Gaps = 72/431 (16%)

Query: 1   MPTPVSVARQCLTDEXXXXXXXXXXXXXXXSHAQTTSLHAVSALLALPSSILRDACARAR 60
           M   +S  +Q LT E               +H QTT LH  + LLA PS  LR AC ++ 
Sbjct: 1   MRAGLSTIQQTLTPEAASVLNHSIAEAGRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60

Query: 61  NSPCSSR-LQFRALELCVGVSLDRL-----SSSKTLEEPPISNSLMAAIKRSQANQRRHP 114
             P SS  LQ RALELC  V+L+RL     +SS +  EPPISN+LMAA+KR+QA+QRR  
Sbjct: 61  --PNSSHPLQCRALELCFSVALERLPTSQNASSTSAMEPPISNALMAALKRAQAHQRR-- 116

Query: 115 DNFHLQQIHCNQQPPSVLKVELKYFILSILDDPIVSRVLGEAGFRSCDIKLAIIHPPVTP 174
             +  QQ    QQP   +KVEL+  I+SILDDP VSRV+ EA F S  +K A I   +  
Sbjct: 117 -GYPEQQ----QQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVK-ATIEQSLNS 170

Query: 175 QAAKFSRTRYPPLFLYN----LTGSDPV----------QPGLSFPFSGREDVDEDCRRVS 220
            A         P+  +       G+ P           Q G +   SG    DE  +RV 
Sbjct: 171 VAPSPVTVNSNPMMGFRPGMVTPGAAPTRNLYMNPRLQQQGGAAALSGAHKGDE-VKRVV 229

Query: 221 EALMXXXXXXXXXXXXXVCAGD-----ALNRFIECVNMDKEKILPSEISGLRVISIEKEI 275
           E LM             V  G+     A+   ++ +  + +++     S    I +EKE+
Sbjct: 230 EILM------RTKKRNPVLVGESEPEAAIREVLKKI--ENKELGEGVFSNAHAIYLEKEL 281

Query: 276 VEFVSEGGKEREKMGLKFEELRNELDQCSGP-----GVLLNVGELKGLVN---------- 320
                    +R ++ ++ +EL + ++   G      GV +N+G+LK LV           
Sbjct: 282 P-------SDRGQIPVRIKELGDLIESRLGNSGSCGGVFINLGDLKWLVEQPVGFGLGNM 334

Query: 321 KSDSIDDALSYLVSKLTGLV----EGFRDKLWLMGAAAKHETYSKLLGQFPAIEKDWDLH 376
           +  ++ +A    V+++  LV    EG   KLWL+G A   ETY +     P++E DWDL 
Sbjct: 335 QQPALAEAGRAAVAEMGRLVAKFGEGGVGKLWLLGTAT-CETYLRCQVYHPSMENDWDLQ 393

Query: 377 ILPITSSKSPF 387
            +PIT ++SP 
Sbjct: 394 AVPIT-TRSPL 403


>IMGA|Medtr1g112350.1 Immunoglobulin/major histocompatibility
           complex; Clp, N terminal chr01_pseudomolecule_IMGAG_V3
           24141541-24138685 H EGN_Mt090430 20090702
          Length = 849

 Score =  130 bits (326), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 189/396 (47%), Gaps = 41/396 (10%)

Query: 6   SVARQCLTDEXXXXXXXXXXXXXXXSHAQTTSLHAVSALLALPSSILRDACARARNSPCS 65
           S+  Q LT E                HAQ T LH  SA+LA  + ILR AC +  + P  
Sbjct: 7   SIQLQALTQEAATVVKQAVNLATRRGHAQVTPLHVASAMLATSTGILRKACLQCHSHP-- 64

Query: 66  SRLQFRALELCVGVSLDRLSSS--------KTLEEPPISNSLMAAIKRSQANQRRHPDNF 117
             LQ +ALELC  V+L+RL +S        +    P +SN+L+AA KR+QA+QRR     
Sbjct: 65  --LQCKALELCFNVALNRLPASTQSPLLGPQYSTTPSLSNALVAAFKRAQAHQRR--GTI 120

Query: 118 HLQQIHCNQQPPSVLKVELKYFILSILDDPIVSRVLGEAGFRSCDIKLAIIHPPVTPQAA 177
             QQ    QQ    LK+E++  I+SILDDP VSRV+ EAGF S  +K  +      P   
Sbjct: 121 ENQQ----QQHILALKIEVEQLIISILDDPSVSRVMREAGFSSTLVKSRVEVEQALP--I 174

Query: 178 KFSRTRYPPLFLYNLTGSDPVQPGLSFPFSGREDVDEDCRRVSEALMXXXXXXXXXXXXX 237
           + S T+    +  N +    ++P +     G      DC   ++ +              
Sbjct: 175 EVSSTKVSSEYHKNQSKELSLKPQV-LSLGGSYTKPIDCVN-NDDVTSVLSELVKRRRNT 232

Query: 238 VCAGDALNRFIECVN--MDKEKI--LPSEISGLRVISIEKEIVEFVSEGGKEREKMGLKF 293
           V  G++++         M++ +I  +P E+  ++ +S+   ++ F +   +E EK   KF
Sbjct: 233 VIVGESVSNAEGVAKGVMERFEIGDVPMELRYVQFVSL--PLICFRNISKEEVEK---KF 287

Query: 294 EELRNELDQCSGPGVLLNVGELKGLVNKSDSIDD-------ALSYLVSKLTGLVEGFRD- 345
            E+R+ +    G GV+L +G+LK L     S  +       ++ ++V ++  LV G  + 
Sbjct: 288 VEVRSLVKSYMGRGVILYLGDLKWLFEFWSSYCEQKRNYYCSVEHMVMEIKKLVSGSGES 347

Query: 346 -KLWLMGAAAKHETYSKLLGQFPAIEKDWDLHILPI 380
            +LWLMG  A  +TY K     P++E  W+LH   I
Sbjct: 348 SRLWLMG-IANFKTYMKCKISHPSLETIWELHPFTI 382


>IMGA|Medtr2g042940.1 Clp, N terminal chr02_pseudomolecule_IMGAG_V3
           12163660-12168040 E EGN_Mt090430 20090702
          Length = 1020

 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 119/378 (31%), Positives = 181/378 (47%), Gaps = 37/378 (9%)

Query: 32  HAQTTSLHAVSALLALPSSILRDACARAR---NSPCSSRLQFRALELCVGVSLDRLSSSK 88
           HAQ T LH  + LL+LPSS LR+AC +++   N P    LQ RALELC  V+L+RL ++ 
Sbjct: 32  HAQITPLHVAATLLSLPSSSLRNACLKSQQQNNHP----LQCRALELCFNVALNRLPTTT 87

Query: 89  T------LEEPPISNSLMAAIKRSQANQRRHPDNFHLQQIHCNQQPPSVLKVELKYFILS 142
           T         P +SN+L+AA+KR+QA+QRR     + QQ    QQP   +KVEL   ILS
Sbjct: 88  TSPLLQPQHVPSLSNALIAALKRAQAHQRRGCIEQNQQQQ---QQPLLSVKVELDQLILS 144

Query: 143 ILDDPIVSRVLGEAGFRSCDIKLAIIHPPVTPQAAKFSRTRYPPL----FLYN------L 192
           ILDDP VSRV+ EAGF S  +K  + +      ++    +   PL    FL +      L
Sbjct: 145 ILDDPSVSRVMREAGFSSPSVKNNLENSSTLINSSSVFHSSPSPLSHNHFLSSYGYGSVL 204

Query: 193 TGSDPVQPGLSFPF-SGREDVDEDCRRVSEALMXXXXXXXXXXXXXVCAGDALNRFIECV 251
             S   +  +  PF    E   ED   V + L+             V   + L    E +
Sbjct: 205 FSSQKKEQVVYHPFLKSSESNKEDINLVFDVLLRKKKKNTVIVGDTVSLTEGL--VSEIM 262

Query: 252 NMDKEKILPSEISGLRVISIEKEIVEFVSEGGKEREKMGLKFEELRNELDQCS-GPGVLL 310
              +   +P E+     +         +    KE  +M +     R   D  + G G + 
Sbjct: 263 KRFERGEVPDEMKTTHFVKFHGLSSVSLKYMKKEEVEMNVIRVLKRKVSDYVALGVGAIF 322

Query: 311 NVGELKGLVNKSD---SIDDALSYLVSKLTGLV--EGFRD-KLWLMGAAAKHETYSKLLG 364
            VG+LK +V+ +D   +  + + Y+V ++  L   EG ++ K+WL+ A A +++Y +   
Sbjct: 323 YVGDLKWIVDDNDGSLNEKEVVDYVVEEIGKLFGEEGNKNGKIWLV-ATASYQSYMRCQM 381

Query: 365 QFPAIEKDWDLHILPITS 382
           + P  E  W L  +P+ S
Sbjct: 382 RVPTFENQWCLQAVPVPS 399


>IMGA|Medtr8g129850.1 ATP binding, related, putative
           chr08_pseudomolecule_IMGAG_V3 30822020-30825229 E
           EGN_Mt090430 20090702
          Length = 820

 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/162 (39%), Positives = 89/162 (54%), Gaps = 10/162 (6%)

Query: 9   RQCLTDEXXXXXXXXXXXXXXXSHAQTTSLHAVSALLALPSSILRDACARAR---NSPCS 65
           +Q LT E                H Q T LH    LL L  S  + AC ++    +    
Sbjct: 9   QQTLTAEAASVLKHSLVLARRRGHPQVTPLHVAITLLTLRLSSFKRACLKSHQPHHQTSQ 68

Query: 66  SRLQFRALELCVGVSLDRLSSSKT---LEEPPISNSLMAAIKRSQANQRRHPDNFHLQQI 122
             LQ RALELC  V+L+RL ++ +     +P +SN+L+AA+KR+QA+QRR      ++Q 
Sbjct: 69  HPLQSRALELCFNVALNRLPTTPSPLIHSQPSLSNALIAALKRAQAHQRRGS----IEQQ 124

Query: 123 HCNQQPPSVLKVELKYFILSILDDPIVSRVLGEAGFRSCDIK 164
             +QQ    +KVEL+  I+SILDDP VSRV+ EAGF S  +K
Sbjct: 125 QQHQQTVLTVKVELEQLIISILDDPSVSRVMREAGFSSTLVK 166