Jatropha Genome Database

JcCA0289411.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0289411.10 - phase: 0 
         (547 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|AC233659_16.1 hypothetical protein AC233659.1 56005-69746 E...   823   0.0  
IMGA|Medtr2g014870.1 hypothetical protein chr02_pseudomolecule_I...   505   e-143
IMGA|Medtr2g014850.1 hypothetical protein chr02_pseudomolecule_I...   492   e-139
IMGA|Medtr2g014840.1 hypothetical protein chr02_pseudomolecule_I...   178   8e-45
IMGA|Medtr5g040980.1 hypothetical protein chr05_pseudomolecule_I...    96   5e-20

>IMGA|AC233659_16.1 hypothetical protein AC233659.1 56005-69746 E
            EGN_Mt090430 20090702
          Length = 1306

 Score =  823 bits (2127), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 403/544 (74%), Positives = 444/544 (81%), Gaps = 6/544 (1%)

Query: 4    SLDRIKCRLLEGTNAQEVRAMVLDMQARLLLDMLGKGIESALINPSALVPEPWQASGETL 63
            SLDRIKCRLLEG+NAQEVRAMVLDMQARLLLDMLG+GIESALI+P+  VPE WQASGETL
Sbjct: 739  SLDRIKCRLLEGSNAQEVRAMVLDMQARLLLDMLGRGIESALIDPTQFVPELWQASGETL 798

Query: 64   SSIDPEAMAVEPNLVPSIQAYVDAVLDLASHFITRLRRYASFCRTLASHAVTAGTGSNRX 123
            S+ID E MAVEP LVP +QAYVDA+LDLASHFITRLRRYASFCRTLASHAVTAGTGSNR 
Sbjct: 799  SNIDSETMAVEPALVPCVQAYVDAILDLASHFITRLRRYASFCRTLASHAVTAGTGSNRN 858

Query: 124  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWVQGAIAKISSTSDGVSNSTPNPISGP 183
                                             WVQGAIAKIS+T++G SN TPNPISGP
Sbjct: 859  MVASPTQSSATPATSQGGQNGSTSSMGTVQLQTWVQGAIAKISNTTEGGSNPTPNPISGP 918

Query: 184  SSFMPISINTGTFPGTPAVRLIGDCHFLHRLCQLLLFCYFFRRTQQLPRFIGGAQRNPDS 243
            SSFMPISINTGTFPGTPAVRLIGDC FLHRLCQLLLFC+FFRRTQ +PR++G A R  DS
Sbjct: 919  SSFMPISINTGTFPGTPAVRLIGDCQFLHRLCQLLLFCFFFRRTQ-IPRYMGAANRTNDS 977

Query: 244  NMQKPQPGAPGKVEEGNSVSSKLAPTMVRSDEGQAARGAQLVPGVKGAEDGPAGRSRLGS 303
            N QK    A GKVEE     +K    + +S++G   R  QL+ G KG E+ P+GRSRLGS
Sbjct: 978  NTQKSNAPASGKVEE----IAKPVSAVAKSEDGLTGRAGQLISGPKGGEEAPSGRSRLGS 1033

Query: 304  GNAGQGYTFEEVRVLFLILMDLCRRTSALAHPLPVSQVGSGNIQVRLHYIDGNYTVLPEV 363
            GNAGQGYTFEEV+VLF++LM+LCRRTS L HPLP+SQVGS NIQVRLHYIDGNYTVLPEV
Sbjct: 1034 GNAGQGYTFEEVKVLFMMLMELCRRTSTLQHPLPISQVGSSNIQVRLHYIDGNYTVLPEV 1093

Query: 364  VEASLGPHMQNMPRPRGADAAGLLLRELELHPPSEEWHRRNMFGGPWSDLEDTSSADDTP 423
            VEASLGPHMQNMPRPRGADAAGLLLRELELHPPSEEW+RRNMFGGPWSD +D   A+D P
Sbjct: 1094 VEASLGPHMQNMPRPRGADAAGLLLRELELHPPSEEWNRRNMFGGPWSDPDDIDCANDQP 1153

Query: 424  RQSSYTDSLDFSSLENCDVYCGVNGLWPKKRRMSERDAAFGLNTSVGLGAYLGIMGSRRD 483
            +    +D LD SS E+CD Y G + LWP+KRRMSERDAAFGLN+SVGLGAYLGIMGSRRD
Sbjct: 1154 KIVC-SDPLDLSSTEHCDAYDGTHRLWPRKRRMSERDAAFGLNSSVGLGAYLGIMGSRRD 1212

Query: 484  VVTAVWKTGLEGVWYKCIRCLRQTSAFASPGATSPPNQNEREAWWISRWAYGCPMCGGTW 543
            VVTA WKTGLEGVWYKCIRC RQTSAF SP +T+ P+Q+ RE WWISRWAYGCPMCGGTW
Sbjct: 1213 VVTATWKTGLEGVWYKCIRCQRQTSAFTSPASTTSPSQSSRELWWISRWAYGCPMCGGTW 1272

Query: 544  VRVV 547
            VRV+
Sbjct: 1273 VRVM 1276


>IMGA|Medtr2g014870.1 hypothetical protein
           chr02_pseudomolecule_IMGAG_V3 3934842-3932048 E
           EGN_Mt090430 20090702
          Length = 439

 Score =  505 bits (1301), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 284/478 (59%), Positives = 327/478 (68%), Gaps = 40/478 (8%)

Query: 71  MAVEPNLVPSIQAYVDAVLDLASHFITRLRRYASFCRTLASHAVTAGTGSNRXXXXXXXX 130
           MAVEP L   IQAYVD+VLDLA  F TRLR YA FCRTLAS A TAG  SN+        
Sbjct: 1   MAVEPALNSCIQAYVDSVLDLALSFFTRLRCYAKFCRTLASQAATAGNVSNQNMVASPAQ 60

Query: 131 XXXXXXXXXXXXXXXXXXXXXXXXXAWVQGAIAKISSTSDGVSNSTP-NPISGPSSFMPI 189
                                    AWVQ AIAKISSTSDGVSN TP +PI GPSS MPI
Sbjct: 61  NSTTPETSQGGENGTTISGGSTQMNAWVQEAIAKISSTSDGVSNLTPTSPIGGPSSLMPI 120

Query: 190 SINTGTFPGTPAVRLIGDCHFLHRLCQLLLFCYFFRRTQQLPRFIGGAQRNPDSNMQKPQ 249
           SINT TFPGTPAVRLIGDCHFL RLCQLL FC+FF+R+Q L  ++ G +R  ++      
Sbjct: 121 SINTETFPGTPAVRLIGDCHFLQRLCQLLFFCFFFKRSQ-LVLYMNGLRRTAET------ 173

Query: 250 PGAPGKVEEGNSVSSKLAPTMVRSDEGQAARGAQLVPGVKGAEDGPAGRSRLGSGNAGQG 309
                              ++VRSD+GQ  R  Q+V G KG E+   G  RLG+GN+GQG
Sbjct: 174 -------------------SLVRSDDGQTGRAGQIVHGSKGGEEPSLGHIRLGTGNSGQG 214

Query: 310 YTFEEVRVLFLILMDLCRRTSALAHPLPVSQVGSGNIQVRLHYIDGNYTVLPEVVEASLG 369
           Y+F+EV+V+F +LMDLCRRTS L HPLPVSQVGS NIQVRLHYI+GNYTVLPEV+EASL 
Sbjct: 215 YSFKEVKVIFQVLMDLCRRTSGLQHPLPVSQVGSNNIQVRLHYIEGNYTVLPEVLEASLA 274

Query: 370 PHMQNMPRPRGADAAGLLLRELELHPPSEEWHRRNMFGGPWSDLEDTSSADDTPRQSSYT 429
             + N+PRPRG D   LLLR+LEL PP+E WHR NMFGGP +D       DD+PR    +
Sbjct: 275 TQVHNIPRPRGVDDTRLLLRKLELLPPAEVWHRLNMFGGPCTD------PDDSPR-PVRS 327

Query: 430 DSLDFSSLENCDVYCGVNGLWPKKRRMSERDAAFGLNTSVGLGAYLGIMGSRRDVVTAVW 489
           + LD  SLE+ ++  G NGLWP+K RM ERDAAF LNTS      L IMGSRRDV+T  W
Sbjct: 328 NPLDSRSLESNNIDYGTNGLWPRKHRMIERDAAFALNTS------LDIMGSRRDVITTSW 381

Query: 490 KTGLEGVWYKCIRCLRQTSAFASPGATSPPNQNEREAWWISRWAYGCPMCGGTWVRVV 547
           KTGLEGVWYKCIRC+RQTSAF SP + + PNQNERE+WW+SRWA  CPMCGG WVRVV
Sbjct: 382 KTGLEGVWYKCIRCMRQTSAFTSPASANIPNQNERESWWVSRWATNCPMCGGRWVRVV 439


>IMGA|Medtr2g014850.1 hypothetical protein
            chr02_pseudomolecule_IMGAG_V3 3926919-3918528 H
            EGN_Mt090430 20090702
          Length = 1171

 Score =  492 bits (1267), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 273/466 (58%), Positives = 319/466 (68%), Gaps = 81/466 (17%)

Query: 83   AYVDAVLDLASHFITRLRRYASFCRTLASHAVTAGTGSNRXXXXXXXXXXXXXXXXXXXX 142
            AYVD+V+DLASH ITRLR YA   RTLA+ AVT  +GS                      
Sbjct: 786  AYVDSVIDLASHLITRLRHYAKIFRTLANQAVTVASGS---------------------- 823

Query: 143  XXXXXXXXXXXXXAWVQGAIAKISSTSDGVSNSTPNP-ISGPSSFMPISINTGTFPGTPA 201
                                     TS GV N T NP ISGPSS M ISINTGTFPGTPA
Sbjct: 824  -------------------------TSGGVPNLTLNPSISGPSSLMLISINTGTFPGTPA 858

Query: 202  VRLIGDCHFLHRLCQLLLFCYFFRRTQQLPRFIGGAQRNPDSNMQKPQPGAPGKVEEGNS 261
            VRLIGDCHFLHRLCQLL FC+FF+R+Q L R+  G +R  ++                  
Sbjct: 859  VRLIGDCHFLHRLCQLLFFCFFFKRSQ-LARYKSGLRRTAET------------------ 899

Query: 262  VSSKLAPTMVRSDEGQAARGAQLVPGVKGAEDGPAGRSRLGSGNAGQGYTFEEVRVLFLI 321
                   ++VRS++GQ  R  Q+VPG KG E+   G  RLG+GNAGQGY+ EEV+V+F +
Sbjct: 900  -------SLVRSNDGQTGRDRQIVPGSKGGEEPSPGPVRLGNGNAGQGYSVEEVKVIFQV 952

Query: 322  LMDLCRRTSALAHPLPVSQVGSGNIQVRLHYIDGNYTVLPEVVEASLGPHMQNMPRPRGA 381
            L+DLCRRTS L HPLPVSQVGS NIQV+LHYI+G+YTVLPEVVEASLGP+MQNMPR   A
Sbjct: 953  LLDLCRRTSGLQHPLPVSQVGSSNIQVQLHYIEGSYTVLPEVVEASLGPYMQNMPRLGDA 1012

Query: 382  DAAGLLLRELELHPPSEEWHRRNMFGGPWSDLEDTSSADDTPRQSSYTDSLDFSSLENCD 441
            D  GLLLREL+LHPP+EEWH+ NMF  P +D      ++DTP+    ++ LD  SLE+ D
Sbjct: 1013 DDTGLLLRELQLHPPAEEWHQLNMFVRPCTD------SNDTPKPFR-SNPLDSRSLESND 1065

Query: 442  VYCGVNGLWPKKRRMSERDAAFGLNTSVGLGAYLGIMGSRRDVVTAVWKTGLEGVWYKCI 501
            +  G NGL PKKRRM ERDAAFGLNTS+GLGAYLGIMGSRRDV+T  WKTGLEGVWYKCI
Sbjct: 1066 IDYGTNGLRPKKRRMIERDAAFGLNTSLGLGAYLGIMGSRRDVITTSWKTGLEGVWYKCI 1125

Query: 502  RCLRQTSAFASPGATSPPNQNEREAWWISRWAYGCPMCGGTWVRVV 547
            RC+RQTSAF S G+ + P+QNERE+WW+SRWAY CPMCGG WVRVV
Sbjct: 1126 RCMRQTSAFTSLGSANIPHQNERESWWVSRWAYSCPMCGGRWVRVV 1171



 Score =  127 bits (319), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 63/92 (68%), Positives = 73/92 (79%)

Query: 5   LDRIKCRLLEGTNAQEVRAMVLDMQARLLLDMLGKGIESALINPSALVPEPWQASGETLS 64
           LD IKCRLL G+NAQEVRA VLDMQAR+LLDMLGKGIESALINPSAL+P+PWQAS E LS
Sbjct: 631 LDMIKCRLLVGSNAQEVRATVLDMQARVLLDMLGKGIESALINPSALLPDPWQASEEILS 690

Query: 65  SIDPEAMAVEPNLVPSIQAYVDAVLDLASHFI 96
           + D E MAVEP L P IQ  +  +++    F+
Sbjct: 691 NFDMEEMAVEPELTPCIQVCLFTIVNWNYSFL 722


>IMGA|Medtr2g014840.1 hypothetical protein
           chr02_pseudomolecule_IMGAG_V3 3916025-3915370 E
           EGN_Mt090430 20090702
          Length = 164

 Score =  178 bits (451), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 97/156 (62%), Positives = 112/156 (71%), Gaps = 22/156 (14%)

Query: 372 MQNMPRPRGADAAGLLLRELELHPPSEEWHRRNMFGGPWSDLEDTSSADD--TPRQSSYT 429
           MQNMPR R A  AGLL+RELELH P+E+ HR NMFGGP +DL D    +D  TP  S+  
Sbjct: 3   MQNMPRSRVAGVAGLLVRELELHSPAEDCHRLNMFGGPCTDLGDEGCRNDAPTPVTSNPL 62

Query: 430 DSLDFSSLENCDVYCGVNGLWPKKRRMSERDAAFGLNTSVGLGAYLGIMGSRRDVVTAVW 489
           DS               NGLWP+KRRMSERDAAFGL+TSV LGAYLGIMGSRR++VT +W
Sbjct: 63  DS---------------NGLWPRKRRMSERDAAFGLSTSVDLGAYLGIMGSRREIVTTLW 107

Query: 490 KTGLEGVWYKCIRCLRQTSAFASPGATSPPNQNERE 525
           KTGLEGVWYK      QTS+FASP +T+PP QN+RE
Sbjct: 108 KTGLEGVWYKW-----QTSSFASPDSTNPPIQNDRE 138


>IMGA|Medtr5g040980.1 hypothetical protein
           chr05_pseudomolecule_IMGAG_V3 17527323-17528830 H
           EGN_Mt090430 20090702
          Length = 111

 Score = 95.9 bits (237), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 48/72 (66%), Positives = 56/72 (77%), Gaps = 1/72 (1%)

Query: 291 AEDGPAGRSRLGSGNAGQGYTFEEVRVLFLILMDLCRRTSALAHPLPVSQVGSGNIQVRL 350
           ++ G AG  RLG+ N GQGYT EEV  LF+ L +L RRT+ L HPLPVSQVGS NIQV L
Sbjct: 6   SQTGRAG-PRLGTENGGQGYTKEEVNALFVALNELSRRTAGLQHPLPVSQVGSNNIQVWL 64

Query: 351 HYIDGNYTVLPE 362
           HYI+G+YTVLPE
Sbjct: 65  HYIEGSYTVLPE 76