Jatropha Genome Database

JcCA0289051.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0289051.10 - phase: 0 
         (259 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g102720.1 GroEL-like chaperone, ATPase chr03_pseudomo...    67   8e-12
IMGA|Medtr3g024690.1 Protein kinase; GroEL-like chaperone, ATPas...    66   1e-11
IMGA|Medtr7g139240.1 Protein kinase; GroEL-like chaperone, ATPas...    66   1e-11
IMGA|Medtr4g136760.1 T-complex protein 1, alpha subunit chr04_ps...    60   9e-10
IMGA|Medtr3g024680.1 Chaperonin Cpn60/TCP-1 chr03_pseudomolecule...    51   5e-07
IMGA|Medtr5g094680.1 GroEL-like chaperone, ATPase chr05_pseudomo...    49   4e-06

>IMGA|Medtr3g102720.1 GroEL-like chaperone, ATPase
           chr03_pseudomolecule_IMGAG_V3 25119313-25123616 E
           EGN_Mt090430 20090702
          Length = 535

 Score = 67.0 bits (162), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 11/208 (5%)

Query: 14  DTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEINAGFFYSNAEQREAMVAA 73
           DT LV G+++D    HP M ++ E+  I       E  K +          E+ + +   
Sbjct: 217 DTELVYGIIVDKDMSHPQMPKQIEDAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRKQ 276

Query: 74  ERRQVDERVKRIIELKNKVCSGNDNNFVVINQKGIDPPSXXXXXXXXXXXXXXXXXXNME 133
           E++  D+ V++  ++            +VI Q G D  +                   +E
Sbjct: 277 EQKYFDDMVQQCKDV---------GATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELE 327

Query: 134 RLVLACGGEAVNSVDDLTPDCLGWAGLVYEHILG--EEKYTFVENVKNPHSCTILIKGPN 191
            + +A GG  V    +LT + LG AG+V E   G  +++  ++E+  N  + TI I+G N
Sbjct: 328 LIAIATGGRIVPRFQELTAEKLGKAGIVREKAFGTTKDRMLYIEHCANSRAVTIFIRGGN 387

Query: 192 DHTIAQIKDALRDGLRAVKNTIEDQAVV 219
              I + K ++ D L   +N I + ++V
Sbjct: 388 KMIIEETKRSIHDALCVARNLIRNNSIV 415


>IMGA|Medtr3g024690.1 Protein kinase; GroEL-like chaperone, ATPase
           chr03_pseudomolecule_IMGAG_V3 6286677-6281181 E
           EGN_Mt090430 20090702
          Length = 527

 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 98/217 (45%), Gaps = 15/217 (6%)

Query: 13  VDTRLVEGLVLDH--GSRHPDMKRRAENCYILTCNVSLEYEKSEINAGFFYSNAEQREAM 70
           +D+ L EG +LD   G   P   +R EN  IL  N +++ +K +I       ++  + A 
Sbjct: 205 IDSFLDEGFILDKKIGIGQP---KRIENAKILVANTAMDTDKVKIYGARVRVDSMTKVAE 261

Query: 71  V-AAERRQVDERVKRIIELKNKVCSGNDNNFVVINQKGIDPPSXXXXXXXXXXXXXXXXX 129
           +  AE+ ++ E+V       NK+     N FV  N++ I                     
Sbjct: 262 IEGAEKEKMKEKV-------NKIIGHGINCFV--NRQLIYNFPEELFADAGILAIEHADF 312

Query: 130 XNMERLVLACGGEAVNSVDDLTPDCLGWAGLVYEHILGEEKYTFVENVKNPHSCTILIKG 189
             +ERL L  GGE  ++ D+     LG   L+ E ++GE+K      V    +CTI+++G
Sbjct: 313 DGIERLALVTGGEIASTFDNPESVKLGQCELIEEIMIGEDKLIKFSGVAMGQACTIVLRG 372

Query: 190 PNDHTIAQIKDALRDGLRAVKNTIEDQAVVLVSFFPH 226
            + H + + + +L D L  +  T+ D  V+L   +P 
Sbjct: 373 ASHHVLDEAERSLHDALCVLSQTVNDSRVLLGGGWPE 409


>IMGA|Medtr7g139240.1 Protein kinase; GroEL-like chaperone, ATPase
           chr07_pseudomolecule_IMGAG_V3 33258678-33264538 E
           EGN_Mt090430 20090702
          Length = 527

 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 98/217 (45%), Gaps = 15/217 (6%)

Query: 13  VDTRLVEGLVLDH--GSRHPDMKRRAENCYILTCNVSLEYEKSEINAGFFYSNAEQREAM 70
           +D+ L EG +LD   G   P   +R EN  IL  N +++ +K +I       ++  + A 
Sbjct: 205 IDSFLDEGFILDKKIGLGQP---KRIENAKILVANTAMDTDKVKIYGARVRVDSMAKVAE 261

Query: 71  V-AAERRQVDERVKRIIELKNKVCSGNDNNFVVINQKGIDPPSXXXXXXXXXXXXXXXXX 129
           +  AE+ ++ E+V       NK+     N FV  N++ I                     
Sbjct: 262 IEGAEKEKMKEKV-------NKIIGHGINCFV--NRQLIYNFPEELFADAGILAIEHADF 312

Query: 130 XNMERLVLACGGEAVNSVDDLTPDCLGWAGLVYEHILGEEKYTFVENVKNPHSCTILIKG 189
             +ERL L  GGE  ++ D+     LG   L+ E ++GE+K      V    +CTI+++G
Sbjct: 313 DGIERLALVTGGEIASTFDNPESVKLGQCELIEEIMIGEDKLIKFSGVAMGQACTIVLRG 372

Query: 190 PNDHTIAQIKDALRDGLRAVKNTIEDQAVVLVSFFPH 226
            + H + + + +L D L  +  T+ D  V+L   +P 
Sbjct: 373 ASHHVLDEAERSLHDALCVLSQTVNDSRVLLGGGWPE 409


>IMGA|Medtr4g136760.1 T-complex protein 1, alpha subunit
           chr04_pseudomolecule_IMGAG_V3 33500055-33491463 F
           EGN_Mt090430 20090702
          Length = 544

 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 53/246 (21%), Positives = 101/246 (41%), Gaps = 17/246 (6%)

Query: 2   VEIMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEINAGFFY 61
           + I+    K   D+ L+ G  L+ G     M  R     I   + +L+  K ++      
Sbjct: 198 INILKAHGKSARDSFLMNGYALNTGRAAQGMPLRVSPAKIACLDFNLQKTKMQLGVQVLV 257

Query: 62  SNAEQREAMVAAERRQVDERVKRIIELKNKVCSGNDNNFVVINQKGIDPPSXXXXXXXXX 121
           S+  + E +   E     ER++++++      +G +   VV+  KGID  +         
Sbjct: 258 SDPRELEKIRQREADMTKERIEKLLK------AGAN---VVLTTKGIDDMALKYFVEAGA 308

Query: 122 XXXXXXXXXNMERLVLACGGEAVNSVDDLT------PDCLGWAGLVYEHILGEEKYTFVE 175
                    +M  +  A G   V++  D+       P  LG A  V E  + ++    ++
Sbjct: 309 IAVRRVRKEDMRHVAKATGATLVSTFADMEGEETFEPSFLGTADEVVEERIADDAVIMIK 368

Query: 176 NVKNPHSCTILIKGPNDHTIAQIKDALRDGLRAVKNTIEDQAVVLVSFFPHRNLRVGNWI 235
             K   + +++++G ND+ + ++  AL D L  VK T+E   VV         L V  ++
Sbjct: 369 GTKTSSAVSLILRGANDYMLDEMDRALHDALSIVKRTLESNTVVAGGGAVEAALSV--YL 426

Query: 236 KYFSAT 241
           +Y + T
Sbjct: 427 EYLATT 432


>IMGA|Medtr3g024680.1 Chaperonin Cpn60/TCP-1
           chr03_pseudomolecule_IMGAG_V3 6279027-6275140 E
           EGN_Mt090430 20090702
          Length = 898

 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 49/94 (52%)

Query: 132 MERLVLACGGEAVNSVDDLTPDCLGWAGLVYEHILGEEKYTFVENVKNPHSCTILIKGPN 191
           +ERL L   GE  +S D+     LG  GL+ E I+GE+       V    +CTI+++G +
Sbjct: 773 IERLALVPDGEIASSFDNPESVKLGLCGLIKEIIIGEDILIKFSGVAMGQACTIVLRGAS 832

Query: 192 DHTIAQIKDALRDGLRAVKNTIEDQAVVLVSFFP 225
            H + + + +L D +  +  T+ D  ++L   +P
Sbjct: 833 HHILDEAERSLHDAVCVLSQTVNDSRLLLGGRWP 866


>IMGA|Medtr5g094680.1 GroEL-like chaperone, ATPase
           chr05_pseudomolecule_IMGAG_V3 37476659-37485565 E
           EGN_Mt090430 20090702
          Length = 561

 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/209 (20%), Positives = 91/209 (43%), Gaps = 12/209 (5%)

Query: 14  DTRLVEGLVLDHGSRHPDMKRRAENCY---ILTCNVSLEYEKSEINAGFFYSNAEQREAM 70
           D+ LV G+       +   +++ +      IL  NV LE +  + NA    S+  Q +++
Sbjct: 210 DSFLVNGVAFKKTFSYAGFEQQPKKFLDPKILLLNVELELKSEKENAEIRLSDPSQYQSI 269

Query: 71  VAAERRQVDERVKRIIELKNKVCSGNDNNFVVINQKGIDPPSXXXXXXXXXXXXXXXXXX 130
           V AE   + +++ + ++   KV         V+++  I   +                  
Sbjct: 270 VDAEWNIIYDKLDKCVQSGAKV---------VLSRLAIGDLATQYFADRDIFCAGRVAEE 320

Query: 131 NMERLVLACGGEAVNSVDDLTPDCLGWAGLVYEHILGEEKYTFVENVKNPHSCTILIKGP 190
           +++R+  A GG    SV+++  + LG   +  E  +G E++       +  + TI+++G 
Sbjct: 321 DLKRVAAATGGTVQTSVNNIIDEVLGTCEIFEEKQVGNERFNIFNGCPSGQTATIVLRGG 380

Query: 191 NDHTIAQIKDALRDGLRAVKNTIEDQAVV 219
            D  I + + +L D +  V+  +++  VV
Sbjct: 381 ADQFIEEAERSLHDAIMIVRRAMKNSTVV 409