Jatropha Genome Database

JcCA0288061.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0288061.20 + phase: 0 
         (209 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g083470.2 hypothetical protein chr01_pseudomolecule_I...   207   2e-54
IMGA|Medtr1g083470.1 hypothetical protein chr01_pseudomolecule_I...   204   2e-53

>IMGA|Medtr1g083470.2 hypothetical protein
           chr01_pseudomolecule_IMGAG_V3 16418531-16416150 E
           EGN_Mt090430 20090702
          Length = 201

 Score =  207 bits (528), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 121/210 (57%), Positives = 144/210 (68%), Gaps = 20/210 (9%)

Query: 1   MFGMSYGEIFLLLGATAALIGPKDLPVIARTAGRLAGRAIGYVQLARGQFESVMQQSQAR 60
           M G S+GEIFLLLGATAA+IGPKDLP+I+RTAGRLAGRA+GYVQLARGQF+SVMQ+SQ  
Sbjct: 1   MLGFSFGEIFLLLGATAAVIGPKDLPMISRTAGRLAGRAVGYVQLARGQFDSVMQRSQVN 60

Query: 61  QVHKELQDTMAQLEAIRHEIRSISILSPGPLTRRLVDNVDNTSGSNANGICENQDVENTL 120
           QVHKELQ+TMAQLEAIRHEI SIS ++PGP TRR  DN+D  S SN N   E   V N++
Sbjct: 61  QVHKELQETMAQLEAIRHEIGSISFINPGPSTRRH-DNLDQASISNDNRKPEYAGVNNSI 119

Query: 121 KVTISQPSSEQRIGGSIATSAFSKASDSCSMHSQATVYARLAEAAAQKTSLLDSGADAEK 180
                          S    + S  S S +M SQAT YA LA+A A K     S A++ +
Sbjct: 120 S--------------SHTKDSTSLPSKSLNMQSQATAYASLAQAPAVKNG---SSANSTE 162

Query: 181 LID-DAGLP-NVLPVSAESAGMLPKRSGNN 208
           + D   GL   V+PVSAE+ G+LP R GNN
Sbjct: 163 VEDVKVGLQLIVMPVSAENTGLLPNRGGNN 192


>IMGA|Medtr1g083470.1 hypothetical protein
           chr01_pseudomolecule_IMGAG_V3 16418380-16416150 E
           EGN_Mt090430 20090702
          Length = 223

 Score =  204 bits (519), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 119/208 (57%), Positives = 142/208 (68%), Gaps = 20/208 (9%)

Query: 1   MFGMSYGEIFLLLGATAALIGPKDLPVIARTAGRLAGRAIGYVQLARGQFESVMQQSQAR 60
           M G S+GEIFLLLGATAA+IGPKDLP+I+RTAGRLAGRA+GYVQLARGQF+SVMQ+SQ  
Sbjct: 1   MLGFSFGEIFLLLGATAAVIGPKDLPMISRTAGRLAGRAVGYVQLARGQFDSVMQRSQVN 60

Query: 61  QVHKELQDTMAQLEAIRHEIRSISILSPGPLTRRLVDNVDNTSGSNANGICENQDVENTL 120
           QVHKELQ+TMAQLEAIRHEI SIS ++PGP TRR  DN+D  S SN N   E   V N++
Sbjct: 61  QVHKELQETMAQLEAIRHEIGSISFINPGPSTRRH-DNLDQASISNDNRKPEYAGVNNSI 119

Query: 121 KVTISQPSSEQRIGGSIATSAFSKASDSCSMHSQATVYARLAEAAAQKTSLLDSGADAEK 180
                          S    + S  S S +M SQAT YA LA+A A K     S A++ +
Sbjct: 120 S--------------SHTKDSTSLPSKSLNMQSQATAYASLAQAPAVKNG---SSANSTE 162

Query: 181 LID-DAGLP-NVLPVSAESAGMLPKRSG 206
           + D   GL   V+PVSAE+ G+LP R G
Sbjct: 163 VEDVKVGLQLIVMPVSAENTGLLPNRGG 190