Jatropha Genome Database

JcCA0286161.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0286161.30 - phase: 0 /partial
         (209 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g139430.1 Mevalonate kinase; chr07_pseudomolecule_IMG...   270   5e-73
IMGA|Medtr7g139430.2 Mevalonate kinase/phosphomevalonate kinase;...    87   7e-18
IMGA|Medtr2g129730.1 Mevalonate and galactokinase, putative chr0...    61   5e-10
IMGA|AC234701_21.1 Protein kinase AC234701.2 83146-81897 E EGN_M...    47   6e-06

>IMGA|Medtr7g139430.1 Mevalonate kinase;
           chr07_pseudomolecule_IMGAG_V3 33360851-33356524 E
           EGN_Mt090430 20090702
          Length = 388

 Score =  270 bits (689), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 134/211 (63%), Positives = 158/211 (74%), Gaps = 2/211 (0%)

Query: 1   MEVKARAPGKIILSGEHAVVHGSTAVASSINLYTYVTLSF--PTSENDGTLKLQLKDMAL 58
           MEVKARAPGKIIL+GEHAVVHGSTAVASSI+LYTYV+L F  P+SEN+ +L+L LKD AL
Sbjct: 1   MEVKARAPGKIILAGEHAVVHGSTAVASSIDLYTYVSLRFSTPSSENEESLRLLLKDTAL 60

Query: 59  EFSWPIGKIKEALPNLGAPSASTPTSCSIESVKSISALVEEQNIPEAKIALASGIAAFLW 118
           EF WPI +I+EA P   +  +STP SCS+E  KSI++LVEE NIPEAKI LASG+AAFLW
Sbjct: 61  EFEWPISRIREAFPESVSLLSSTPNSCSVECAKSIASLVEELNIPEAKIGLASGVAAFLW 120

Query: 119 LYTSIQGFRPATVVVTSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDKMHQGWLIFGE 178
           LY+SIQGF+PATVV+ SD                            +VD + QGW  FGE
Sbjct: 121 LYSSIQGFKPATVVINSDLPLGSGLGSSAAFCVALAAAFLAVTDSVSVDVIRQGWHSFGE 180

Query: 179 SELELLNKWAFEGEKLIHGKPSGIDNTVSTY 209
            EL+L+NKWAFEGEK+IHGKPSGIDNTVS+Y
Sbjct: 181 KELDLVNKWAFEGEKIIHGKPSGIDNTVSSY 211


>IMGA|Medtr7g139430.2 Mevalonate kinase/phosphomevalonate kinase;
           chr07_pseudomolecule_IMGAG_V3 33360851-33356524 E
           EGN_Mt090430 20090702
          Length = 279

 Score = 86.7 bits (213), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 50/84 (59%)

Query: 126 FRPATVVVTSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDKMHQGWLIFGESELELLN 185
           F+PATVV+ SD                            +VD + QGW  FGE EL+L+N
Sbjct: 19  FKPATVVINSDLPLGSGLGSSAAFCVALAAAFLAVTDSVSVDVIRQGWHSFGEKELDLVN 78

Query: 186 KWAFEGEKLIHGKPSGIDNTVSTY 209
           KWAFEGEK+IHGKPSGIDNTVS+Y
Sbjct: 79  KWAFEGEKIIHGKPSGIDNTVSSY 102


>IMGA|Medtr2g129730.1 Mevalonate and galactokinase, putative
           chr02_pseudomolecule_IMGAG_V3 31422059-31421898 H
           EGN_Mt090430 20090702
          Length = 53

 Score = 60.8 bits (146), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 30/39 (76%), Positives = 34/39 (87%)

Query: 79  ASTPTSCSIESVKSISALVEEQNIPEAKIALASGIAAFL 117
           +STP+SCSIE  KSI+ALVEE NIPEAKI LA G+AAFL
Sbjct: 15  SSTPSSCSIECAKSIAALVEELNIPEAKIELAFGVAAFL 53


>IMGA|AC234701_21.1 Protein kinase AC234701.2 83146-81897 E
           EGN_Mt090430 20090702
          Length = 113

 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 20/28 (71%), Positives = 23/28 (82%)

Query: 171 QGWLIFGESELELLNKWAFEGEKLIHGK 198
           +GW  FG  EL+L NKWAFEGEK+IHGK
Sbjct: 53  RGWQSFGVKELDLGNKWAFEGEKIIHGK 80