Jatropha Genome Database

JcCA0285321.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0285321.10 - phase: 2 /pseudo/partial
         (476 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g039870.1 Amine oxidase chr03_pseudomolecule_IMGAG_V3...   264   8e-71
IMGA|Medtr5g097430.1 Amine oxidase chr05_pseudomolecule_IMGAG_V3...    96   3e-20
IMGA|Medtr3g086600.1 Amine oxidase chr03_pseudomolecule_IMGAG_V3...    92   6e-19
IMGA|Medtr3g153970.1 Amine oxidase chr03_pseudomolecule_IMGAG_V3...    72   5e-13
IMGA|Medtr1g028330.1 Amine oxidase; SWIRM chr01_pseudomolecule_I...    68   9e-12
IMGA|Medtr3g086600.2 Amine oxidase chr03_pseudomolecule_IMGAG_V3...    67   2e-11
IMGA|Medtr3g076130.1 Amine oxidase; SWIRM chr03_pseudomolecule_I...    62   6e-10
IMGA|Medtr1g068220.1 Amine oxidase chr01_pseudomolecule_IMGAG_V3...    55   8e-08

>IMGA|Medtr3g039870.1 Amine oxidase chr03_pseudomolecule_IMGAG_V3
           10694186-10683854 E EGN_Mt090430 20090702
          Length = 501

 Score =  264 bits (674), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 164/450 (36%), Positives = 240/450 (53%), Gaps = 46/450 (10%)

Query: 40  KTLHEAGIQDILILEGSGRIGGRLMKAEFSGVTVEVGGTCPFG-GGHNPNPLLDIAKKLK 98
           K L E G++DI++LE S RIGGR+ K  F GV+VE+G     G GG   NP+ ++A +  
Sbjct: 23  KVLSENGVEDIVMLEASDRIGGRIRKECFGGVSVELGAGWIAGVGGREANPVWELAVQHN 82

Query: 99  LKTYTNDYGNVTANVLWTRVLYSTFFFLFYGGLYPKKVVDEIEKVAAQRSDFCTAVSK-N 157
           LKT  +DY N   N+           +   G L P  + D+  K A +     +A+ K  
Sbjct: 83  LKTCFSDYSNARFNI-----------YDQSGKLIPSGIADDSYKKAVE-----SAIQKLR 126

Query: 158 LSGKEKDVDVSILAAQRLYK--RYPQLHLKWXXXXXXXXXXMQSHQKXQAXSTNIPETSF 215
               E+D + +     ++ K    P+  ++           M   +         P +++
Sbjct: 127 DEEVEEDDEEANDDGNKVTKPSLTPKTPVELAIDFILHDFEMAEVE---------PISTY 177

Query: 216 VDHGPVPCFLVDPRGFEAIVEDLAKQFL---SSLTEDPKLKLNKVVRQINYSDDRVTVKT 272
           VD G     + D RG++ ++  +A+ FL        D +LKLNKVVR++ +S + VTV T
Sbjct: 178 VDFGEREFLVADERGYDHLLYKMAEGFLFTSEGRILDDRLKLNKVVRELQHSRNGVTVIT 237

Query: 273 GDGSTYNSKYVIVSASLGL--------------WKRIAISDFSMTIYTKIFLKFPYKFWA 318
            DG  Y + YVI+S S+G+              WK  AI    + +YTKIFLKFPY+FW 
Sbjct: 238 EDGCVYEANYVILSVSIGVLQSDLLAFNPPLPRWKLEAIEKCDVMVYTKIFLKFPYRFWP 297

Query: 319 TGPGTEFFLYTRVRRGYYPFWQHLENEYPGSNILIVTVTGDESRRIEQLSXXXXXXXXXX 378
            GP  EFF+Y   +RGYY FWQH++N YPGSNIL+VT+T  ES+R+E  +          
Sbjct: 298 CGPEKEFFMYAHEQRGYYTFWQHMDNAYPGSNILVVTLTNGESKRVEAQTNEETLREAMA 357

Query: 379 XLKKLFGNNIPKPEAILVPRWGLDELQKGSYANGPGSHNEKRKEHLADPVGPVYFTGEHT 438
            L+ +FG NIP    ILVP W  +  Q+GSY+N P   N K   ++  PVG ++FTGEHT
Sbjct: 358 VLRDMFGPNIPDAIDILVPCWWNNRFQRGSYSNFPIISNGKVFYNIKAPVGRIFFTGEHT 417

Query: 439 SNKYIGFATGSCFAGIDTANDLIKCIKEES 468
           S ++ G+  G   AGIDT   L++ I++E+
Sbjct: 418 SERFNGYVHGGYLAGIDTGKALVEEIRKEN 447


>IMGA|Medtr5g097430.1 Amine oxidase chr05_pseudomolecule_IMGAG_V3
           38819227-38814231 F EGN_Mt090430 20090702
          Length = 488

 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 116/438 (26%), Positives = 176/438 (40%), Gaps = 43/438 (9%)

Query: 40  KTLHEAGIQDILILEGSGRIGGRLMKAEFSGVTVEVGGTCPFGGGHNPNPLLDIAKKLKL 99
           + LH+A  Q +++LE   RIGGR+      G  V++G +    G  N NPL  +  +L L
Sbjct: 44  RALHDASFQ-VVLLESRDRIGGRIHTDYSFGFPVDLGASW-LHGVCNENPLAPLIGRLGL 101

Query: 100 KTYTNDYGNVTANVLWTRVLYSTFFFLFYGGLYPKKVVDEIEKVAAQRSDFCTAVSKNLS 159
             Y     N   +VL+   L S   F   G   P+++V E+ K           V +  S
Sbjct: 102 PLYRTCEDN---SVLYDHDLESYALFDMEGNQVPQELVTEVGKTFEMILQETDNVRQEFS 158

Query: 160 GKEKDVDVSILAAQRL-YKRYPQLHLKWXXXXXXXXXXMQSHQKXQAXSTNIPETSFVDH 218
                 D+SIL A  + ++R P+L L+            +      A S +I    +   
Sbjct: 159 E-----DMSILRALSIVFERKPELRLEGLSHKVLQWYLCRMEGWFAADSDSISLKCWDQE 213

Query: 219 GPVPC---FLVDPRGFEAIVEDLAKQFLSSLTEDPKLKLNKVVRQINYSDDRVTVKTGDG 275
             +P     +V  RG+  ++  LAK     L      +  K+VR  N     V V T +G
Sbjct: 214 ELLPGGHGLMV--RGYLPVIHTLAKGLDIRLGH----RATKIVRGYN----GVKVTTENG 263

Query: 276 STYNSKYVIVSASLGL--------------WKRIAISDFSMTIYTKIFLKFPYKFWATGP 321
            T+ +   I++  LG+              WK  AI+D  + +  KI L F   FW   P
Sbjct: 264 KTFVADAAIIAVPLGVLKANVIKFEPKLPDWKEAAIADIGVGVENKIILHFKNVFW---P 320

Query: 322 GTEFFLYTRVRRGYYPFWQHLENEYPGSNILIVTVTGDESRRIEQLSXXXXXXXXXXXLK 381
             EF            ++ +L ++  G  +L+    G  ++ IE++S           LK
Sbjct: 321 NVEFLGVVAETSYGCSYFLNL-HKAAGHPVLVYMPAGRLAKDIEKMSDEAAADFAFTQLK 379

Query: 382 KLFGNNIPKPEAILVPRWGLDELQKGSYANGPGSHNEKRKEHLADPVGPVYFTGEHTSNK 441
           K+   +   P   LV RWG D    GSY+           E L  PV  ++F GE TS  
Sbjct: 380 KIL-PDASSPIQYLVSRWGTDINSLGSYSFDAVGKPHGLYERLRVPVDNLFFAGEATSVL 438

Query: 442 YIGFATGSCFAGIDTAND 459
           Y G   G+   G   A D
Sbjct: 439 YTGSVHGAYSTGTMAAED 456


>IMGA|Medtr3g086600.1 Amine oxidase chr03_pseudomolecule_IMGAG_V3
           20299092-20305101 E EGN_Mt090430 20090702
          Length = 496

 Score = 91.7 bits (226), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 108/457 (23%), Positives = 185/457 (40%), Gaps = 31/457 (6%)

Query: 25  NVVFTNPKFSRIAAAKTLHEAGIQDILILEGSGRIGGRLMKAEFSGVTVEVGGTCPFGGG 84
           +V+      S IAAA+ LH+A  + + +LE   R+GGR+      G  V++G +    G 
Sbjct: 29  SVIVVGAGISGIAAARILHDASFK-VTLLESRDRLGGRIHTDYSFGCPVDMGASW-LHGV 86

Query: 85  HNPNPLLDIAKKLKLKTYTNDYGNVTANVLWTRVLYSTFFFLFYGGLYPKKVVDEIEKVA 144
            N NPL  + + L L  Y     +   +VL+   L S   F   G   P++ V E+ +  
Sbjct: 87  CNENPLAPLIRCLGLTLYRTSGDD---SVLYDHDLESCMLFDIDGHQVPQQTVIEVGETF 143

Query: 145 AQRSDFCTAVSKNLSGKEKDVDVSILAAQRLYKRYPQLHLKWXXXXXXXXXXMQSHQKXQ 204
            +         K      +D+ VS  A   +  R+PQL  +            +      
Sbjct: 144 KR---ILEETGKVRDEHPEDISVS-EAISIVLDRHPQLRQQGLSHEVLQWYICRMEAWFA 199

Query: 205 AXSTNIPETSFVDHGPVPCFLVDPRGFEAIVEDLAKQFLSSLTEDPKLKLNKVVRQINYS 264
           A +  I   ++     +   L    G   ++    K  +++L +D  ++LN  V +I+  
Sbjct: 200 ADADMISLKTWDQASAIEHVL---SGGHGLMVQGYKPVINALAKDIDIRLNHRVTKISSG 256

Query: 265 DDRVTVKTGDGSTYNSKYVIVSASLGL--------------WKRIAISDFSMTIYTKIFL 310
            ++V V   DG  + +   I++  +G+              WK  AISD  +    KI L
Sbjct: 257 YNKVMVTLEDGRNFVADAAIITVPIGILKANLIEFEPRLPDWKVSAISDLGVGNENKIAL 316

Query: 311 KFPYKFWATGPGTEFFLYTRVRRGYYPFWQHLENEYPGSNILIVTVTGDESRRIEQLSXX 370
           KF   FW   P  E             ++ +L ++  G+ +L+    G  +  +E+LS  
Sbjct: 317 KFDKVFW---PDVELMGVVAPTSYACGYFLNL-HKATGNPVLVYMAAGRFAYDLEKLSDE 372

Query: 371 XXXXXXXXXLKKLFGNNIPKPEAILVPRWGLDELQKGSYANGPGSHNEKRKEHLADPVGP 430
                    LKK+F +   +P   LV  WG D    G Y+      +    + L  P+G 
Sbjct: 373 SAANFVMLQLKKMFPDAC-EPVQYLVSHWGTDPNSLGCYSYDLVGKSMDVYDKLRAPLGN 431

Query: 431 VYFTGEHTSNKYIGFATGSCFAGIDTANDLIKCIKEE 467
           ++F GE  S    G   G+  AG+  A +  + + E+
Sbjct: 432 IFFGGEAMSLDNQGSVHGAYSAGVMAAENCQRYLWEK 468


>IMGA|Medtr3g153970.1 Amine oxidase chr03_pseudomolecule_IMGAG_V3
           40614967-40624335 E EGN_Mt090430 20090702
          Length = 1328

 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 113/270 (41%), Gaps = 40/270 (14%)

Query: 218 HGPVPCFLVDPRGFEAIVEDLAKQFLSSLTEDPKLKLNKVVRQINYSD------DRVTVK 271
           +G   C +    G+  +VE L K  +        + LN VV  ++Y        ++V V 
Sbjct: 398 YGGAHCMI--KGGYSTVVESLGKGLV--------IHLNHVVTNVSYDSKESGLGNKVKVS 447

Query: 272 TGDGSTYNSKYVIVSASLGL--------------WKRIAISDFSMTIYTKIFLKFPYKFW 317
           T +G+ +    V+V+  LG               WK  +I      +  K+ L+FP  FW
Sbjct: 448 TSNGNEFFGDAVLVTVPLGCLKAETIKFSPPLPPWKYSSIQRLGFGVLNKVVLEFPSVFW 507

Query: 318 ATGPGTEFFLYT---RVRRGY-YPFWQHLENEYPGSNILIVTVTGDESRRIEQLSXXXXX 373
                 ++F  T     RRG+ + FW     +  G+ +LI  V G  +   + LS     
Sbjct: 508 --DDAVDYFGATAEETSRRGHCFMFWN--VKKTVGAPVLIALVVGKAAIDGQNLSSSGHV 563

Query: 374 XXXXXXLKKLFGN-NIPKPEAILVPRWGLDELQKGSYANGPGSHNEKRKEHLADPVGP-V 431
                 L+KLFG  ++P P A +V  WG D    G+Y+      + +  + L  PV   +
Sbjct: 564 NHALMVLRKLFGEASVPDPVAYVVTDWGGDPFSYGAYSYVAIGASGEDYDILGRPVDKCL 623

Query: 432 YFTGEHTSNKYIGFATGSCFAGIDTANDLI 461
           +F GE T  ++     G+  +G+  A  +I
Sbjct: 624 FFAGEATCKEHPDTVGGAMMSGLREAVRII 653


>IMGA|Medtr1g028330.1 Amine oxidase; SWIRM
            chr01_pseudomolecule_IMGAG_V3 6838806-6852075 E
            EGN_Mt090430 20090702
          Length = 1932

 Score = 68.2 bits (165), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 111/258 (43%), Gaps = 38/258 (14%)

Query: 230  GFEAIVEDLAKQFLSSLTEDPKLKLNKVVRQINY------SDDRVTVKTGDGSTYNSKYV 283
            G+  +VE L +  +        + LN  V  ++Y       +++V V T +GS +    V
Sbjct: 1100 GYSTVVESLGEGLV--------IHLNHAVTNVSYGIKEPGENNKVKVSTLNGSEFFGDAV 1151

Query: 284  IVSASLGL--------------WKRIAISDFSMTIYTKIFLKFPYKFWATGPGTEFFLYT 329
            +++  LG               WK  +I      +  K+ L+FP  FW      ++F  T
Sbjct: 1152 LITVPLGCLKAETIQFTPSLPEWKCSSIQRLGFGVLNKVILEFPTVFW--DDAVDYFGAT 1209

Query: 330  ---RVRRGY-YPFWQHLENEYPGSNILIVTVTGDESRRIEQLSXXXXXXXXXXXLKKLFG 385
               R +RG+ + FW     +  G+ +LI  V G  +   + LS           L+KLFG
Sbjct: 1210 AEERSKRGHCFMFWN--VKKTVGAPVLIALVVGKAAIDGQSLSSQDHINHALKVLRKLFG 1267

Query: 386  -NNIPKPEAILVPRWGLDELQKGSYANGPGSHNEKRKEHLADPV-GPVYFTGEHTSNKYI 443
             +++P P A +V  WG D    G+Y+      + +  + +  PV   ++F GE T  ++ 
Sbjct: 1268 EDSVPDPVAYVVTDWGRDPYSFGAYSYVAVGASGEDYDIIGRPVDNCLFFAGEATCKEHP 1327

Query: 444  GFATGSCFAGIDTANDLI 461
                G+  +G+  A  +I
Sbjct: 1328 DTVGGAMMSGLREAVRII 1345


>IMGA|Medtr3g086600.2 Amine oxidase chr03_pseudomolecule_IMGAG_V3
           20299092-20305101 E EGN_Mt090430 20090702
          Length = 270

 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 103/242 (42%), Gaps = 19/242 (7%)

Query: 240 KQFLSSLTEDPKLKLNKVVRQINYSDDRVTVKTGDGSTYNSKYVIVSASLGL-------- 291
           K  +++L +D  ++LN  V +I+   ++V V   DG  + +   I++  +G+        
Sbjct: 6   KPVINALAKDIDIRLNHRVTKISSGYNKVMVTLEDGRNFVADAAIITVPIGILKANLIEF 65

Query: 292 ------WKRIAISDFSMTIYTKIFLKFPYKFWATGPGTEFFLYTRVRRGYYPFWQHLENE 345
                 WK  AISD  +    KI LKF   FW   P  E             ++ +L ++
Sbjct: 66  EPRLPDWKVSAISDLGVGNENKIALKFDKVFW---PDVELMGVVAPTSYACGYFLNL-HK 121

Query: 346 YPGSNILIVTVTGDESRRIEQLSXXXXXXXXXXXLKKLFGNNIPKPEAILVPRWGLDELQ 405
             G+ +L+    G  +  +E+LS           LKK+F +   +P   LV  WG D   
Sbjct: 122 ATGNPVLVYMAAGRFAYDLEKLSDESAANFVMLQLKKMFPDAC-EPVQYLVSHWGTDPNS 180

Query: 406 KGSYANGPGSHNEKRKEHLADPVGPVYFTGEHTSNKYIGFATGSCFAGIDTANDLIKCIK 465
            G Y+      +    + L  P+G ++F GE  S    G   G+  AG+  A +  + + 
Sbjct: 181 LGCYSYDLVGKSMDVYDKLRAPLGNIFFGGEAMSLDNQGSVHGAYSAGVMAAENCQRYLW 240

Query: 466 EE 467
           E+
Sbjct: 241 EK 242


>IMGA|Medtr3g076130.1 Amine oxidase; SWIRM
           chr03_pseudomolecule_IMGAG_V3 17547835-17545029 E
           EGN_Mt090430 20090702
          Length = 748

 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 97/248 (39%), Gaps = 43/248 (17%)

Query: 241 QFLSSLTEDPKLKLNKVVRQINYSDDRVTVKTGDGSTYNSKYVIVSASLGLWKRI----- 295
           + + ++ E   +   K V  I Y ++ V +  GD   + + + + +  LG+ K+      
Sbjct: 356 RLIKAMCEGIPIFYGKTVNTIRYGNEGVEIIAGD-QVFQADFALCTVPLGVLKKKVINFE 414

Query: 296 ---------AISDFSMTIYTKIFLKFPYKFWATGPGT------------EFFLYTRVRRG 334
                    +I      +  K+ + FP+ FW     T            EFFL+     G
Sbjct: 415 PELPARKLESIERMGFGLLNKVAMVFPHVFWGEDLDTFGCLKENSHDRGEFFLF----YG 470

Query: 335 YYPFWQHLENEYPGSNILIVTVTGDESRRIEQLSXXXXXXXXXXXLKKLF---GNNIPKP 391
           Y+           G   LI  V G+ +   E              LK +F   G N+P P
Sbjct: 471 YHTV--------SGGPALIALVAGEAAHAFETTDPSILLNRVLTTLKGIFQPKGINVPDP 522

Query: 392 EAILVPRWGLDELQKGSYANGPGSHNEKRKEHLADPVGP-VYFTGEHTSNKYIGFATGSC 450
              +  RWG D    GSY++     + K  + LA+ VG  ++F GE TS +Y     G+ 
Sbjct: 523 IQSICTRWGSDPFSYGSYSHVSVQSSGKDYDILAENVGNRLFFAGEATSRQYPATMHGAF 582

Query: 451 FAGIDTAN 458
            +G+  A+
Sbjct: 583 MSGLREAS 590


>IMGA|Medtr1g068220.1 Amine oxidase chr01_pseudomolecule_IMGAG_V3
           13533759-13532022 E EGN_Mt090430 20090702
          Length = 241

 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 82/208 (39%), Gaps = 22/208 (10%)

Query: 241 QFLSSLTEDPKLKLNKVVRQINYSDDRVTVKTGDGSTYNSKYVIVSASLGLWKRIAIS-- 298
           + + +L E+  +   K V  I Y  D V V  G    +     + +  LG+ K+ +I   
Sbjct: 14  KLVQALAENVPILYEKTVNTIRYGSDGVQVIAGS-QVFEGDMALCTVPLGVLKKGSIKFI 72

Query: 299 ------------DFSMTIYTKIFLKFPYKFWATGPGTEFFLYTR-VRRG-YYPFWQHLEN 344
                            +  K+ + FP+ FW     T   L     RRG ++ F+ +   
Sbjct: 73  PELPQRKLDGIKRLGFGLLNKVAMLFPHVFWEMDLDTFGHLSDDPSRRGEFFLFYSY--A 130

Query: 345 EYPGSNILIVTVTGDESRRIEQLSXXXXXXXXXXXLKKLF---GNNIPKPEAILVPRWGL 401
              G  +LI  V G+ + + E +            LK ++   G N+P+P   +  RWG 
Sbjct: 131 TVAGGPLLIALVAGEAAHKFESMPPTDAVTKVLQILKGIYEPKGINVPEPIQTVCTRWGS 190

Query: 402 DELQKGSYANGPGSHNEKRKEHLADPVG 429
           D    GSY+N     +    + LA+ VG
Sbjct: 191 DPFCFGSYSNVAVGASGDDYDILAESVG 218