Jatropha Genome Database

JcCA0281391.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0281391.10 + phase: 0 
         (230 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|AC233661_2.1 Protein kinase-like AC233661.2 12270-6498 E EG...    55   2e-08
IMGA|Medtr8g128900.1 hypothetical protein chr08_pseudomolecule_I...    54   7e-08

>IMGA|AC233661_2.1 Protein kinase-like AC233661.2 12270-6498 E
           EGN_Mt090430 20090702
          Length = 689

 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/159 (22%), Positives = 75/159 (47%), Gaps = 7/159 (4%)

Query: 39  APHVVIVMDALREFTIEPLRWALENI-MAAGGVVTLLGIMPWLNIPLSSMTP-EVWAVTL 96
           A  VV++ DA R+  ++ +  AL+ + + AG  + ++ I+ W + P+  M   +      
Sbjct: 5   AQTVVVIQDASRDVGLKAIEKALKKLSVKAGDQLIIIAILNWFSSPMGYMVSVDSSYFVS 64

Query: 97  EELRVAQEILGYDLRMNSKYLK--LQQVVDLCKTFDVVLHKVVVMGFPLRLMVVEKLTAF 154
              ++ +E   Y  R N  ++   + ++ D C+T ++     V +G   ++   E +  F
Sbjct: 65  SNKKIIEE--NYSKRKNDYHMNRYINKLSDYCQTNEIEFQLEVRVGAASQV-TSEAVNQF 121

Query: 155 HPTWVVFDKHLKRNREFFARTIPCSMVMMNENGEADMIR 193
            PT ++ D+ + RN   F   IPC M  +  +   + ++
Sbjct: 122 QPTTLILDRQIHRNMTKFMDRIPCGMYRITSDNSIEKLK 160


>IMGA|Medtr8g128900.1 hypothetical protein
           chr08_pseudomolecule_IMGAG_V3 30280351-30278674 I
           EGN_Mt090430 20090702
          Length = 289

 Score = 53.9 bits (128), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 41/189 (21%), Positives = 88/189 (46%), Gaps = 19/189 (10%)

Query: 42  VVIVMDALREFTIEPLRWALENI-MAAGGVVTLLGIMPWLNIPLSSMTPEVWAVTLEELR 100
           VV++ DA RE   +   WA   + + +G  +TL+ ++  +  PL       + ++++  R
Sbjct: 6   VVVIHDASREINSKVFHWAPNGLSLNSGDNLTLVVVLHQVTAPLG------YKISVDN-R 58

Query: 101 VA----QEILGYDL-RMNSKYLK---LQQVVDLCKTFDVVLHKVVVMGFPLRLMVVEKLT 152
           +A    Q I+  ++ +   +Y+K   L  +  L K+  +  +  + MG   + + ++  T
Sbjct: 59  LAFGANQNIIEAEVAKKKEEYMKNEELAHIYKLYKSMKIGFNIEIAMGSSPKTVALKSAT 118

Query: 153 AFHPTWVVFDKHLKRNREFFARTIPCSMVMMNENGEADMIRG---QPMINSGEFTPSESP 209
               TW++ D+ +K + ++F   + C +  +  +     IRG    P      +  SE+ 
Sbjct: 119 KLKATWLILDRKMKNDEDYFLHKLSCGISRIRSSNRIIRIRGPIDTPQQQRRSYRSSETY 178

Query: 210 ASFIPTPEL 218
           AS I + +L
Sbjct: 179 ASSIQSHDL 187