Jatropha Genome Database

JcCA0278721.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0278721.10 + phase: 1 /partial
         (96 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g078680.1 Di-trans-poly-cis-decaprenylcistransferase ...   141   9e-35
IMGA|Medtr5g078690.1 Di-trans-poly-cis-decaprenylcistransferase ...   132   3e-32
IMGA|Medtr5g078720.1 Di-trans-poly-cis-decaprenylcistransferase ...   124   2e-29
IMGA|Medtr8g087990.1 Di-trans-poly-cis-decaprenylcistransferase ...    57   2e-09
IMGA|Medtr1g121440.1 Di-trans-poly-cis-decaprenylcistransferase ...    57   2e-09

>IMGA|Medtr5g078680.1 Di-trans-poly-cis-decaprenylcistransferase
           chr05_pseudomolecule_IMGAG_V3 29148457-29146350 E
           EGN_Mt090430 20090702
          Length = 310

 Score =  141 bits (355), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 63/83 (75%), Positives = 75/83 (90%)

Query: 1   CKSIAARVKDGLIEPEDITESLIEQELETNCSEFPSPDLLIRTSGELRISNFLLWQLAYT 60
           CKS+A +V+DG+I  EDI E++IE+ELETNC+EFP PDLLIRTSGELR+SNFLLWQLAYT
Sbjct: 216 CKSVAQKVQDGIIHLEDINENIIEKELETNCTEFPYPDLLIRTSGELRVSNFLLWQLAYT 275

Query: 61  ELFFAEELWPDFGKEGFVEALTS 83
           ELFF  +LWPDFGK+ F+EALTS
Sbjct: 276 ELFFNRKLWPDFGKDEFIEALTS 298


>IMGA|Medtr5g078690.1 Di-trans-poly-cis-decaprenylcistransferase
           chr05_pseudomolecule_IMGAG_V3 29150574-29150149 H
           EGN_Mt090430 20090702
          Length = 141

 Score =  132 bits (333), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 58/82 (70%), Positives = 73/82 (89%)

Query: 1   CKSIAARVKDGLIEPEDITESLIEQELETNCSEFPSPDLLIRTSGELRISNFLLWQLAYT 60
           CKS+A +V+DG +  EDI E++IE+ELET C+EFP+PDLLIRTSGELR+SNF+LWQLAY 
Sbjct: 47  CKSVAKKVQDGSLHLEDIDENIIEKELETKCTEFPNPDLLIRTSGELRVSNFMLWQLAYA 106

Query: 61  ELFFAEELWPDFGKEGFVEALT 82
           ELFF ++LWPDFGK+ FVEAL+
Sbjct: 107 ELFFNQKLWPDFGKDEFVEALS 128


>IMGA|Medtr5g078720.1 Di-trans-poly-cis-decaprenylcistransferase
           chr05_pseudomolecule_IMGAG_V3 29165122-29164507 H
           EGN_Mt090430 20090702
          Length = 151

 Score =  124 bits (310), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 56/83 (67%), Positives = 67/83 (80%)

Query: 1   CKSIAARVKDGLIEPEDITESLIEQELETNCSEFPSPDLLIRTSGELRISNFLLWQLAYT 60
           CKS+  +V+D +I  EDI E++I+ +LET C EFP PDLLIRT GELR+SNFLLWQLAYT
Sbjct: 56  CKSVTKKVQDRIIHLEDIDENIIKNDLETKCIEFPYPDLLIRTGGELRVSNFLLWQLAYT 115

Query: 61  ELFFAEELWPDFGKEGFVEALTS 83
           ELFF  +LWPDF K  FVEAL+S
Sbjct: 116 ELFFNRKLWPDFEKNDFVEALSS 138


>IMGA|Medtr8g087990.1 Di-trans-poly-cis-decaprenylcistransferase
           chr08_pseudomolecule_IMGAG_V3 18527683-18528833 E
           EGN_Mt090430 20090702
          Length = 360

 Score = 57.0 bits (136), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/47 (53%), Positives = 32/47 (68%)

Query: 35  PSPDLLIRTSGELRISNFLLWQLAYTELFFAEELWPDFGKEGFVEAL 81
           P PD+LIRTSGE R+SNFLLWQ +   L+  + LWP+ G    V A+
Sbjct: 297 PDPDILIRTSGEARLSNFLLWQTSACPLYAPKVLWPEIGLRHLVWAV 343


>IMGA|Medtr1g121440.1 Di-trans-poly-cis-decaprenylcistransferase
           chr01_pseudomolecule_IMGAG_V3 26461750-26464002 E
           EGN_Mt090430 20090702
          Length = 360

 Score = 57.0 bits (136), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/47 (53%), Positives = 32/47 (68%)

Query: 35  PSPDLLIRTSGELRISNFLLWQLAYTELFFAEELWPDFGKEGFVEAL 81
           P PD+LIRTSGE R+SNFLLWQ +   L+  + LWP+ G    V A+
Sbjct: 297 PDPDILIRTSGEARLSNFLLWQTSACPLYAPKVLWPEIGLRHLVWAV 343