Jatropha Genome Database

JcCA0277831.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0277831.10 - phase: 0 /partial
         (303 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g128500.1 Carbohydrate kinase, FGGY chr08_pseudomolec...   426   e-120
IMGA|Medtr8g128490.1 Carbohydrate kinase, FGGY chr08_pseudomolec...    53   2e-07
IMGA|Medtr4g005800.1 Glycerol kinase chr04_pseudomolecule_IMGAG_...    48   5e-06

>IMGA|Medtr8g128500.1 Carbohydrate kinase, FGGY
           chr08_pseudomolecule_IMGAG_V3 30018597-30015906 E
           EGN_Mt090430 20090702
          Length = 266

 Score =  426 bits (1094), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 211/252 (83%), Positives = 231/252 (91%)

Query: 12  RTVFLGVDVGTGSARAGLFNENGKLLGTASSPIQIWKERDCVEQSSTDIWHAICAAVKSA 71
           R+VFLGVDVGTGSARAGLF+E GKLLG++SSPIQIWK+   VEQSSTDIW A+C AVK+A
Sbjct: 11  RSVFLGVDVGTGSARAGLFDEEGKLLGSSSSPIQIWKDGAFVEQSSTDIWLAVCVAVKAA 70

Query: 72  CNLADVSGEEVTGIGFAATCSLVAVDSDGAPVSVSWSGDSRRNIIVWMDHRAVKQAEKIN 131
           C+ A V+  EV  +GFAATCSLVAVDSD +PVSVS SGDSRRN+IVWMDHRAV QAE+IN
Sbjct: 71  CSKAKVAAAEVKSLGFAATCSLVAVDSDSSPVSVSRSGDSRRNVIVWMDHRAVDQAERIN 130

Query: 132 SSNSPVLQYCGGALSPEMQPPKLLWVKENLQESWSMVFRWMDLSDWLSYRATGDDTRSLC 191
           +S SP L+YCGGA+SPEMQPPKLLWVKENLQESWSMVFRWMDLSDWLSYRATGDDTRSLC
Sbjct: 131 TSKSPALEYCGGAVSPEMQPPKLLWVKENLQESWSMVFRWMDLSDWLSYRATGDDTRSLC 190

Query: 192 TTVCKWTYLGHAHMHQINEKDSRDMEACGWDDDFWEEIGLGDLVDGHHAKIGRSVAFPGH 251
           TTVCKWTYLGHAHM  +N+ DSRDMEACGWDD+FWEEIGLGDLV+GHHAKIGRSVAFPGH
Sbjct: 191 TTVCKWTYLGHAHMQYVNDTDSRDMEACGWDDEFWEEIGLGDLVEGHHAKIGRSVAFPGH 250

Query: 252 ALGSGLTPTAAK 263
            LGSGLTPTAAK
Sbjct: 251 PLGSGLTPTAAK 262


>IMGA|Medtr8g128490.1 Carbohydrate kinase, FGGY
           chr08_pseudomolecule_IMGAG_V3 30015840-30011352 E
           EGN_Mt090430 20090702
          Length = 332

 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/44 (54%), Positives = 32/44 (72%)

Query: 254 GSGLTPTAAKELGLVAGTPVGTSLIDAHAGGVGIMESALEADSD 297
           G+   P    ELGL+ G PVGTSLIDAHAGGVG++ES   ++++
Sbjct: 9   GTTFFPFMETELGLLPGIPVGTSLIDAHAGGVGVIESVPPSETE 52


>IMGA|Medtr4g005800.1 Glycerol kinase chr04_pseudomolecule_IMGAG_V3
           457045-453054 E EGN_Mt090430 20090702
          Length = 519

 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 21/163 (12%)

Query: 11  RRTVFLG-VDVGTGSARAGLFNENGKLLGTASSPI-QIWKERDCVEQSSTDIWHAICAAV 68
           +  VF+G +D GT S+R  +++++ + +G+      Q + +   VE +  +I  ++   +
Sbjct: 3   KEDVFIGAIDQGTSSSRFIIYDKSAQPIGSHQVEFTQFYPQAGWVEHNPMEILESVKVCI 62

Query: 69  KSACNLADVSGEEV------TGIGFAATCSLVAVDSDGAPVSVSWSGDSRRNIIVWMDHR 122
             A + A  +G  V       G+      +LV   S GAP+          N +VWMD R
Sbjct: 63  TKAVDKATANGFNVDKGLKAIGLTNQRETTLVWSKSTGAPL---------HNALVWMDVR 113

Query: 123 AV---KQAEK-INSSNSPVLQYCGGALSPEMQPPKLLWVKENL 161
                ++ EK ++   +  ++ CG  +S      KLLW+ EN+
Sbjct: 114 TTSVCRRLEKELSGGRTHFVESCGLPISTYFSAMKLLWLMENV 156