Jatropha Genome Database

JcCA0277701.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0277701.10 - phase: 0 /pseudo/partial
         (465 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g086690.1 hypothetical protein chr01_pseudomolecule_I...   238   5e-63
IMGA|Medtr1g086690.2 hypothetical protein chr01_pseudomolecule_I...   238   5e-63

>IMGA|Medtr1g086690.1 hypothetical protein
           chr01_pseudomolecule_IMGAG_V3 17229485-17234741 E
           EGN_Mt090430 20090702
          Length = 673

 Score =  238 bits (607), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 129/235 (54%), Positives = 155/235 (65%), Gaps = 1/235 (0%)

Query: 148 IDSCKTL-KSNEDIRIDFLEDIVEAAKNNKKTLFLAMESSMNMMRQVXXXXXXXXXXXXX 206
           ID   TL K N    ID LE+ ++ AK NKKTLF +MES +N+MR+V             
Sbjct: 366 IDENTTLSKYNPACSIDMLEETIDEAKTNKKTLFSSMESLINLMREVEHQEKLAEQANIA 425

Query: 207 XXSAGLDILKKVEELEQMLRHAKEANDMHAGEIYGEKAILATEVRELQGRLLSLSDERDK 266
             + G DIL +VEE + ML HAKEANDMHAGEIYGEKAILATE++ELQ RL SLS ERD+
Sbjct: 426 ATTGGFDILDRVEEYQAMLVHAKEANDMHAGEIYGEKAILATELKELQSRLSSLSGERDE 485

Query: 267 ALAILDEMNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIMDKVVQESKILQR 326
           +LAILDEM Q                                    +M+KVVQES+ LQ+
Sbjct: 486 SLAILDEMRQSLESRLAAADMLRKAAELEKLEKEESARAALLEQEAMMEKVVQESRRLQQ 545

Query: 327 QAEENSKLREFLVDRGHVVDTLQGEISVICQDVRLLKERFDENVPLSKSISSTQT 381
           +AEENSKLREFL+DRG VVDTLQGEISVICQD+RLLKE+FD N+PLSKS +++QT
Sbjct: 546 EAEENSKLREFLMDRGQVVDTLQGEISVICQDIRLLKEKFDANLPLSKSFTASQT 600


>IMGA|Medtr1g086690.2 hypothetical protein
           chr01_pseudomolecule_IMGAG_V3 17229485-17234741 E
           EGN_Mt090430 20090702
          Length = 397

 Score =  238 bits (606), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 129/235 (54%), Positives = 155/235 (65%), Gaps = 1/235 (0%)

Query: 148 IDSCKTL-KSNEDIRIDFLEDIVEAAKNNKKTLFLAMESSMNMMRQVXXXXXXXXXXXXX 206
           ID   TL K N    ID LE+ ++ AK NKKTLF +MES +N+MR+V             
Sbjct: 90  IDENTTLSKYNPACSIDMLEETIDEAKTNKKTLFSSMESLINLMREVEHQEKLAEQANIA 149

Query: 207 XXSAGLDILKKVEELEQMLRHAKEANDMHAGEIYGEKAILATEVRELQGRLLSLSDERDK 266
             + G DIL +VEE + ML HAKEANDMHAGEIYGEKAILATE++ELQ RL SLS ERD+
Sbjct: 150 ATTGGFDILDRVEEYQAMLVHAKEANDMHAGEIYGEKAILATELKELQSRLSSLSGERDE 209

Query: 267 ALAILDEMNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIMDKVVQESKILQR 326
           +LAILDEM Q                                    +M+KVVQES+ LQ+
Sbjct: 210 SLAILDEMRQSLESRLAAADMLRKAAELEKLEKEESARAALLEQEAMMEKVVQESRRLQQ 269

Query: 327 QAEENSKLREFLVDRGHVVDTLQGEISVICQDVRLLKERFDENVPLSKSISSTQT 381
           +AEENSKLREFL+DRG VVDTLQGEISVICQD+RLLKE+FD N+PLSKS +++QT
Sbjct: 270 EAEENSKLREFLMDRGQVVDTLQGEISVICQDIRLLKEKFDANLPLSKSFTASQT 324