Jatropha Genome Database

JcCA0274511.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0274511.10 + phase: 0 /partial
         (121 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g139670.1 Eukaryotic glutathione synthase; Eukaryotic...   171   1e-43
IMGA|Medtr7g139660.1 Eukaryotic glutathione synthase; Eukaryotic...   161   9e-41
IMGA|Medtr6g046600.1 Cyclin-like F-box; Eukaryotic glutathione s...    52   6e-08
IMGA|Medtr6g046500.1 Cyclin-like F-box; Eukaryotic glutathione s...    52   6e-08

>IMGA|Medtr7g139670.1 Eukaryotic glutathione synthase; Eukaryotic
           glutathione synthase, ATP-binding;
           chr07_pseudomolecule_IMGAG_V3 33468246-33473133 E
           EGN_Mt090430 20090702
          Length = 564

 Score =  171 bits (432), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 76/105 (72%), Positives = 96/105 (91%)

Query: 17  GNNIYGDDVKENLLRLQREGSEEDAAYILMQRIFPAVSPALLVRNGICHKDHAISELGIY 76
           GNNIYGD V++ L++LQ+ GS+EDAAYILMQRIFP +S A+L+RNG CHKDHAISELGI+
Sbjct: 460 GNNIYGDAVRDTLIKLQKTGSQEDAAYILMQRIFPNISAAVLMRNGGCHKDHAISELGIF 519

Query: 77  SAYLRNKDKVIINDKSGYLVRTKVASSNEGGVAAGFAVLDSVYLN 121
             YLRNKD+V++N++SGYL+RTK++SS+EGGVAAGFAV+DSVYL 
Sbjct: 520 GTYLRNKDRVVMNNQSGYLMRTKISSSDEGGVAAGFAVIDSVYLT 564


>IMGA|Medtr7g139660.1 Eukaryotic glutathione synthase; Eukaryotic
           glutathione synthase, ATP-binding;
           chr07_pseudomolecule_IMGAG_V3 33459936-33466141 E
           EGN_Mt090430 20090702
          Length = 552

 Score =  161 bits (407), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 73/105 (69%), Positives = 89/105 (84%)

Query: 17  GNNIYGDDVKENLLRLQREGSEEDAAYILMQRIFPAVSPALLVRNGICHKDHAISELGIY 76
           GNNIYGDD++E L RLQ+ GS+EDAAYILMQRIFPA + ++L+RNG  HKDH ISE GI+
Sbjct: 448 GNNIYGDDLRETLKRLQKPGSQEDAAYILMQRIFPANTASILMRNGFLHKDHVISEFGIF 507

Query: 77  SAYLRNKDKVIINDKSGYLVRTKVASSNEGGVAAGFAVLDSVYLN 121
           S YLRNKDKVI+N++SGY+VRTK + S+EGGV  GF V+DSVYL 
Sbjct: 508 STYLRNKDKVIVNNESGYMVRTKPSLSDEGGVLPGFGVIDSVYLT 552


>IMGA|Medtr6g046600.1 Cyclin-like F-box; Eukaryotic glutathione
           synthase, ATP-binding; F-box protein interaction domain
           chr06_pseudomolecule_IMGAG_V3 9889362-9886906 E
           EGN_Mt090430 20090702
          Length = 458

 Score = 52.4 bits (124), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 24/50 (48%), Positives = 33/50 (66%)

Query: 61  NGICHKDHAISELGIYSAYLRNKDKVIINDKSGYLVRTKVASSNEGGVAA 110
           NG  HK H IS+ GI+S YL++KD V+ N++SG ++RTK   S    V A
Sbjct: 390 NGFLHKYHVISDYGIFSTYLKDKDNVVENNESGNMIRTKPKPSLSAEVGA 439


>IMGA|Medtr6g046500.1 Cyclin-like F-box; Eukaryotic glutathione
           synthase, ATP-binding; F-box protein interaction domain
           chr06_pseudomolecule_IMGAG_V3 9788135-9790591 E
           EGN_Mt090430 20090702
          Length = 458

 Score = 52.4 bits (124), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 24/50 (48%), Positives = 33/50 (66%)

Query: 61  NGICHKDHAISELGIYSAYLRNKDKVIINDKSGYLVRTKVASSNEGGVAA 110
           NG  HK H IS+ GI+S YL++KD V+ N++SG ++RTK   S    V A
Sbjct: 390 NGFLHKYHVISDYGIFSTYLKDKDNVVENNESGNMIRTKPKPSLSAEVGA 439