Jatropha Genome Database

JcCA0273951.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0273951.10 - phase: 1 /partial
         (270 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g094050.1 N-(5phosphoribosyl)anthranilate isomerase (...   322   1e-88

>IMGA|Medtr3g094050.1 N-(5phosphoribosyl)anthranilate isomerase
           (PRAI) chr03_pseudomolecule_IMGAG_V3 22478777-22481658 E
           EGN_Mt090430 20090702
          Length = 275

 Score =  322 bits (825), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 163/270 (60%), Positives = 199/270 (73%), Gaps = 3/270 (1%)

Query: 3   TGNHLQPKFVNLQTGHVSGRKMGKIYLA--RLGHSKKRTACKFSPSEKVTFAHEEHEKNW 60
           TG++L+ +  N     + G +  K+  +  R G  K   +CK +    V+ + +E EK  
Sbjct: 7   TGSYLELRATNFHKRPIPGLRGNKLQFSSIRFG-PKYEVSCKLTELANVSCSSKEPEKIK 65

Query: 61  PLVKMCXXXXXXXXXXXXXXXXXXXXMIIWPNSKRSISLSVAKEISKVARSYGAKPVGVF 120
           PLVKMC                    MI+WPNSKRS+SLSVAKEISKVAR YGA+PVGVF
Sbjct: 66  PLVKMCGITSAKDAAMAAEAGANFIGMIVWPNSKRSVSLSVAKEISKVARDYGAEPVGVF 125

Query: 121 VDDDTDTILRAADACDLEFVQLHGTGSRAAFPDLVKEKQVIYVLHANADGNLINQISDED 180
           VDDD +TILRA+DA +LEFVQLHG+GSRAAFP L++E +VIYVLHANADG+L+N I DE+
Sbjct: 126 VDDDAETILRASDASNLEFVQLHGSGSRAAFPSLIQESRVIYVLHANADGSLLNTIPDEE 185

Query: 181 CSMVDWVLVDSATGGSGKGFNWAQFKLPPIRSKHGWLLAGGIHSENVCEALSILKPHGVD 240
           C +VDWVLVDSA GGSG+ F+WAQFKLP IRSK+GWLLAGG++ ENV EALS LKP GVD
Sbjct: 186 CPLVDWVLVDSAKGGSGEAFDWAQFKLPKIRSKYGWLLAGGVNPENVGEALSSLKPGGVD 245

Query: 241 VSSGICDSDGIKKDQSQISSLMYAVRSVRY 270
           VSSGIC SDGI+KDQS+I+S M AV SV+Y
Sbjct: 246 VSSGICASDGIQKDQSRIASFMDAVHSVQY 275