Jatropha Genome Database

JcCA0273631.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0273631.30 - phase: 1 /partial
         (66 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g079070.1 Zinc finger, C2H2-type chr01_pseudomolecule...   105   4e-24
IMGA|Medtr7g121290.1 Zinc finger, C2H2-type chr07_pseudomolecule...   105   5e-24
IMGA|Medtr8g093600.1 Zinc finger, C2H2-type chr08_pseudomolecule...   103   2e-23
IMGA|Medtr1g083730.1 Zinc finger, C2H2-type chr01_pseudomolecule...   102   6e-23
IMGA|Medtr8g093600.2 Zinc finger, C2H2-type chr08_pseudomolecule...   101   8e-23
IMGA|Medtr2g121160.1 Zinc finger, C2H2-type chr02_pseudomolecule...   101   1e-22
IMGA|Medtr1g099650.1 Zinc finger, C2H2-type chr01_pseudomolecule...   101   1e-22
IMGA|Medtr7g130150.1 Zinc finger, C2H2-type chr07_pseudomolecule...   100   2e-22
IMGA|AC235673_1.1 Zinc finger, C2H2-type AC235673.1 2141-1 E EGN...   100   3e-22
IMGA|Medtr8g018830.1 Zinc finger, C2H2-type chr08_pseudomolecule...    99   4e-22
IMGA|Medtr1g039670.1 Zinc finger, C2H2-type chr01_pseudomolecule...    98   1e-21
IMGA|Medtr1g020100.1 Zinc finger, C2H2-type chr01_pseudomolecule...    98   1e-21
IMGA|Medtr2g110650.1 Zinc finger, C2H2-type chr02_pseudomolecule...    96   6e-21
IMGA|Medtr2g021320.1 Zinc finger, C2H2-type chr02_pseudomolecule...    93   4e-20
IMGA|Medtr8g012380.1 ATIDD12 ; nucleic acid binding, putative ch...    80   3e-16
IMGA|Medtr8g012470.1 TIR chr08_pseudomolecule_IMGAG_V3 1992070-1...    79   5e-16
IMGA|Medtr4g081300.1 Zinc finger, C2H2-type chr04_pseudomolecule...    78   1e-15
IMGA|Medtr4g108660.1 No apical meristem (NAM) protein; Zinc fing...    72   6e-14
IMGA|Medtr1g146130.1 Zinc finger, C2H2-type chr01_pseudomolecule...    59   5e-10
IMGA|Medtr3g101820.1 Zinc finger, C2H2-type chr03_pseudomolecule...    49   5e-07

>IMGA|Medtr1g079070.1 Zinc finger, C2H2-type
          chr01_pseudomolecule_IMGAG_V3 15759586-15762413 E
          EGN_Mt090430 20090702
          Length = 569

 Score =  105 bits (263), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 46/48 (95%), Positives = 48/48 (100%)

Query: 1  DPDAEVMALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 48
          DPDAEV+ALSPKTLMATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKL
Sbjct: 48 DPDAEVIALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKL 95


>IMGA|Medtr7g121290.1 Zinc finger, C2H2-type
          chr07_pseudomolecule_IMGAG_V3 28520698-28522529 E
          EGN_Mt090430 20090702
          Length = 406

 Score =  105 bits (262), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 47/48 (97%), Positives = 48/48 (100%)

Query: 1  DPDAEVMALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 48
          DPDAEV+ALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL
Sbjct: 44 DPDAEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 91


>IMGA|Medtr8g093600.1 Zinc finger, C2H2-type
          chr08_pseudomolecule_IMGAG_V3 20629417-20632618 F
          EGN_Mt090430 20090702
          Length = 519

 Score =  103 bits (258), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 44/48 (91%), Positives = 47/48 (97%)

Query: 1  DPDAEVMALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 48
          DP+AEV+ALSP TL+ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL
Sbjct: 43 DPEAEVIALSPTTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 90


>IMGA|Medtr1g083730.1 Zinc finger, C2H2-type
          chr01_pseudomolecule_IMGAG_V3 16614962-16613302 E
          EGN_Mt090430 20090702
          Length = 212

 Score =  102 bits (253), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 45/48 (93%), Positives = 47/48 (97%)

Query: 1  DPDAEVMALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 48
          DPDAEV+ALSPKTL+ TNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL
Sbjct: 50 DPDAEVIALSPKTLLTTNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 97


>IMGA|Medtr8g093600.2 Zinc finger, C2H2-type
          chr08_pseudomolecule_IMGAG_V3 20629417-20632618 F
          EGN_Mt090430 20090702
          Length = 517

 Score =  101 bits (252), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 43/47 (91%), Positives = 46/47 (97%)

Query: 2  PDAEVMALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 48
          P+AEV+ALSP TL+ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL
Sbjct: 42 PEAEVIALSPTTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 88


>IMGA|Medtr2g121160.1 Zinc finger, C2H2-type
           chr02_pseudomolecule_IMGAG_V3 28680568-28682244 E
           EGN_Mt090430 20090702
          Length = 220

 Score =  101 bits (251), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 44/48 (91%), Positives = 47/48 (97%)

Query: 1   DPDAEVMALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 48
           DP AEV+ALSPKTLMATNRF+CEICNKGFQRDQNLQLH+RGHNLPWKL
Sbjct: 56  DPQAEVIALSPKTLMATNRFICEICNKGFQRDQNLQLHKRGHNLPWKL 103


>IMGA|Medtr1g099650.1 Zinc finger, C2H2-type
           chr01_pseudomolecule_IMGAG_V3 20449956-20453836 E
           EGN_Mt090430 20090702
          Length = 530

 Score =  101 bits (251), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 45/48 (93%), Positives = 46/48 (95%)

Query: 1   DPDAEVMALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 48
           DP AEV+ALSP TLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL
Sbjct: 73  DPSAEVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 120


>IMGA|Medtr7g130150.1 Zinc finger, C2H2-type
           chr07_pseudomolecule_IMGAG_V3 30366409-30363069 E
           EGN_Mt090430 20090702
          Length = 537

 Score =  100 bits (248), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/48 (91%), Positives = 46/48 (95%)

Query: 1   DPDAEVMALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 48
           +P AEV+ALSP TLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL
Sbjct: 79  NPTAEVVALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 126


>IMGA|AC235673_1.1 Zinc finger, C2H2-type AC235673.1 2141-1 E
          EGN_Mt090430 20090702
          Length = 353

 Score = 99.8 bits (247), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 42/48 (87%), Positives = 48/48 (100%)

Query: 1  DPDAEVMALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 48
          DP++EV+A+SPK+LMATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKL
Sbjct: 35 DPESEVVAMSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKL 82


>IMGA|Medtr8g018830.1 Zinc finger, C2H2-type
           chr08_pseudomolecule_IMGAG_V3 3503403-3500493 E
           EGN_Mt090430 20090702
          Length = 517

 Score = 99.4 bits (246), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 42/48 (87%), Positives = 47/48 (97%)

Query: 1   DPDAEVMALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 48
           DPDAEV+A+SPK+L+A NRF+CEICNKGFQRDQNLQLHRRGHNLPWKL
Sbjct: 72  DPDAEVIAMSPKSLLAKNRFICEICNKGFQRDQNLQLHRRGHNLPWKL 119


>IMGA|Medtr1g039670.1 Zinc finger, C2H2-type
           chr01_pseudomolecule_IMGAG_V3 9107055-9112031 E
           EGN_Mt090430 20090702
          Length = 448

 Score = 97.8 bits (242), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 42/47 (89%), Positives = 46/47 (97%)

Query: 2   PDAEVMALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 48
           PDAEV+ALSPK+LMATNRFVCE+C KGFQR+QNLQLHRRGHNLPWKL
Sbjct: 55  PDAEVIALSPKSLMATNRFVCEVCQKGFQREQNLQLHRRGHNLPWKL 101


>IMGA|Medtr1g020100.1 Zinc finger, C2H2-type
          chr01_pseudomolecule_IMGAG_V3 4318809-4322641 E
          EGN_Mt090430 20090702
          Length = 460

 Score = 97.8 bits (242), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 41/48 (85%), Positives = 48/48 (100%)

Query: 1  DPDAEVMALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 48
          DP+A+V+ALSP+TL+ATNRF+CEICNKGFQRDQNLQLH+RGHNLPWKL
Sbjct: 41 DPEAQVLALSPQTLLATNRFICEICNKGFQRDQNLQLHKRGHNLPWKL 88


>IMGA|Medtr2g110650.1 Zinc finger, C2H2-type
          chr02_pseudomolecule_IMGAG_V3 26089717-26087633 E
          EGN_Mt090430 20090702
          Length = 408

 Score = 95.5 bits (236), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 39/48 (81%), Positives = 47/48 (97%)

Query: 1  DPDAEVMALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 48
          +PD+EV+ALSPK+LM +NRF+CE+CNKGF+RDQNLQLHRRGHNLPWKL
Sbjct: 36 NPDSEVIALSPKSLMTSNRFICEVCNKGFKRDQNLQLHRRGHNLPWKL 83


>IMGA|Medtr2g021320.1 Zinc finger, C2H2-type
          chr02_pseudomolecule_IMGAG_V3 5409292-5410519 E
          EGN_Mt090430 20090702
          Length = 122

 Score = 92.8 bits (229), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 42/48 (87%), Positives = 45/48 (93%)

Query: 1  DPDAEVMALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 48
          DP+AEV++LSPK LMATNRFVCEIC K FQRDQNLQLHRRGHNLPWKL
Sbjct: 13 DPEAEVISLSPKPLMATNRFVCEICLKDFQRDQNLQLHRRGHNLPWKL 60


>IMGA|Medtr8g012380.1 ATIDD12 ; nucleic acid binding, putative
          chr08_pseudomolecule_IMGAG_V3 1950516-1949781 H
          EGN_Mt090430 20090702
          Length = 99

 Score = 79.7 bits (195), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 35/45 (77%), Positives = 41/45 (91%)

Query: 1  DPDAEVMALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLP 45
          DP+A+V++LSPK LMATNRFVCEIC K FQRDQNLQ +RRG+NLP
Sbjct: 55 DPEAKVISLSPKPLMATNRFVCEICLKDFQRDQNLQFYRRGYNLP 99


>IMGA|Medtr8g012470.1 TIR chr08_pseudomolecule_IMGAG_V3
           1992070-1991377 H EGN_Mt090430 20090702
          Length = 103

 Score = 79.0 bits (193), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 35/45 (77%), Positives = 41/45 (91%)

Query: 1   DPDAEVMALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLP 45
           DP+A+V++LSPK LMATNRFVCEIC K FQRDQNLQ +RRG+NLP
Sbjct: 59  DPEAKVISLSPKPLMATNRFVCEICLKDFQRDQNLQFYRRGYNLP 103


>IMGA|Medtr4g081300.1 Zinc finger, C2H2-type
          chr04_pseudomolecule_IMGAG_V3 16950631-16952784 E
          EGN_Mt090430 20090702
          Length = 448

 Score = 77.8 bits (190), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 33/34 (97%), Positives = 34/34 (100%)

Query: 15 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 48
          MATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKL
Sbjct: 1  MATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKL 34


>IMGA|Medtr4g108660.1 No apical meristem (NAM) protein; Zinc
          finger, C2H2-type chr04_pseudomolecule_IMGAG_V3
          24130217-24132975 E EGN_Mt090430 20090702
          Length = 177

 Score = 72.0 bits (175), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 31/34 (91%), Positives = 32/34 (94%)

Query: 15 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 48
          MATNRF+CE C KGFQRDQNLQLHRRGHNLPWKL
Sbjct: 1  MATNRFLCETCGKGFQRDQNLQLHRRGHNLPWKL 34


>IMGA|Medtr1g146130.1 Zinc finger, C2H2-type
          chr01_pseudomolecule_IMGAG_V3 32214961-32214692 H
          EGN_Mt090430 20090702
          Length = 89

 Score = 59.3 bits (142), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 26/31 (83%), Positives = 28/31 (90%)

Query: 15 MATNRFVCEICNKGFQRDQNLQLHRRGHNLP 45
          MAT+RFVCEIC K FQRDQNLQLHRR +NLP
Sbjct: 1  MATSRFVCEICLKDFQRDQNLQLHRRRYNLP 31


>IMGA|Medtr3g101820.1 Zinc finger, C2H2-type
           chr03_pseudomolecule_IMGAG_V3 24704745-24705930 E
           EGN_Mt090430 20090702
          Length = 324

 Score = 48.9 bits (115), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 32/52 (61%)

Query: 1   DPDAEVMALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLLDSL 52
           D D E++ L    L+A +   CEIC KGF+RD NL++H R H   +K  ++L
Sbjct: 109 DSDCEIVELDAMELLAEHLHFCEICGKGFKRDANLRMHMRAHGNQFKTPEAL 160