Jatropha Genome Database

JcCA0273631.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0273631.10 - phase: 0 
         (272 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|AC233675_14.1 Glucosidase 2 subunit beta precursor, related...   183   8e-47
IMGA|Medtr4g109280.1 Glucosidase 2 subunit beta precursor, relat...   183   8e-47
IMGA|Medtr4g115150.1 Glucosidase II beta subunit-like chr04_pseu...   160   6e-40

>IMGA|AC233675_14.1 Glucosidase 2 subunit beta precursor, related
           AC233675.1 72073-74269 E EGN_Mt090430 20090702
          Length = 225

 Score =  183 bits (464), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 87/124 (70%), Positives = 94/124 (75%), Gaps = 4/124 (3%)

Query: 17  FFIAFYFLVPSAH----SKAPLIGVHPLDEKYFSSRLIKCKDGSKSFPRDSLNDNFCDCV 72
           F      LV +A     S    +GVHPLD +Y+SS  IKCKDGSKSF RD LND+FCDC 
Sbjct: 6   FHSVLLLLVSTASCLSFSHPSFLGVHPLDAQYYSSEFIKCKDGSKSFSRDRLNDDFCDCS 65

Query: 73  DGTDEPGTSACPRGKFYCQNLGSKPQFIFSSHVNDRICDCCDGSDEYDSGINCPNTCIMG 132
           DGTDEPGTSAC  GKFYC+NLGSKPQFI SSHVNDR CDCCDGSDEYD  I CPNTC+MG
Sbjct: 66  DGTDEPGTSACSAGKFYCRNLGSKPQFIVSSHVNDRFCDCCDGSDEYDGTIRCPNTCVMG 125

Query: 133 GNLE 136
           GN E
Sbjct: 126 GNAE 129


>IMGA|Medtr4g109280.1 Glucosidase 2 subunit beta precursor, related
           chr04_pseudomolecule_IMGAG_V3 24415400-24417554 E
           EGN_Mt090430 20090702
          Length = 225

 Score =  183 bits (464), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 87/124 (70%), Positives = 94/124 (75%), Gaps = 4/124 (3%)

Query: 17  FFIAFYFLVPSAH----SKAPLIGVHPLDEKYFSSRLIKCKDGSKSFPRDSLNDNFCDCV 72
           F      LV +A     S    +GVHPLD +Y+SS  IKCKDGSKSF RD LND+FCDC 
Sbjct: 6   FHSVLLLLVSTASCLSFSHPSFLGVHPLDAQYYSSEFIKCKDGSKSFSRDRLNDDFCDCS 65

Query: 73  DGTDEPGTSACPRGKFYCQNLGSKPQFIFSSHVNDRICDCCDGSDEYDSGINCPNTCIMG 132
           DGTDEPGTSAC  GKFYC+NLGSKPQFI SSHVNDR CDCCDGSDEYD  I CPNTC+MG
Sbjct: 66  DGTDEPGTSACSAGKFYCRNLGSKPQFIVSSHVNDRFCDCCDGSDEYDGTIRCPNTCVMG 125

Query: 133 GNLE 136
           GN E
Sbjct: 126 GNAE 129


>IMGA|Medtr4g115150.1 Glucosidase II beta subunit-like
           chr04_pseudomolecule_IMGAG_V3 26576267-26583571 E
           EGN_Mt090430 20090702
          Length = 644

 Score =  160 bits (405), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 77/137 (56%), Positives = 92/137 (67%), Gaps = 4/137 (2%)

Query: 14  LFTFFIAFYFLVP---SAHSKAPLIGVHPLDEKYF-SSRLIKCKDGSKSFPRDSLNDNFC 69
           +F   +   FL P   S+  K P +G+ P DEKY+ SS +I+CKDGS +F +D LND+FC
Sbjct: 7   IFLIPLLLVFLAPLSSSSKPKDPFLGIAPQDEKYYKSSDVIRCKDGSANFNKDQLNDDFC 66

Query: 70  DCVDGTDEPGTSACPRGKFYCQNLGSKPQFIFSSHVNDRICDCCDGSDEYDSGINCPNTC 129
           DC DGTDEPGTSACPRGKFYC+N G  P ++FSS VND ICDCCDGSDEYD    C NTC
Sbjct: 67  DCPDGTDEPGTSACPRGKFYCRNAGHSPLYLFSSRVNDGICDCCDGSDEYDGKAKCSNTC 126

Query: 130 IMGGNLEYKARRFISAT 146
              G    +  R   AT
Sbjct: 127 WEAGKAAREKLRKKIAT 143