Jatropha Genome Database

JcCA0269951.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0269951.10 + phase: 0 /partial
         (50 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g034760.1 Protein of unknown function DUF89 chr07_pse...    61   1e-10
IMGA|Medtr7g034770.1 Protein of unknown function DUF89 chr07_pse...    60   2e-10
IMGA|Medtr6g069730.2 Protein of unknown function DUF89 chr06_pse...    60   2e-10
IMGA|Medtr3g113960.1 Eukaryotic pantothenate kinase chr03_pseudo...    58   1e-09

>IMGA|Medtr7g034760.1 Protein of unknown function DUF89
           chr07_pseudomolecule_IMGAG_V3 8352606-8356264 E
           EGN_Mt090430 20090702
          Length = 369

 Score = 61.2 bits (147), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/29 (93%), Positives = 29/29 (100%)

Query: 2   VIFVDNSGADIILGILPFARELLRRGTQV 30
           +IFVDNSGADIILGILPFARELLRRG+QV
Sbjct: 220 IIFVDNSGADIILGILPFARELLRRGSQV 248


>IMGA|Medtr7g034770.1 Protein of unknown function DUF89
           chr07_pseudomolecule_IMGAG_V3 8360789-8366214 H
           EGN_Mt090430 20090702
          Length = 370

 Score = 60.5 bits (145), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/29 (93%), Positives = 28/29 (96%)

Query: 2   VIFVDNSGADIILGILPFARELLRRGTQV 30
           +IFVDNSGADIILGILPFARELLRRG QV
Sbjct: 221 IIFVDNSGADIILGILPFARELLRRGNQV 249


>IMGA|Medtr6g069730.2 Protein of unknown function DUF89
          chr06_pseudomolecule_IMGAG_V3 12965534-12969084 E
          EGN_Mt090430 20090702
          Length = 181

 Score = 60.1 bits (144), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/29 (93%), Positives = 29/29 (100%)

Query: 2  VIFVDNSGADIILGILPFARELLRRGTQV 30
          +IFVDNSGADIILGILPFARELLRRG+QV
Sbjct: 26 IIFVDNSGADIILGILPFARELLRRGSQV 54


>IMGA|Medtr3g113960.1 Eukaryotic pantothenate kinase
           chr03_pseudomolecule_IMGAG_V3 28749151-28738871 E
           EGN_Mt090430 20090702
          Length = 899

 Score = 58.2 bits (139), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/34 (70%), Positives = 31/34 (91%)

Query: 1   AVIFVDNSGADIILGILPFARELLRRGTQVCFIS 34
           A++FVDNSGADI+LG+LP ARELLRRGT+V  ++
Sbjct: 726 ALLFVDNSGADIVLGMLPLARELLRRGTEVVLVA 759