Jatropha Genome Database

JcCA0265621.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0265621.10 - phase: 0 /partial
         (162 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g108180.1 NAD-dependent glycerol-3-phosphate dehydrog...   304   2e-83
IMGA|Medtr4g118340.1 NAD-dependent glycerol-3-phosphate dehydrog...   289   3e-79

>IMGA|Medtr7g108180.1 NAD-dependent glycerol-3-phosphate
           dehydrogenase, C-terminal chr07_pseudomolecule_IMGAG_V3
           25430587-25433755 E EGN_Mt090430 20090702
          Length = 457

 Score =  304 bits (778), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 148/161 (91%), Positives = 154/161 (95%)

Query: 1   ESATSKSVYFAHCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGEL 60
           ESATSKSVYFAHCTSEMIFITHLL EEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGEL
Sbjct: 296 ESATSKSVYFAHCTSEMIFITHLLTEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGEL 355

Query: 61  NRDMGDSISGKGMIQGVSAVKAFYELLSQPSLNVLHPDEKKPVAPVELCPILKTLYKILI 120
           + DMGDSISGKGMIQGVSAV+AF+ELLSQ SLNVLHP+EKK VAPVELCPILKTLYKILI
Sbjct: 356 SPDMGDSISGKGMIQGVSAVEAFFELLSQSSLNVLHPEEKKHVAPVELCPILKTLYKILI 415

Query: 121 SREHSSQAILQALRDENLNDPRERIEIAQSHAFYRPSLLGQ 161
           SRE S+ AIL+ALRDENLNDPRERI IAQSHAFYRPSLLGQ
Sbjct: 416 SREQSTHAILKALRDENLNDPRERIAIAQSHAFYRPSLLGQ 456


>IMGA|Medtr4g118340.1 NAD-dependent glycerol-3-phosphate
           dehydrogenase chr04_pseudomolecule_IMGAG_V3
           27487037-27483447 E EGN_Mt090430 20090702
          Length = 458

 Score =  289 bits (740), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 142/161 (88%), Positives = 149/161 (92%)

Query: 1   ESATSKSVYFAHCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGEL 60
           ESATSKSVYFAHCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQ LAKGEL
Sbjct: 296 ESATSKSVYFAHCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQKLAKGEL 355

Query: 61  NRDMGDSISGKGMIQGVSAVKAFYELLSQPSLNVLHPDEKKPVAPVELCPILKTLYKILI 120
           + +MGDSI GKGMIQGVSAVKAFYELLSQ SLNVL P+EKK VAPVELCPILK LYKILI
Sbjct: 356 SLEMGDSIKGKGMIQGVSAVKAFYELLSQSSLNVLDPEEKKHVAPVELCPILKMLYKILI 415

Query: 121 SREHSSQAILQALRDENLNDPRERIEIAQSHAFYRPSLLGQ 161
            RE+  QAILQALRDE +NDPR+RI+IAQSH FYRPSLLGQ
Sbjct: 416 LREYPVQAILQALRDETMNDPRDRIKIAQSHVFYRPSLLGQ 456