Jatropha Genome Database

JcCA0265541.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0265541.10 + phase: 1 /pseudo/partial
         (159 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g120680.1 Pyridoxal-5-phosphate-dependent enzyme, bet...   236   3e-63

>IMGA|Medtr2g120680.1 Pyridoxal-5-phosphate-dependent enzyme, beta
           subunit chr02_pseudomolecule_IMGAG_V3 28446316-28448239
           E EGN_Mt090430 20090702
          Length = 532

 Score =  236 bits (602), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 113/133 (84%), Positives = 121/133 (90%)

Query: 27  FASAIQIGDPVSIDRAVYALKNSNGIVEEATEEELMDAMAQADSTGMFICPHTGVALTAL 86
           FASAIQIGDPVSIDRAV+ALKN NGIVEEATEEELMDAMAQADSTGMF CPHTGVALTAL
Sbjct: 398 FASAIQIGDPVSIDRAVHALKNCNGIVEEATEEELMDAMAQADSTGMFTCPHTGVALTAL 457

Query: 87  NKLRNSGVIGPMDRTVVVSTAHGLKFTQSKIDYHSKAIPDMACRFANPPVQVKAEFGAVM 146
            KLRNSGVI P DRTVVVSTAHGLKFTQSKIDYHSK I D+AC+FANPP QVKA+FG+VM
Sbjct: 458 FKLRNSGVIKPTDRTVVVSTAHGLKFTQSKIDYHSKGIKDLACQFANPPTQVKADFGSVM 517

Query: 147 DVLKNFLGNRVPK 159
           DVL  +L ++ PK
Sbjct: 518 DVLSKYLQSKAPK 530