Jatropha Genome Database

JcCA0262721.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0262721.10 + phase: 2 /partial
         (539 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g110990.1 5-methyltetrahydropteroyltriglutamate--homo...   938   0.0  
IMGA|Medtr7g103050.2 5-methyltetrahydropteroyltriglutamate--homo...   905   0.0  
IMGA|Medtr7g103050.1 5-methyltetrahydropteroyltriglutamate--homo...   904   0.0  
IMGA|Medtr7g103050.3 Methionine synthase, vitamin-B12 independen...   752   0.0  
IMGA|Medtr1g007480.1 5-methyltetrahydropteroyltriglutamate--homo...   253   2e-67
IMGA|Medtr7g103050.4 Methionine synthase, vitamin-B12 independen...   232   4e-61

>IMGA|Medtr3g110990.1
           5-methyltetrahydropteroyltriglutamate--homocysteine
           S-methyltransferase chr03_pseudomolecule_IMGAG_V3
           28043141-28037951 E EGN_Mt090430 20090702
          Length = 813

 Score =  938 bits (2425), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 450/539 (83%), Positives = 484/539 (89%)

Query: 1   HFIVPELGPDVKFSYASHKAVTEYKEAKALGIDTVPVLVGPVSYLLLSKPAKGVEKTFSL 60
           HFIVPELGPDVKFSYASHKAV EY EAKALG++TVPVLVGPVSYLLLSKPAKGVEK+FSL
Sbjct: 166 HFIVPELGPDVKFSYASHKAVDEYNEAKALGVNTVPVLVGPVSYLLLSKPAKGVEKSFSL 225

Query: 61  LSLLGKILPVYKEVISELKEAGASWIQFDEPTLVMDLDSHKLQAFTDAYSELESTLSGLN 120
           LSL+ KILPVYKEV++ELK AGA+WIQFDEPTLV DLD+H+LQAF  AY+ELESTLSGLN
Sbjct: 226 LSLIDKILPVYKEVVTELKTAGATWIQFDEPTLVKDLDAHQLQAFNYAYAELESTLSGLN 285

Query: 121 VVVETYFADVPAEAFKTLTSLKGVTGYGFDLVRGTKTLDLIKSDFPKGKYLFAGVVDGRN 180
           V+VETYFADVPAEA+KTLTSLK VT YGFDLVRGTKTLDLIK  FP GK LFAG+VDGRN
Sbjct: 286 VLVETYFADVPAEAYKTLTSLKAVTAYGFDLVRGTKTLDLIKQGFPSGKLLFAGIVDGRN 345

Query: 181 IWANDLASSLSTLQELEGIVGKDKXXXXXXXXXXHTAVDLVNETKLDQEIKSWLAFAAQK 240
           IWAN+L SSL+TL+EL  IVGK+K          HTAVDLVNETKLDQEIKSWLAFAAQK
Sbjct: 346 IWANNLESSLNTLKELGDIVGKEKVVVSTSCSLLHTAVDLVNETKLDQEIKSWLAFAAQK 405

Query: 241 VVEVNALAKALAGEKDEXXXXXXXXXXXXXXXXPRVTNEAVQKAAAALRGSDHRRATNVS 300
           +VEVNAL+KAL+G+KDE                PRVTNE VQKAAAAL+GSDHRR T+VS
Sbjct: 406 IVEVNALSKALSGQKDEVYFSSNAAALVSRKSSPRVTNEDVQKAAAALKGSDHRRVTSVS 465

Query: 301 ARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYTKAIKAEINKVVKL 360
           +RLDAQQKKLNLP LPTTTIGSFPQT +LRRVRRE+KAKKISEE+Y + IK EIN VVK+
Sbjct: 466 SRLDAQQKKLNLPSLPTTTIGSFPQTADLRRVRREFKAKKISEEDYIRFIKEEINNVVKI 525

Query: 361 QEELDIDVLVHGEPERNDMVEYFGEQLSGFVFTVNGWVQSYGSRCVKPPIIYGDVSRPNP 420
           QEELDIDVLVHGEPERNDMVEYFGEQLSGF FT NGWVQSYGSRCVKPPIIYGDVSRP P
Sbjct: 526 QEELDIDVLVHGEPERNDMVEYFGEQLSGFTFTANGWVQSYGSRCVKPPIIYGDVSRPKP 585

Query: 421 MTVFWSSTAQSMTARPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKA 480
           MTVFWSSTAQS+T RPMKGMLTGPVTILNWSFVR+DQPRFETCYQIALAIKDEVEDLEKA
Sbjct: 586 MTVFWSSTAQSLTKRPMKGMLTGPVTILNWSFVRDDQPRFETCYQIALAIKDEVEDLEKA 645

Query: 481 GINVIQIDEAALREGLPLRKSEQAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDI 539
           GI VIQIDEAALREGLPLRKSE++FYL+WAVHSFRITNCGVQDTTQIHTHMCYSNFNDI
Sbjct: 646 GITVIQIDEAALREGLPLRKSEESFYLNWAVHSFRITNCGVQDTTQIHTHMCYSNFNDI 704


>IMGA|Medtr7g103050.2
           5-methyltetrahydropteroyltriglutamate--homocysteine
           S-methyltransferase chr07_pseudomolecule_IMGAG_V3
           23004854-22999451 E EGN_Mt090430 20090702
          Length = 753

 Score =  905 bits (2338), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 439/539 (81%), Positives = 470/539 (87%)

Query: 1   HFIVPELGPDVKFSYASHKAVTEYKEAKALGIDTVPVLVGPVSYLLLSKPAKGVEKTFSL 60
           HFIVPELGP+V F Y+SHKAV EYKEAKALG+DTVPVLVGPVSYLLLSK AKGV+K+F L
Sbjct: 108 HFIVPELGPEVNFVYSSHKAVEEYKEAKALGVDTVPVLVGPVSYLLLSKAAKGVDKSFDL 167

Query: 61  LSLLGKILPVYKEVISELKEAGASWIQFDEPTLVMDLDSHKLQAFTDAYSELESTLSGLN 120
           LSLL K+L VYKEVI++LK AGA +IQFDEPTLV+DL++HKLQAFTDAY+ L  +  GL+
Sbjct: 168 LSLLPKVLAVYKEVIADLKAAGAQFIQFDEPTLVLDLEAHKLQAFTDAYAALTPSFEGLH 227

Query: 121 VVVETYFADVPAEAFKTLTSLKGVTGYGFDLVRGTKTLDLIKSDFPKGKYLFAGVVDGRN 180
           V+VETYFAD+PAEA+KTLTSL GV  YGFDLVRGTKTLDLIK+ FP GK++FAGVVDGRN
Sbjct: 228 VLVETYFADIPAEAYKTLTSLSGVAAYGFDLVRGTKTLDLIKAGFPSGKWIFAGVVDGRN 287

Query: 181 IWANDLASSLSTLQELEGIVGKDKXXXXXXXXXXHTAVDLVNETKLDQEIKSWLAFAAQK 240
           IWANDL +SLSTL+ L GIVGK++          HTAVDLVNETKLD EIKSWLAFAAQK
Sbjct: 288 IWANDLEASLSTLEALAGIVGKERIVVSTSCSLLHTAVDLVNETKLDDEIKSWLAFAAQK 347

Query: 241 VVEVNALAKALAGEKDEXXXXXXXXXXXXXXXXPRVTNEAVQKAAAALRGSDHRRATNVS 300
           VVEVNALA ALAG KDE                PRVTNEAVQKAAAAL+GSDHRRATNVS
Sbjct: 348 VVEVNALANALAGNKDEAIFSASSAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVS 407

Query: 301 ARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYTKAIKAEINKVVKL 360
           ARLDAQQKKLNLPILPTTTIGSFPQT+ELRRVRRE+KAKKISEEEY KAIK EI  VV+L
Sbjct: 408 ARLDAQQKKLNLPILPTTTIGSFPQTVELRRVRREFKAKKISEEEYIKAIKEEIRSVVEL 467

Query: 361 QEELDIDVLVHGEPERNDMVEYFGEQLSGFVFTVNGWVQSYGSRCVKPPIIYGDVSRPNP 420
           QEELDIDVLVHGEPERNDMVEYFGEQLSGF FT NGWVQSYGSRCVKPPIIYGDVSRP  
Sbjct: 468 QEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKA 527

Query: 421 MTVFWSSTAQSMTARPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKA 480
           MTVFWS+ AQS T RPMKGMLTGPVTILNWSFVR DQPR ETCYQIALAIKDEVEDLEK 
Sbjct: 528 MTVFWSALAQSFTKRPMKGMLTGPVTILNWSFVRVDQPRSETCYQIALAIKDEVEDLEKG 587

Query: 481 GINVIQIDEAALREGLPLRKSEQAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDI 539
           GI VIQIDEAALREGLPLRKSE A YLDWAVHSFRITN GVQD+TQIHTHMCYSNFNDI
Sbjct: 588 GIGVIQIDEAALREGLPLRKSEHAHYLDWAVHSFRITNVGVQDSTQIHTHMCYSNFNDI 646


>IMGA|Medtr7g103050.1
           5-methyltetrahydropteroyltriglutamate--homocysteine
           S-methyltransferase chr07_pseudomolecule_IMGAG_V3
           23004854-22999451 E EGN_Mt090430 20090702
          Length = 763

 Score =  904 bits (2336), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 439/539 (81%), Positives = 470/539 (87%)

Query: 1   HFIVPELGPDVKFSYASHKAVTEYKEAKALGIDTVPVLVGPVSYLLLSKPAKGVEKTFSL 60
           HFIVPELGP+V F Y+SHKAV EYKEAKALG+DTVPVLVGPVSYLLLSK AKGV+K+F L
Sbjct: 118 HFIVPELGPEVNFVYSSHKAVEEYKEAKALGVDTVPVLVGPVSYLLLSKAAKGVDKSFDL 177

Query: 61  LSLLGKILPVYKEVISELKEAGASWIQFDEPTLVMDLDSHKLQAFTDAYSELESTLSGLN 120
           LSLL K+L VYKEVI++LK AGA +IQFDEPTLV+DL++HKLQAFTDAY+ L  +  GL+
Sbjct: 178 LSLLPKVLAVYKEVIADLKAAGAQFIQFDEPTLVLDLEAHKLQAFTDAYAALTPSFEGLH 237

Query: 121 VVVETYFADVPAEAFKTLTSLKGVTGYGFDLVRGTKTLDLIKSDFPKGKYLFAGVVDGRN 180
           V+VETYFAD+PAEA+KTLTSL GV  YGFDLVRGTKTLDLIK+ FP GK++FAGVVDGRN
Sbjct: 238 VLVETYFADIPAEAYKTLTSLSGVAAYGFDLVRGTKTLDLIKAGFPSGKWIFAGVVDGRN 297

Query: 181 IWANDLASSLSTLQELEGIVGKDKXXXXXXXXXXHTAVDLVNETKLDQEIKSWLAFAAQK 240
           IWANDL +SLSTL+ L GIVGK++          HTAVDLVNETKLD EIKSWLAFAAQK
Sbjct: 298 IWANDLEASLSTLEALAGIVGKERIVVSTSCSLLHTAVDLVNETKLDDEIKSWLAFAAQK 357

Query: 241 VVEVNALAKALAGEKDEXXXXXXXXXXXXXXXXPRVTNEAVQKAAAALRGSDHRRATNVS 300
           VVEVNALA ALAG KDE                PRVTNEAVQKAAAAL+GSDHRRATNVS
Sbjct: 358 VVEVNALANALAGNKDEAIFSASSAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVS 417

Query: 301 ARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYTKAIKAEINKVVKL 360
           ARLDAQQKKLNLPILPTTTIGSFPQT+ELRRVRRE+KAKKISEEEY KAIK EI  VV+L
Sbjct: 418 ARLDAQQKKLNLPILPTTTIGSFPQTVELRRVRREFKAKKISEEEYIKAIKEEIRSVVEL 477

Query: 361 QEELDIDVLVHGEPERNDMVEYFGEQLSGFVFTVNGWVQSYGSRCVKPPIIYGDVSRPNP 420
           QEELDIDVLVHGEPERNDMVEYFGEQLSGF FT NGWVQSYGSRCVKPPIIYGDVSRP  
Sbjct: 478 QEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKA 537

Query: 421 MTVFWSSTAQSMTARPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKA 480
           MTVFWS+ AQS T RPMKGMLTGPVTILNWSFVR DQPR ETCYQIALAIKDEVEDLEK 
Sbjct: 538 MTVFWSALAQSFTKRPMKGMLTGPVTILNWSFVRVDQPRSETCYQIALAIKDEVEDLEKG 597

Query: 481 GINVIQIDEAALREGLPLRKSEQAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDI 539
           GI VIQIDEAALREGLPLRKSE A YLDWAVHSFRITN GVQD+TQIHTHMCYSNFNDI
Sbjct: 598 GIGVIQIDEAALREGLPLRKSEHAHYLDWAVHSFRITNVGVQDSTQIHTHMCYSNFNDI 656


>IMGA|Medtr7g103050.3 Methionine synthase, vitamin-B12 independent
           chr07_pseudomolecule_IMGAG_V3 23004854-22999451 E
           EGN_Mt090430 20090702
          Length = 640

 Score =  752 bits (1941), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/489 (75%), Positives = 409/489 (83%), Gaps = 2/489 (0%)

Query: 1   HFIVPELGPDVKFSYASHKAVTEYKEAKALGIDTVPVLVGPVSYLLLSKPAKGVEKTFSL 60
           HFIVPELGP+V F Y+SHKAV EYKEAKALG+DTVPVLVGPVSYLLLSK AKGV+K+F L
Sbjct: 108 HFIVPELGPEVNFVYSSHKAVEEYKEAKALGVDTVPVLVGPVSYLLLSKAAKGVDKSFDL 167

Query: 61  LSLLGKILPVYKEVISELKEAGASWIQFDEPTLVMDLDSHKLQAFTDAYSELESTLSGLN 120
           LSLL K+L VYKEVI++LK AGA +IQFDEPTLV+DL++HKLQAFTDAY+ L  +  GL+
Sbjct: 168 LSLLPKVLAVYKEVIADLKAAGAQFIQFDEPTLVLDLEAHKLQAFTDAYAALTPSFEGLH 227

Query: 121 VVVETYFADVPAEAFKTLTSLKGVTGYGFDLVRGTKTLDLIKSDFPKGKYLFAGVVDGRN 180
           V+VETYFAD+PAEA+KTLTSL GV  YGFDLVRGTKTLDLIK+ FP GK++FAGVVDGRN
Sbjct: 228 VLVETYFADIPAEAYKTLTSLSGVAAYGFDLVRGTKTLDLIKAGFPSGKWIFAGVVDGRN 287

Query: 181 IWANDLASSLSTLQELEGIVGKDKXXXXXXXXXXHTAVDLVNETKLDQEIKSWLAFAAQK 240
           IWANDL +SLSTL+ L GIVGK++          HTAVDLVNETKLD EIKSWLAFAAQK
Sbjct: 288 IWANDLEASLSTLEALAGIVGKERIVVSTSCSLLHTAVDLVNETKLDDEIKSWLAFAAQK 347

Query: 241 VVEVNALAKALAGEKDEXXXXXXXXXXXXXXXXPRVTNEAVQKAAAALRGSDHRRATNVS 300
           VVEVNALA ALAG KDE                PRVTNEAVQKAAAAL+GSDHRRATNVS
Sbjct: 348 VVEVNALANALAGNKDEAIFSASSAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVS 407

Query: 301 ARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYTKAIKAEINKVVKL 360
           ARLDAQQKKLNLPILPTTTIGSFPQT+ELRRVRRE+KAKKISEEEY KAIK EI  VV+L
Sbjct: 408 ARLDAQQKKLNLPILPTTTIGSFPQTVELRRVRREFKAKKISEEEYIKAIKEEIRSVVEL 467

Query: 361 QEELDIDVLVHGEPERNDMVEYFGEQLSGFVFTVNGWVQSYGSRCVKPPIIYGDVSRPNP 420
           QEELDIDVLVHGEPERNDMVEYFGEQLSGF FT NGWVQSYGSRCVKPPIIYGDVSRP  
Sbjct: 468 QEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKA 527

Query: 421 MTVFWSSTAQSMTARPMKGMLTGPVTILNWSFVRNDQPRF--ETCYQIALAIKDEVEDLE 478
           MTVFWS+ AQS T RPMKGMLTGPVTILNWSFVR DQPR+  +  Y I   ++    + E
Sbjct: 528 MTVFWSALAQSFTKRPMKGMLTGPVTILNWSFVRVDQPRYKLDPPYNITGKVQHTELNKE 587

Query: 479 KAGINVIQI 487
              I++I +
Sbjct: 588 MISIHIIYL 596


>IMGA|Medtr1g007480.1
           5-methyltetrahydropteroyltriglutamate--homocysteine
           methyltransferase, putative
           chr01_pseudomolecule_IMGAG_V3 461527-462556 E
           EGN_Mt090430 20090702
          Length = 165

 Score =  253 bits (645), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 127/169 (75%), Positives = 141/169 (83%), Gaps = 16/169 (9%)

Query: 28  KALGIDTVPVLVGPVSYLLLSKPAKGVEKTFSLLSLLGKILPVYKEVISELKEAGASWIQ 87
           K LG++TVPVLVGPVSYLLLSKPAKGVEK                EV++ELK AGA+WIQ
Sbjct: 5   KVLGVNTVPVLVGPVSYLLLSKPAKGVEK----------------EVVTELKTAGATWIQ 48

Query: 88  FDEPTLVMDLDSHKLQAFTDAYSELESTLSGLNVVVETYFADVPAEAFKTLTSLKGVTGY 147
           FDEPTLV DLD+H+LQAF  AY+ELESTLSGLNV+VETYFADVPAEA+KTLTSLK VT Y
Sbjct: 49  FDEPTLVKDLDAHQLQAFNYAYAELESTLSGLNVLVETYFADVPAEAYKTLTSLKAVTAY 108

Query: 148 GFDLVRGTKTLDLIKSDFPKGKYLFAGVVDGRNIWANDLASSLSTLQEL 196
           GFDLVRGTKTLDLIK  FP GK LFAG+VDGRNIWAN+L SSL+TL+EL
Sbjct: 109 GFDLVRGTKTLDLIKQGFPSGKLLFAGIVDGRNIWANNLESSLNTLKEL 157


>IMGA|Medtr7g103050.4 Methionine synthase, vitamin-B12 independent
           chr07_pseudomolecule_IMGAG_V3 23004854-22999451 E
           EGN_Mt090430 20090702
          Length = 226

 Score =  232 bits (591), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 107/119 (89%), Positives = 109/119 (91%)

Query: 421 MTVFWSSTAQSMTARPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKA 480
           MTVFWS+ AQS T RPMKGMLTGPVTILNWSFVR DQPR ETCYQIALAIKDEVEDLEK 
Sbjct: 1   MTVFWSALAQSFTKRPMKGMLTGPVTILNWSFVRVDQPRSETCYQIALAIKDEVEDLEKG 60

Query: 481 GINVIQIDEAALREGLPLRKSEQAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDI 539
           GI VIQIDEAALREGLPLRKSE A YLDWAVHSFRITN GVQD+TQIHTHMCYSNFNDI
Sbjct: 61  GIGVIQIDEAALREGLPLRKSEHAHYLDWAVHSFRITNVGVQDSTQIHTHMCYSNFNDI 119