Jatropha Genome Database

JcCA0262011.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0262011.10 + phase: 0 
         (174 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g109110.1 Carbohydrate kinase, PfkB; Acyl-CoA dehydro...   284   1e-77

>IMGA|Medtr4g109110.1 Carbohydrate kinase, PfkB; Acyl-CoA
           dehydrogenase C-terminal-like;
           chr04_pseudomolecule_IMGAG_V3 24329162-24322582 E
           EGN_Mt090430 20090702
          Length = 678

 Score =  284 bits (727), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 132/174 (75%), Positives = 160/174 (91%)

Query: 1   MNGPCPVIPSQLTSAILRSSQFQINAFCLRERDLLSRFAAEVSQHQANGESKERAFIMSY 60
           MNG CPVIPSQLTS+ ++SS+FQI+ F LRERDLL RFAAEVS+HQ+ G SKE AFI+SY
Sbjct: 505 MNGSCPVIPSQLTSSTIKSSEFQIDLFHLRERDLLKRFAAEVSEHQSQGNSKESAFILSY 564

Query: 61  QLAEDLGRAFSDRLILQTFIEAETTVSAGSLKNVLGLLRSMYALICLEEDSAFLRYGYLS 120
           QLAEDLGRAFS+R IL+TF+EAE+ + AGSLK+VLGLLRS+YALI ++ED+AFLRYGYLS
Sbjct: 565 QLAEDLGRAFSERAILKTFMEAESALPAGSLKDVLGLLRSLYALISVDEDAAFLRYGYLS 624

Query: 121 TESAAAVRKEVAKLCSELRPHALALVSSFGIPDAFLSPIAFNWIDANSWSSVKH 174
           TE+A+AVRKEV KLC+ELRPHALALV+SFGIPDAFLSPIA+NW+++NSWS+ +H
Sbjct: 625 TENASAVRKEVPKLCAELRPHALALVNSFGIPDAFLSPIAYNWVESNSWSTAQH 678