Jatropha Genome Database

JcCA0261941.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0261941.10 + phase: 1 /partial
         (272 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g032430.1 Peptidase M3A and M3B, thimet/oligopeptidas...   404   e-113
IMGA|Medtr3g103120.1 Peptidase M3A and M3B, thimet/oligopeptidas...    77   9e-15
IMGA|Medtr3g010510.1 Peptidase M3A and M3B, thimet/oligopeptidas...    70   1e-12

>IMGA|Medtr5g032430.1 Peptidase M3A and M3B, thimet/oligopeptidase F
           chr05_pseudomolecule_IMGAG_V3 13137229-13129334 E
           EGN_Mt090430 20090702
          Length = 786

 Score =  404 bits (1039), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 196/249 (78%), Positives = 222/249 (89%), Gaps = 4/249 (1%)

Query: 1   FNKIEQELERLSQKFGENVLDATKKFEKLITDEKEIEGLPXXXXXXXXXXXXXKGHKDAT 60
           FNKIEQELERLS+KFGENVLDATKKFEKLITD+KEIEGLP             KGH++AT
Sbjct: 245 FNKIEQELERLSEKFGENVLDATKKFEKLITDKKEIEGLPATALGLAAQSAVSKGHENAT 304

Query: 61  AENGPWVITLDGPSFMSVMQHARNRDLREEVYRAYVTRASSGDLDNTPIIDQIVKLRLEK 120
           AENGPWVITLD PS+++VMQHARNR LREEVYRAY+TRASSGDLDNT +I+QI+KLRLEK
Sbjct: 305 AENGPWVITLDAPSYIAVMQHARNRSLREEVYRAYLTRASSGDLDNTKLIEQILKLRLEK 364

Query: 121 AKLLNYNNYAEVSMATKMATVEKAEELLEKLRSASWDAAVRDMEDLKIFSKNQGAVEAND 180
           AKLLNYNNYAEVSMATKMATV+KAEELLEKLR ASWDAAV+DMEDLK FSK+QGA+EA+D
Sbjct: 365 AKLLNYNNYAEVSMATKMATVDKAEELLEKLRKASWDAAVQDMEDLKKFSKDQGALEADD 424

Query: 181 LSHWDISFWAERLRESRYDINEEELRPYFSLPKVMDGLFNLAKNLFGIDIEPADGLAPV- 239
           L+HWD+SFW+ERLRES+YDINEEELRP+FSLP VMDGLF+LAK LFGI+IE ADGLAPV 
Sbjct: 425 LTHWDVSFWSERLRESKYDINEEELRPFFSLPNVMDGLFDLAKTLFGIEIESADGLAPVW 484

Query: 240 ---IYYTCI 245
              + + C+
Sbjct: 485 NNDVKFFCV 493


>IMGA|Medtr3g103120.1 Peptidase M3A and M3B, thimet/oligopeptidase F
           chr03_pseudomolecule_IMGAG_V3 25310034-25300404 E
           EGN_Mt090430 20090702
          Length = 708

 Score = 77.0 bits (188), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 114/234 (48%), Gaps = 20/234 (8%)

Query: 3   KIEQELERLSQKFGENVLDATKKFEKLITDEKEIEGLPXXXXXXXXXXXXXKGHKDATAE 62
           +I+ +++ LS  + +N+ DA+     L  +E E+ GLP             KG     +E
Sbjct: 199 RIKAQIDELSIIYIQNLNDASAF---LPFNESELAGLPPEFL---------KGLD--KSE 244

Query: 63  NGPWVITLDGPSFMSVMQHARNRDLREEVYRAYVTRASSGDLDNTPIIDQIVKLRLEKAK 122
           NG   I+L      +V++  +    R  V RAY  R    +L    I++ +V+ R + A+
Sbjct: 245 NGQLKISLRSHHVTAVLEFCKVGTTRRMVSRAYGNRCGEANLS---ILESLVQQRHKYAR 301

Query: 123 LLNYNNYAEVSMATKMA-TVEKAEELLEKLRSASWDAAVRDMEDLKIFSKNQGAVEANDL 181
           LL Y+ YAE ++  +MA T  K  E L  +     D A ++++ LK   K +       +
Sbjct: 302 LLGYSCYAEYAVDVRMAKTPTKVFEFLNDISVRVTDMATKELDVLKDLKKKEEGEFPFGI 361

Query: 182 SHWDISFWAERLRESRYDINEEELRPYFSLPKVMDGLFNLAKNLFGIDIEPADG 235
              D+ ++ +R+ E  YD++  E++ Y  +  V+ G+F + ++LFG+  E   G
Sbjct: 362 E--DLLYYVKRVEEQSYDLDFGEIKQYLPIGLVLSGIFKIVQDLFGLRFEEIAG 413


>IMGA|Medtr3g010510.1 Peptidase M3A and M3B, thimet/oligopeptidase F
           chr03_pseudomolecule_IMGAG_V3 1848139-1858822 E
           EGN_Mt090430 20090702
          Length = 719

 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 96/197 (48%), Gaps = 15/197 (7%)

Query: 57  KDATAENGPWVITLDGPSFMSVMQHARNRDLREEVYRAYVTRASSGDLDNTPIIDQIVKL 116
           KD   E G + IT D  +  SV+Q + + ++R+ VY     +A+S    N  ++ +++  
Sbjct: 231 KDTVKEKG-FRITTDPRTLDSVLQLSSDDEIRKMVY----IQANSVPHANVDVLKRLISA 285

Query: 117 RLEKAKLLNYNNYAEVSMATKMATVEKAEELLEKLRSASWDAAVRDMEDLKI---FSKNQ 173
           R E+A++L   +YAE+++ + MA+  K   ++  L   S     +  E+L +   F + +
Sbjct: 286 RHEQAQILGCGSYAELAVKSNMASSPKV--VMSFLHEMSKMVQAKSTEELNLLTKFKREK 343

Query: 174 GAVEANDLSHWDISFWAERLRESRYDINEEELRPYFSLPKVMDGLFNLAKNLFG-----I 228
                 DL  WD +++   ++ S Y ++      YFSL   ++GL  L  +LFG     I
Sbjct: 344 CGQNNGDLRPWDEAYYTTMMKSSVYKLDSLVAASYFSLSNCIEGLKVLVNSLFGVICHRI 403

Query: 229 DIEPADGLAPVIYYTCI 245
            + P +   P +   C+
Sbjct: 404 PLAPGESWDPQVLKLCL 420