Jatropha Genome Database

JcCA0261101.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0261101.10 - phase: 0 /partial
         (475 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g149700.1 Beige/BEACH; Concanavalin A-like lectin/glu...    71   1e-12
IMGA|AC233070_6.1 Beige/BEACH AC233070.4 19067-26890 H EGN_Mt090...    67   2e-11
IMGA|Medtr8g151160.1 Beige/BEACH chr08_pseudomolecule_IMGAG_V3 3...    67   2e-11
IMGA|Medtr1g083680.1 Beige/BEACH; Concanavalin A-like lectin/glu...    63   3e-10

>IMGA|Medtr3g149700.1 Beige/BEACH; Concanavalin A-like
            lectin/glucanase; WD40-like chr03_pseudomolecule_IMGAG_V3
            39220300-39249784 E EGN_Mt090430 20090702
          Length = 3289

 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 58/102 (56%), Gaps = 14/102 (13%)

Query: 1    MANLAVPSWA-SSPEEFIKLHRDALESERVSCQIHHWIDITFGYKMSGQAAVAAKNVM-- 57
            + ++ +P W+  SPEEFI+ +R+ALESE VS  +HHWID+ FGYK  G+ AV A N+   
Sbjct: 2808 IGDVFLPPWSKGSPEEFIRRNREALESEYVSSNLHHWIDLVFGYKQRGKPAVEAANIFYY 2867

Query: 58   --------LPSSEPTMPRPVGRRQLFTRPH-PVRLGSLRKKH 90
                    L ++E  + R     Q+      P+++   RKKH
Sbjct: 2868 LTYEGAVDLETTEDDLQRAAIEDQIANFGQTPIQM--FRKKH 2907


>IMGA|AC233070_6.1 Beige/BEACH AC233070.4 19067-26890 H EGN_Mt090430
           20090702
          Length = 647

 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 39/58 (67%)

Query: 1   MANLAVPSWASSPEEFIKLHRDALESERVSCQIHHWIDITFGYKMSGQAAVAAKNVML 58
           + ++ +P+WA +P +F+  HR ALESE VS  +H WID+ FGYK  G+ A+ A NV  
Sbjct: 100 LDSVRLPAWAENPVDFVHKHRMALESEYVSAHLHEWIDLIFGYKQQGKEAIEADNVFF 157


>IMGA|Medtr8g151160.1 Beige/BEACH chr08_pseudomolecule_IMGAG_V3
           37197772-37205809 H EGN_Mt090430 20090702
          Length = 636

 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 39/58 (67%)

Query: 1   MANLAVPSWASSPEEFIKLHRDALESERVSCQIHHWIDITFGYKMSGQAAVAAKNVML 58
           + ++ +P+WA +P +F+  HR ALESE VS  +H WID+ FGYK  G+ A+ A NV  
Sbjct: 89  LDSVRLPAWAENPVDFVHKHRMALESEYVSAHLHEWIDLIFGYKQQGKEAIEADNVFF 146


>IMGA|Medtr1g083680.1 Beige/BEACH; Concanavalin A-like
            lectin/glucanase chr01_pseudomolecule_IMGAG_V3
            16577672-16559788 E EGN_Mt090430 20090702
          Length = 3612

 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 1/58 (1%)

Query: 1    MANLAVPSWA-SSPEEFIKLHRDALESERVSCQIHHWIDITFGYKMSGQAAVAAKNVM 57
            + ++ +P WA  S  EFI  HR+ALES+ VS  +HHWID+ FGYK  G+AA  + NV 
Sbjct: 3172 VGDVMLPPWAKGSAREFISKHREALESDFVSENLHHWIDLIFGYKQRGKAAEESVNVF 3229