Jatropha Genome Database

JcCA0260771.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0260771.10 + phase: 0 /partial
         (277 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g101240.1 Bacterial trigger factor, C-terminal chr05_...   452   e-128

>IMGA|Medtr5g101240.1 Bacterial trigger factor, C-terminal
           chr05_pseudomolecule_IMGAG_V3 40502851-40507905 E
           EGN_Mt090430 20090702
          Length = 561

 Score =  452 bits (1163), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 209/276 (75%), Positives = 255/276 (92%)

Query: 1   IGDVAVLDISATKVDEDNSSINIPDAESKGFHFDTEDGDKVLPGFLDSIIGMQRGETKSF 60
           +GDV VLDISAT VD++++  NIP AESKGF+FDTED + ++PGFLDSIIG+ RGETKSF
Sbjct: 285 VGDVVVLDISATTVDQESNIKNIPSAESKGFNFDTEDSEILVPGFLDSIIGIGRGETKSF 344

Query: 61  PLVFPESWNQENLRGVQAQFTVECKELFYRDMPELDDSLADKLLPGCTTLQQVKESLLQK 120
           PLVFPE+W QENL+GV AQFTVECKELFYRD+PELDDS+ADKL+PGCTT+QQVK+ LL++
Sbjct: 345 PLVFPETWKQENLQGVHAQFTVECKELFYRDLPELDDSIADKLIPGCTTVQQVKDLLLER 404

Query: 121 CQEVERTARDQATDNAILDQLHKMVEIDIPRSLFEEQGRQFYGAKLLEVQAKMKLNEEQL 180
            QE+E+TAR+QATDNAILDQ+ KMVE+DIP+SLF+EQGRQ YG+ LLE+Q K+KL+E+QL
Sbjct: 405 FQEIEQTAREQATDNAILDQISKMVEVDIPQSLFDEQGRQLYGSSLLEMQTKIKLSEQQL 464

Query: 181 ASLSSPKAVNEYLENQKQNITKVIKQNLAVGDIFKRENLEFSTDDLVKEVENSISEFKRH 240
           A+LSSPKAVNEYLE+ ++NIT +IKQNLAVGDI+KREN++  T+D+VKEVENSI+EFKR 
Sbjct: 465 ATLSSPKAVNEYLEHHRENITNLIKQNLAVGDIYKRENMQLPTEDIVKEVENSIAEFKRQ 524

Query: 241 KQEYDEERVRDQVQEILEGAKVLEWLKEHAEIQYIT 276
           KQEYDEERV++QVQEILEGAKVLEWL+EHAE+QYIT
Sbjct: 525 KQEYDEERVKEQVQEILEGAKVLEWLREHAEVQYIT 560