Jatropha Genome Database

JcCA0259921.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0259921.10 - phase: 0 /partial
         (220 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|AC147501_23.1 Fatty acid hydroxylase AC147501.9 90999-82625...   360   e-100
IMGA|AC147501_23.2 Fatty acid hydroxylase AC147501.9 87192-82625...   358   e-100
IMGA|AC147501_23.3 hypothetical protein AC147501.9 90999-85865 E...    62   3e-10

>IMGA|AC147501_23.1 Fatty acid hydroxylase AC147501.9 90999-82625 E
           EGN_Mt090430 20090702
          Length = 304

 Score =  360 bits (925), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 169/219 (77%), Positives = 190/219 (86%)

Query: 1   VGHLGEAYEEWVHQPIVSKEGPRFFESDFWEFLTRTVWWAIPVIWLPVVCWCISMSVRMG 60
           VGHLGEAYEEWVHQPIVSKEGPRFF+++  E LT TVWWAIPVIWLPVVCW +  S++MG
Sbjct: 85  VGHLGEAYEEWVHQPIVSKEGPRFFQNEVLESLTLTVWWAIPVIWLPVVCWFVYNSIQMG 144

Query: 61  HKPSEIALMVASGILIWTLLEYSLHRFVFHIKTKTYWWNTLHYLIHGCHHKHPMDGLRLV 120
                IALMV  GI +WTLLEY+LHRF+FHIKTKTYW NT+HYL+HGCHHKHPMDGLRLV
Sbjct: 145 LSCPHIALMVVLGIFVWTLLEYTLHRFLFHIKTKTYWGNTIHYLLHGCHHKHPMDGLRLV 204

Query: 121 FPPAATAVLCVPFWNLVQLFATPSTAPALFGGGLLGYVMYDCTHYYLHHGQPSSGVPKDL 180
           FPP ATA+L  PFWN V+LF+TPST PALFGGGLLGYV+YDCTHYYLHHGQP +  P++L
Sbjct: 205 FPPTATAILLFPFWNAVKLFSTPSTTPALFGGGLLGYVIYDCTHYYLHHGQPKTEHPRNL 264

Query: 181 KKYHLNHHFRIQNMGFGITSALWDRVFGTLPPSKVVEKS 219
           KKYHLNHHFRIQ+ GFGITS+LWD+VFGTLP SK   KS
Sbjct: 265 KKYHLNHHFRIQDKGFGITSSLWDKVFGTLPSSKADAKS 303


>IMGA|AC147501_23.2 Fatty acid hydroxylase AC147501.9 87192-82625 E
           EGN_Mt090430 20090702
          Length = 237

 Score =  358 bits (920), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 169/219 (77%), Positives = 190/219 (86%)

Query: 1   VGHLGEAYEEWVHQPIVSKEGPRFFESDFWEFLTRTVWWAIPVIWLPVVCWCISMSVRMG 60
           VGHLGEAYEEWVHQPIVSKEGPRFF+++  E LT TVWWAIPVIWLPVVCW +  S++MG
Sbjct: 18  VGHLGEAYEEWVHQPIVSKEGPRFFQNEVLESLTLTVWWAIPVIWLPVVCWFVYNSIQMG 77

Query: 61  HKPSEIALMVASGILIWTLLEYSLHRFVFHIKTKTYWWNTLHYLIHGCHHKHPMDGLRLV 120
                IALMV  GI +WTLLEY+LHRF+FHIKTKTYW NT+HYL+HGCHHKHPMDGLRLV
Sbjct: 78  LSCPHIALMVVLGIFVWTLLEYTLHRFLFHIKTKTYWGNTIHYLLHGCHHKHPMDGLRLV 137

Query: 121 FPPAATAVLCVPFWNLVQLFATPSTAPALFGGGLLGYVMYDCTHYYLHHGQPSSGVPKDL 180
           FPP ATA+L  PFWN V+LF+TPST PALFGGGLLGYV+YDCTHYYLHHGQP +  P++L
Sbjct: 138 FPPTATAILLFPFWNAVKLFSTPSTTPALFGGGLLGYVIYDCTHYYLHHGQPKTEHPRNL 197

Query: 181 KKYHLNHHFRIQNMGFGITSALWDRVFGTLPPSKVVEKS 219
           KKYHLNHHFRIQ+ GFGITS+LWD+VFGTLP SK   KS
Sbjct: 198 KKYHLNHHFRIQDKGFGITSSLWDKVFGTLPSSKADAKS 236


>IMGA|AC147501_23.3 hypothetical protein AC147501.9 90999-85865 E
           EGN_Mt090430 20090702
          Length = 118

 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 26/31 (83%), Positives = 29/31 (93%)

Query: 1   VGHLGEAYEEWVHQPIVSKEGPRFFESDFWE 31
           VGHLGEAYEEWVHQPIVSKEGPRFF+++  E
Sbjct: 85  VGHLGEAYEEWVHQPIVSKEGPRFFQNEVLE 115