Jatropha Genome Database

JcCA0259651.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0259651.10 + phase: 2 /pseudo/partial
         (377 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|AC225517_26.1 Quinonprotein alcohol dehydrogenase-like AC22...   280   9e-76
IMGA|AC225507_10.1 Quinonprotein alcohol dehydrogenase-like AC22...   280   9e-76

>IMGA|AC225517_26.1 Quinonprotein alcohol dehydrogenase-like
           AC225517.6 112314-118182 E EGN_Mt090430 20090702
          Length = 764

 Score =  280 bits (716), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 141/245 (57%), Positives = 176/245 (71%)

Query: 1   LNAKNGELLKHESAAFSGGFSGEXXXXXXXXXXXXXXXXXTLITVNFQNGDINFQKTYIS 60
           +NAK+GELLK+   A     SGE                  ++T++  NG+IN+ +  +S
Sbjct: 206 VNAKSGELLKNNHVALPFATSGESLSVSGDKFVVLDDVRSKIVTIDINNGNINYNQKQVS 265

Query: 61  DLIEDPLGTVKILPSKLTGMFTLTINSFTIFIRVISEGKLEVVDKINHVTAVSDALSFSE 120
           DLI+D  G   ILPSKL G+F L INS  + I+V +EG+L  +D+I++  A S+ALS SE
Sbjct: 266 DLIKDSSGQAVILPSKLPGLFALKINSQVLLIKVTNEGELVALDQIDNTAAFSNALSISE 325

Query: 121 GQQAFALIEHQDNDIYLIVKLGHDWNNDLLKERIKIDHQRGLVHKVFINNYIRTDRSHGF 180
            Q  FA ++++DN I L VK  +DWN  LLKE + IDHQRG + K+FINNY+RTDRSHGF
Sbjct: 326 DQHVFAFVQYEDNKIQLSVKDVNDWNGALLKENLVIDHQRGNIEKIFINNYVRTDRSHGF 385

Query: 181 RALIVMEDHSLLLLQQGETVWSREDGLASIVDVTISELPVEKKGVSVAKVEQNLFEWLKG 240
           RAL+VMEDHSLLL+QQGE VWSREDGLAS+VDVT SELPVEK+GVSVAKVEQNLFEWLKG
Sbjct: 386 RALMVMEDHSLLLVQQGEIVWSREDGLASVVDVTTSELPVEKEGVSVAKVEQNLFEWLKG 445

Query: 241 RNLVL 245
             L L
Sbjct: 446 HVLKL 450


>IMGA|AC225507_10.1 Quinonprotein alcohol dehydrogenase-like
           AC225507.11 42826-45926 E EGN_Mt090430 20090702
          Length = 630

 Score =  280 bits (716), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 141/245 (57%), Positives = 176/245 (71%)

Query: 1   LNAKNGELLKHESAAFSGGFSGEXXXXXXXXXXXXXXXXXTLITVNFQNGDINFQKTYIS 60
           +NAK+GELLK+   A     SGE                  ++T++  NG+IN+ +  +S
Sbjct: 72  VNAKSGELLKNNHVALPFATSGESLSVSGDKFVVLDDVRSKIVTIDINNGNINYNQKQVS 131

Query: 61  DLIEDPLGTVKILPSKLTGMFTLTINSFTIFIRVISEGKLEVVDKINHVTAVSDALSFSE 120
           DLI+D  G   ILPSKL G+F L INS  + I+V +EG+L  +D+I++  A S+ALS SE
Sbjct: 132 DLIKDSSGQAVILPSKLPGLFALKINSQVLLIKVTNEGELVALDQIDNTAAFSNALSISE 191

Query: 121 GQQAFALIEHQDNDIYLIVKLGHDWNNDLLKERIKIDHQRGLVHKVFINNYIRTDRSHGF 180
            Q  FA ++++DN I L VK  +DWN  LLKE + IDHQRG + K+FINNY+RTDRSHGF
Sbjct: 192 DQHVFAFVQYEDNKIQLSVKDVNDWNGALLKENLVIDHQRGNIEKIFINNYVRTDRSHGF 251

Query: 181 RALIVMEDHSLLLLQQGETVWSREDGLASIVDVTISELPVEKKGVSVAKVEQNLFEWLKG 240
           RAL+VMEDHSLLL+QQGE VWSREDGLAS+VDVT SELPVEK+GVSVAKVEQNLFEWLKG
Sbjct: 252 RALMVMEDHSLLLVQQGEIVWSREDGLASVVDVTTSELPVEKEGVSVAKVEQNLFEWLKG 311

Query: 241 RNLVL 245
             L L
Sbjct: 312 HVLKL 316