Jatropha Genome Database

JcCA0258491.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0258491.10 - phase: 0 /partial
         (219 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g089770.1 Cytidylyltransferase chr04_pseudomolecule_I...   327   3e-90
IMGA|Medtr4g084450.1 Cytidylyltransferase chr04_pseudomolecule_I...   162   1e-40
IMGA|Medtr4g089770.2 Cytidylyltransferase chr04_pseudomolecule_I...   131   3e-31
IMGA|Medtr4g161000.1 Cytidylyltransferase chr04_pseudomolecule_I...   118   2e-27
IMGA|Medtr7g081050.1 Cytidylyltransferase chr07_pseudomolecule_I...   109   1e-24
IMGA|Medtr7g081050.2 Cytidylyltransferase chr07_pseudomolecule_I...   109   1e-24
IMGA|Medtr4g084440.1 Choline-phosphate cytidylyltransferase B, r...    88   4e-18
IMGA|Medtr4g161000.2 hypothetical protein chr04_pseudomolecule_I...    58   4e-09

>IMGA|Medtr4g089770.1 Cytidylyltransferase
           chr04_pseudomolecule_IMGAG_V3 18782117-18786930 F
           EGN_Mt090430 20090702
          Length = 285

 Score =  327 bits (838), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 151/172 (87%), Positives = 161/172 (93%)

Query: 31  VRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDEITHKYKGKTVMTESERYESL 90
           VRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCC+DEITHKYKGKTVM E ERYESL
Sbjct: 16  VRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCSDEITHKYKGKTVMNEQERYESL 75

Query: 91  HHCKWVDEVITDAPWVITQEFLDKHNIDYVAHDSLPYADASGAGKDVYEFVKKVGRFKET 150
            HCKWVDEVI D PWVI QEF+DKH IDYVAHD+LPYAD SGAG DVYEFVK +G+FKET
Sbjct: 76  RHCKWVDEVIPDVPWVINQEFIDKHKIDYVAHDALPYADTSGAGNDVYEFVKAIGKFKET 135

Query: 151 KRTDGISTSDIIMRIVKDYNQYVMRNLDRGYTRKELGVSFVKEKRLRVNMRL 202
           KRT+GISTSDIIMRI+KDYNQYVMRNLDRGY+RKELGVS+VKEKRLR+NM L
Sbjct: 136 KRTEGISTSDIIMRIIKDYNQYVMRNLDRGYSRKELGVSYVKEKRLRMNMGL 187


>IMGA|Medtr4g084450.1 Cytidylyltransferase
           chr04_pseudomolecule_IMGAG_V3 17752517-17751148 E
           EGN_Mt090430 20090702
          Length = 341

 Score =  162 bits (411), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 82/123 (66%), Positives = 88/123 (71%), Gaps = 21/123 (17%)

Query: 31  VRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDEITHKYKGKTVMTESERYESL 90
           V VYADGIYDLFHFGHARSLEQ++               EI  KY         ERYESL
Sbjct: 16  VHVYADGIYDLFHFGHARSLEQSQ---------------EIVSKY------ILQERYESL 54

Query: 91  HHCKWVDEVITDAPWVITQEFLDKHNIDYVAHDSLPYADASGAGKDVYEFVKKVGRFKET 150
            HCKWVDEVI D PWVI QEF+DKH IDYVA D+LPYAD SGAGKDVYEFVK +G+FKET
Sbjct: 55  RHCKWVDEVIPDVPWVINQEFIDKHKIDYVAQDALPYADTSGAGKDVYEFVKAIGKFKET 114

Query: 151 KRT 153
           KRT
Sbjct: 115 KRT 117


>IMGA|Medtr4g089770.2 Cytidylyltransferase
          chr04_pseudomolecule_IMGAG_V3 18782117-18783607 F
          EGN_Mt090430 20090702
          Length = 90

 Score =  131 bits (329), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 60/64 (93%), Positives = 61/64 (95%)

Query: 31 VRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDEITHKYKGKTVMTESERYESL 90
          VRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCC+DEITHKYKGKTVM E ERYESL
Sbjct: 16 VRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCSDEITHKYKGKTVMNEQERYESL 75

Query: 91 HHCK 94
           HCK
Sbjct: 76 RHCK 79


>IMGA|Medtr4g161000.1 Cytidylyltransferase
           chr04_pseudomolecule_IMGAG_V3 41001899-40997817 E
           EGN_Mt090430 20090702
          Length = 418

 Score =  118 bits (296), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 65/145 (44%), Positives = 87/145 (60%), Gaps = 8/145 (5%)

Query: 31  VRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDEITHKYKGKTVMTESERYESL 90
           VRVY DG +DL H+GHA +L QAK       L+VG  +DE     KG  V++  ER   +
Sbjct: 65  VRVYMDGCFDLMHYGHANALRQAKAL--GDELVVGLVSDEEIVANKGPPVLSMDERLALV 122

Query: 91  HHCKWVDEVITDAPWVITQEFLDK----HNIDYVAHDSLPYADASGAGKDVYEFVKKVGR 146
              KWVDEVITDAP+ IT+ FL++    +NIDYV H   P     G   D Y   KK GR
Sbjct: 123 SGLKWVDEVITDAPYAITETFLNRLFHEYNIDYVIHGDDPCLLPDGT--DAYAAAKKAGR 180

Query: 147 FKETKRTDGISTSDIIMRIVKDYNQ 171
           +K+ KRT+G+S++DI+ RI+    +
Sbjct: 181 YKQIKRTEGVSSTDIVGRIMSSLKE 205



 Score = 87.0 bits (214), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 87/155 (56%), Gaps = 7/155 (4%)

Query: 33  VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDEITHKYKGK--TVMTESERYESL 90
           VY DG +DLFH GH + L++A++     +LLVG  +DE   + +G    +M   ER  S+
Sbjct: 256 VYIDGAFDLFHAGHVQMLKRAREL--GDFLLVGIHSDETVSENRGNHYPIMHLHERSLSV 313

Query: 91  HHCKWVDEVITDAPWVITQEFLDKHNIDYVAHDSLPYADAS-GAGKDVYEFVKKVGRFKE 149
              ++VDEVI  AP  IT++ +   NI  V H ++  A+ S  + KD YE  K +G F+ 
Sbjct: 314 LASRYVDEVIIGAPLEITKDMITTFNISLVVHGTV--AEKSLPSEKDPYEVPKSIGIFRL 371

Query: 150 TKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYTRK 184
            +    I+T+ +  RI+ +++ YV RN  +  + K
Sbjct: 372 LESPKDITTTSVAQRIMANHDAYVKRNAKKAKSEK 406


>IMGA|Medtr7g081050.1 Cytidylyltransferase
           chr07_pseudomolecule_IMGAG_V3 17421819-17413564 E
           EGN_Mt090430 20090702
          Length = 419

 Score =  109 bits (272), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 57/140 (40%), Positives = 84/140 (60%), Gaps = 8/140 (5%)

Query: 31  VRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDEITHKYKGKTVMTESERYESL 90
           +RVY DG +D+ H+GH  +L QA+       L+VG  +D+     KG  V    ER   +
Sbjct: 52  IRVYMDGCFDMMHYGHCNALRQARAL--GDQLIVGVVSDDEIIANKGPPVTPLHERLIMV 109

Query: 91  HHCKWVDEVITDAPWVITQEFL----DKHNIDYVAHDSLPYADASGAGKDVYEFVKKVGR 146
           +  KWVDEVI +AP+ IT+EF+    D++NIDY+ H   P     G   D Y   KK GR
Sbjct: 110 NAVKWVDEVIPEAPYAITEEFMKKLFDEYNIDYIIHGDDPCVLPDGT--DAYAHAKKAGR 167

Query: 147 FKETKRTDGISTSDIIMRIV 166
           +K+ KRT+G+S++DI+ R++
Sbjct: 168 YKQIKRTEGVSSTDIVGRML 187



 Score = 67.8 bits (164), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 4/94 (4%)

Query: 33  VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDEITHKYKG--KTVMTESERYESL 90
           VY DG +DLFH GH   L  A+      +LLVG   D+     +G  + +M+  ER  S+
Sbjct: 255 VYIDGAFDLFHAGHVEILRLARDR--GDFLLVGIHTDQTVSATRGLHRPIMSLHERSLSV 312

Query: 91  HHCKWVDEVITDAPWVITQEFLDKHNIDYVAHDS 124
             C++VDEVI  APW ++++ +   NI  V H +
Sbjct: 313 LACRYVDEVIIGAPWEVSKDMITTFNISLVVHGT 346


>IMGA|Medtr7g081050.2 Cytidylyltransferase
           chr07_pseudomolecule_IMGAG_V3 17421819-17416592 E
           EGN_Mt090430 20090702
          Length = 355

 Score =  109 bits (272), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 57/140 (40%), Positives = 84/140 (60%), Gaps = 8/140 (5%)

Query: 31  VRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDEITHKYKGKTVMTESERYESL 90
           +RVY DG +D+ H+GH  +L QA+       L+VG  +D+     KG  V    ER   +
Sbjct: 52  IRVYMDGCFDMMHYGHCNALRQARAL--GDQLIVGVVSDDEIIANKGPPVTPLHERLIMV 109

Query: 91  HHCKWVDEVITDAPWVITQEFL----DKHNIDYVAHDSLPYADASGAGKDVYEFVKKVGR 146
           +  KWVDEVI +AP+ IT+EF+    D++NIDY+ H   P     G   D Y   KK GR
Sbjct: 110 NAVKWVDEVIPEAPYAITEEFMKKLFDEYNIDYIIHGDDPCVLPDGT--DAYAHAKKAGR 167

Query: 147 FKETKRTDGISTSDIIMRIV 166
           +K+ KRT+G+S++DI+ R++
Sbjct: 168 YKQIKRTEGVSSTDIVGRML 187



 Score = 60.8 bits (146), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 4/82 (4%)

Query: 33  VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDEITHKYKG--KTVMTESERYESL 90
           VY DG +DLFH GH   L  A+      +LLVG   D+     +G  + +M+  ER  S+
Sbjct: 255 VYIDGAFDLFHAGHVEILRLARDR--GDFLLVGIHTDQTVSATRGLHRPIMSLHERSLSV 312

Query: 91  HHCKWVDEVITDAPWVITQEFL 112
             C++VDEVI  APW ++++ +
Sbjct: 313 LACRYVDEVIIGAPWEVSKDMV 334


>IMGA|Medtr4g084440.1 Choline-phosphate cytidylyltransferase B,
           related chr04_pseudomolecule_IMGAG_V3 17750837-17750151
           E EGN_Mt090430 20090702
          Length = 193

 Score = 87.8 bits (216), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 42/48 (87%), Positives = 46/48 (95%)

Query: 155 GISTSDIIMRIVKDYNQYVMRNLDRGYTRKELGVSFVKEKRLRVNMRL 202
           GISTSDIIMRI+KDYNQYVMRNLD GY+RKELGVS+VKEKRLR+NM L
Sbjct: 48  GISTSDIIMRIIKDYNQYVMRNLDCGYSRKELGVSYVKEKRLRMNMGL 95


>IMGA|Medtr4g161000.2 hypothetical protein
           chr04_pseudomolecule_IMGAG_V3 40999896-40997817 E
           EGN_Mt090430 20090702
          Length = 115

 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 56/101 (55%), Gaps = 3/101 (2%)

Query: 85  ERYESLHHCKWVDEVITDAPWVITQEFLDKHNIDYVAHDSLPYADAS-GAGKDVYEFVKK 143
           ER  S+   ++VDEVI  AP  IT++ +   NI  V H ++  A+ S  + KD YE  K 
Sbjct: 5   ERSLSVLASRYVDEVIIGAPLEITKDMITTFNISLVVHGTV--AEKSLPSEKDPYEVPKS 62

Query: 144 VGRFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYTRK 184
           +G F+  +    I+T+ +  RI+ +++ YV RN  +  + K
Sbjct: 63  IGIFRLLESPKDITTTSVAQRIMANHDAYVKRNAKKAKSEK 103